RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 BAG3O95817 575 aa16.12■□□□□ 0.17
AP003555.1-202ENST00000511013 CCDC175P0C221 793 aa16.12■□□□□ 0.17
AP003555.1-202ENST00000511013 PBX1P40424 430 aa16.12■□□□□ 0.17
AP003555.1-202ENST00000511013 SEMA3FQ13275 785 aa16.12■□□□□ 0.17
AP003555.1-202ENST00000511013 GRM4Q14833 912 aa16.12■□□□□ 0.17
AP003555.1-202ENST00000511013 RRAGBQ5VZM2 374 aa16.12■□□□□ 0.17
AP003555.1-202ENST00000511013 PDXDC2PQ6P474 469 aa16.12■□□□□ 0.17
AP003555.1-202ENST00000511013 CERS3Q8IU89 383 aa16.12■□□□□ 0.17
AP003555.1-202ENST00000511013 TCP11L1Q9NUJ3 509 aa16.12■□□□□ 0.17
AP003555.1-202ENST00000511013 LIMA1Q9UHB6 759 aaKnown RBP16.12■□□□□ 0.17
AP003555.1-202ENST00000511013 PCDHA4Q9UN74 947 aa16.12■□□□□ 0.17
AP003555.1-202ENST00000511013 PARP3Q9Y6F1 533 aa16.12■□□□□ 0.17
AP003555.1-202ENST00000511013 XDHP47989 1333 aa16.11■□□□□ 0.17
AP003555.1-202ENST00000511013 ITIH6Q6UXX5 1313 aa16.11■□□□□ 0.17
AP003555.1-202ENST00000511013 TEX33O43247 280 aa16.11■□□□□ 0.17
AP003555.1-202ENST00000511013 FAM98CQ17RN3 349 aaKnown RBP16.11■□□□□ 0.17
AP003555.1-202ENST00000511013 ARHGAP29Q52LW3 1261 aa16.11■□□□□ 0.17
AP003555.1-202ENST00000511013 TOGARAM2Q6ZUX3 1019 aa16.11■□□□□ 0.17
AP003555.1-202ENST00000511013 CNGA4Q8IV77 575 aa16.11■□□□□ 0.17
AP003555.1-202ENST00000511013 PNMA1Q8ND90 353 aa16.11■□□□□ 0.17
AP003555.1-202ENST00000511013 CCDC148Q8NFR7 591 aa16.11■□□□□ 0.17
AP003555.1-202ENST00000511013 LZTS2Q9BRK4 669 aa16.11■□□□□ 0.17
AP003555.1-202ENST00000511013 MKNK2Q9HBH9 465 aa16.11■□□□□ 0.17
AP003555.1-202ENST00000511013 FAM53CQ9NYF3 392 aa16.11■□□□□ 0.17
AP003555.1-202ENST00000511013 SRP68Q9UHB9 627 aaKnown RBP16.11■□□□□ 0.17
AP003555.1-202ENST00000511013 RTCBQ9Y3I0 505 aaKnown RBP16.11■□□□□ 0.17
AP003555.1-202ENST00000511013 ROBO3Q96MS0 1386 aa16.11■□□□□ 0.17
AP003555.1-202ENST00000511013 IRS2Q9Y4H2 1338 aa16.11■□□□□ 0.17
AP003555.1-202ENST00000511013 NPHP1O15259 732 aa16.1■□□□□ 0.17
AP003555.1-202ENST00000511013 TADA3O75528 432 aa16.1■□□□□ 0.17
AP003555.1-202ENST00000511013 USP17L8P0C7I0 530 aa16.1■□□□□ 0.17
AP003555.1-202ENST00000511013 TM4SF1P30408 202 aa16.1■□□□□ 0.17
AP003555.1-202ENST00000511013 PPP4CP60510 307 aa16.1■□□□□ 0.17
AP003555.1-202ENST00000511013 MAP3K9P80192 1104 aa16.1■□□□□ 0.17
AP003555.1-202ENST00000511013 RBL2Q08999 1139 aa16.1■□□□□ 0.17
AP003555.1-202ENST00000511013 ZNF658Q5TYW1 1059 aaPredicted RBP16.1■□□□□ 0.17
AP003555.1-202ENST00000511013 C4orf32Q8N8J7 132 aa16.1■□□□□ 0.17
AP003555.1-202ENST00000511013 ZNF287Q9HBT7 754 aa16.1■□□□□ 0.17
AP003555.1-202ENST00000511013 MKRN1Q9UHC7 482 aaKnown RBP16.1■□□□□ 0.17
AP003555.1-202ENST00000511013 CTNND2Q9UQB3 1225 aa16.1■□□□□ 0.17
AP003555.1-202ENST00000511013 CCDC194A0A1B0GVG4 234 aa16.1■□□□□ 0.17
AP003555.1-202ENST00000511013 LRRC10BA6NIK2 292 aa16.1■□□□□ 0.17
AP003555.1-202ENST00000511013 GNPATO15228 680 aa16.1■□□□□ 0.17
AP003555.1-202ENST00000511013 CASP1P29466 404 aa16.1■□□□□ 0.17
AP003555.1-202ENST00000511013 EVX2Q03828 476 aa16.1■□□□□ 0.17
AP003555.1-202ENST00000511013 PAK1Q13153 545 aa16.1■□□□□ 0.17
AP003555.1-202ENST00000511013 TRIM14Q14142 442 aa16.1■□□□□ 0.17
AP003555.1-202ENST00000511013 ZNF444Q8N0Y2 327 aaPredicted RBP16.1■□□□□ 0.17
AP003555.1-202ENST00000511013 DAGLBQ8NCG7 672 aa16.1■□□□□ 0.17
AP003555.1-202ENST00000511013 MYL1P05976 194 aa16.09■□□□□ 0.17
AP003555.1-202ENST00000511013 KCNQ4P56696 695 aa16.09■□□□□ 0.17
AP003555.1-202ENST00000511013 TUBB2AQ13885 445 aa16.09■□□□□ 0.17
AP003555.1-202ENST00000511013 VPS72Q15906 364 aa16.09■□□□□ 0.17
AP003555.1-202ENST00000511013 IL17AQ16552 155 aa16.09■□□□□ 0.17
AP003555.1-202ENST00000511013 TUBB2BQ9BVA1 445 aa16.09■□□□□ 0.17
AP003555.1-202ENST00000511013 CARD6Q9BX69 1037 aa16.09■□□□□ 0.17
AP003555.1-202ENST00000511013 LAD1O00515 517 aa16.08■□□□□ 0.17
AP003555.1-202ENST00000511013 MFAP3LO75121 409 aa16.08■□□□□ 0.17
AP003555.1-202ENST00000511013 RPN1P04843 607 aaKnown RBP16.08■□□□□ 0.17
AP003555.1-202ENST00000511013 TSPY3P0CV98 308 aa16.08■□□□□ 0.17
AP003555.1-202ENST00000511013 TSPY8P0CW00 308 aa16.08■□□□□ 0.17
AP003555.1-202ENST00000511013 FECHP22830 423 aa16.08■□□□□ 0.17
AP003555.1-202ENST00000511013 STAT6P42226 847 aa16.08■□□□□ 0.17
AP003555.1-202ENST00000511013 DTHD1Q6ZMT9 781 aa16.08■□□□□ 0.17
AP003555.1-202ENST00000511013 ZNF804AQ7Z570 1209 aa16.08■□□□□ 0.17
AP003555.1-202ENST00000511013 TXNRD3Q86VQ6 643 aa16.08■□□□□ 0.17
AP003555.1-202ENST00000511013 SMYD4Q8IYR2 804 aaPredicted RBP16.08■□□□□ 0.17
AP003555.1-202ENST00000511013 LRRN4CLQ8ND94 238 aa16.08■□□□□ 0.17
AP003555.1-202ENST00000511