RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 PRR23CQ6ZRP0 262 aa8.18□□□□□ -1.1
CHD1-206ENST00000511067 Q8N3U1 123 aa8.18□□□□□ -1.1
CHD1-206ENST00000511067 SYNPOQ8N3V7 929 aa8.18□□□□□ -1.1
CHD1-206ENST00000511067 ZNF513Q8N8E2 541 aaPredicted RBP8.18□□□□□ -1.1
CHD1-206ENST00000511067 ZBTB38Q8NAP3 1195 aaPredicted RBP8.18□□□□□ -1.1
CHD1-206ENST00000511067 TP53INP1Q96A56 240 aa8.18□□□□□ -1.1
CHD1-206ENST00000511067 TBC1D32Q96NH3 1257 aa8.18□□□□□ -1.1
CHD1-206ENST00000511067 SLC26A8Q96RN1 970 aa8.18□□□□□ -1.1
CHD1-206ENST00000511067 KANSL2Q9H9L4 492 aa8.18□□□□□ -1.1
CHD1-206ENST00000511067 GP6Q9HCN6 339 aa8.18□□□□□ -1.1
CHD1-206ENST00000511067 FANCLQ9NW38 375 aa8.18□□□□□ -1.1
CHD1-206ENST00000511067 KCNH3Q9ULD8 1083 aa8.18□□□□□ -1.1
CHD1-206ENST00000511067 ZNF451Q9Y4E5 1061 aa8.18□□□□□ -1.1
CHD1-206ENST00000511067 PTCH2Q9Y6C5 1203 aa8.18□□□□□ -1.1
CHD1-206ENST00000511067 HMX2A2RU54 273 aa8.17□□□□□ -1.1
CHD1-206ENST00000511067 ADCY3O60266 1144 aa8.17□□□□□ -1.1
CHD1-206ENST00000511067 LEFTY1O75610 366 aa8.17□□□□□ -1.1
CHD1-206ENST00000511067 NCLP19338 710 aaKnown RBP8.17□□□□□ -1.1
CHD1-206ENST00000511067 TMEM67Q5HYA8 995 aa8.17□□□□□ -1.1
CHD1-206ENST00000511067 FAM214BQ7L5A3 538 aa8.17□□□□□ -1.1
CHD1-206ENST00000511067 CRACR2BQ8N4Y2 399 aaPredicted RBP8.17□□□□□ -1.1
CHD1-206ENST00000511067 RCC1LQ96I51 464 aaKnown RBP8.17□□□□□ -1.1
CHD1-206ENST00000511067 APEX2Q9UBZ4 518 aa8.17□□□□□ -1.1
CHD1-206ENST00000511067 FHOD1Q9Y613 1164 aa8.17□□□□□ -1.1
CHD1-206ENST00000511067 CCDC163A0A0D9SF12 145 aa8.16□□□□□ -1.1
CHD1-206ENST00000511067 ESYT3A0FGR9 886 aa8.16□□□□□ -1.1
CHD1-206ENST00000511067 H2AFB1P0C5Y9 115 aa8.16□□□□□ -1.1
CHD1-206ENST00000511067 H2AFB2P0C5Z0 115 aa8.16□□□□□ -1.1
CHD1-206ENST00000511067 ZNF865P0CJ78 1059 aaPredicted RBP8.16□□□□□ -1.1
CHD1-206ENST00000511067 ADMP35318 185 aa8.16□□□□□ -1.1
CHD1-206ENST00000511067 RNF43Q68DV7 783 aa8.16□□□□□ -1.1
CHD1-206ENST00000511067 DTWD2Q8NBA8 298 aa8.16□□□□□ -1.1
CHD1-206ENST00000511067 PIWIL2Q8TC59 973 aaKnown RBP8.16□□□□□ -1.1
CHD1-206ENST00000511067 TMX1Q9H3N1 280 aa8.16□□□□□ -1.1
CHD1-206ENST00000511067 CWC22Q9HCG8 908 aaKnown RBP8.16□□□□□ -1.1
CHD1-206ENST00000511067 LEMD3Q9Y2U8 911 aa8.16□□□□□ -1.1
CHD1-206ENST00000511067 SBNO2Q9Y2G9 1366 aa8.15□□□□□ -1.1
CHD1-206ENST00000511067 A0A1W2PQU0 124 aa8.15□□□□□ -1.1
CHD1-206ENST00000511067 GSC2O15499 205 aa8.15□□□□□ -1.1
CHD1-206ENST00000511067 FAM153BP0C7A2 387 aa8.15□□□□□ -1.1
CHD1-206ENST00000511067 HSP90AA2PQ14568 343 aaPredicted RBP8.15□□□□□ -1.1
CHD1-206ENST00000511067 CPSF6Q16630 551 aaKnown RBP eCLIP8.15□□□□□ -1.1
CHD1-206ENST00000511067 POMZP3Q6PJE2 187 aa8.15□□□□□ -1.1
CHD1-206ENST00000511067 C16orf86Q6ZW13 317 aa8.15□□□□□ -1.1
CHD1-206ENST00000511067 ADAT2Q7Z6V5 191 aaKnown RBP8.15□□□□□ -1.1
CHD1-206ENST00000511067 ZNF227Q86WZ6 799 aa8.15□□□□□ -1.1
CHD1-206ENST00000511067 BVESQ8NE79 360 aa8.15□□□□□ -1.1
CHD1-206ENST00000511067 SYTL5Q8TDW5 730 aaPredicted RBP8.15□□□□□ -1.1
CHD1-206ENST00000511067 FGD4Q96M96 766 aa8.15□□□□□ -1.1
CHD1-206ENST00000511067 LRP2BPQ9P2M1 347 aa8.15□□□□□ -1.1
CHD1-206ENST00000511067 FBXL21Q9UKT6 434 aa8.15□□□□□ -1.1
CHD1-206ENST00000511067 SUGT1Q9Y2Z0 365 aa8.15□□□□□ -1.1
CHD1-206ENST00000511067 ANKRD62A6NC57 917 aa8.14□□□□□ -1.11
CHD1-206ENST00000511067 ITGAVP06756 1048 aa8.14□□□□□ -1.11
CHD1-206ENST00000511067 TAF7LQ5H9L4 462 aa8.14□□□□□ -1.11
CHD1-206ENST00000511067 PRSS36Q5K4E3 855 aa8.14□□□□□ -1.11
CHD1-206ENST00000511067 KIAA0907Q7Z7F0 614 aaPredicted RBP8.14□□□□□ -1.11
CHD1-206ENST00000511067 ARHGEF39Q8N4T4 335 aa8.14□□□□□ -1.11
CHD1-206ENST00000511067 LRRN4CLQ8ND94 238 aa8.14□□□□□ -1.11
CHD1-206ENST00000511067 Q96M66 194 aa8.14□□□□□ -1.11
CHD1-206ENST00000511067 FEZ1Q99689 392 aa8.14□□□□□ -1.11
CHD1-206ENST00000511067 DBNDD2Q9BQY9 259 aa8.14□□□□□ -1.11
CHD1-206ENST00000511067 AARSD1Q9BTE6 412 aaKnown RBP8.14□□□□□ -1.11
CHD1-206ENST00000511067 METTL22Q9BUU2 404 aaPredicted RBP8.14□□□□□ -1.11
CHD1-206ENST00000511067 PRDM14Q9GZV8 571 aa8.14□□□□□ -1.11
CHD1-206ENST00000511067 ARHGEF4Q9NR80 690 aa8.14□□□□□ -1.11
CHD1-206ENST00000511067 DIS3Q9Y2L1 958 aaKnown RBP8.14□□□□□ -1.11
CHD1-206ENST00000511067 CNTNAP4Q9C0A0 1308 aa8.13□□□□□ -1.11
CHD1-206ENST00000511067 NOP56O00567 594 aaKnown RBP8.13□□□□□ -1.11
CHD1-206ENST00000511067 SIGLEC6O43699 453 aa8.13□□□□□ -1.11
CHD1-206ENST00000511067 ZNF445P59923 1031 aa8.13□□□□□ -1.11
CHD1-206ENST00000511067 GRB10Q13322 594 aa8.13□□□□□ -1.11
CHD1-206ENST00000511067 NOL9Q5SY16 702 aaKnown RBP8.13□□□□□ -1.11
CHD1-206ENST00000511067 MFSD4AQ8N468 514 aa8.13□□□□□ -1.11
CHD1-206ENST00000511067 ENOX1Q8TC92 643 aaKnown RBP8.13□□□□□ -1.11
CHD1-206ENST00000511067 HEXIM2Q96MH2 286 aaKnown RBP8.13□□□□□ -1.11
CHD1-206ENST00000511067 PUS7Q96PZ0 661 aaKnown RBP8.13□□□□□ -1.11
CHD1-206ENST00000511067 ASCC2Q9H1I8 757 aaPredicted RBP8.13□□□□□ -1.11
CHD1-206ENST00000511067 SLKQ9H2G2 1235 aaPredicted RBP8.13□□□□□ -1.11
CHD1-206ENST00000511067 MKNK2Q9HBH9 465 aa8.13□□□□□ -1.11
CHD1-206ENST00000511067 CGGBP1Q9UFW8 167 aaPredicted RBP8.13□□□□□ -1.11
CHD1-206ENST00000511067 EMC9Q9Y3B6 208 aa8.13□□□□□ -1.11
CHD1-206ENST00000511067 CAPN6Q9Y6Q1 641 aa8.13□□□□□ -1.11
CHD1-206ENST00000511067 TRAV20A0A0B4J274 112 aa8.12□□□□□ -1.11
CHD1-206ENST00000511067 SCO2A0A1W2PP80 73 aa8.12□□□□□ -1.11
CHD1-206ENST00000511067 GNAT3A8MTJ3 354 aa8.12□□□□□ -1.11
CHD1-206ENST00000511067 CAPNS1P04632 268 aa8.12□□□□□ -1.11
CHD1-206ENST00000511067 FGFR1P11362 822 aa8.12□□□□□ -1.11
CHD1-206ENST00000511067 PPP2R2AP63151 447 aa8.12□□□□□ -1.11
CHD1-206ENST00000511067 NFIAQ12857 509 aa8.12□□□□□ -1.11
CHD1-206ENST00000511067 TCEA2Q15560 299 aa8.12□□□□□ -1.11
CHD1-206ENST00000511067 DUSP27Q5VZP5 1158 aa8.12□□□□□ -1.11
CHD1-206ENST00000511067 ZNF662Q6ZS27 426 aa8.12□□□□□ -1.11
CHD1-206ENST00000511067 ZNF765Q7L2R6 523 aa8.12□□□□□ -1.11
CHD1-206ENST00000511067 TRIM59Q8IWR1 403 aa8.12□□□□□ -1.11
CHD1-206ENST00000511067 PPP1R14AQ96A00 147 aa8.12□□□□□ -1.11
CHD1-206ENST00000511067 MRGPRX3Q96LB0 322 aa8.12□□□□□ -1.11
CHD1-206ENST00000511067 MFSD14AQ96MC6 490 aa8.12□□□□□ -1.11
CHD1-206ENST00000511067 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.12□□□□□ -1.11
CHD1-206ENST00000511067 AKT3Q9Y243 479 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms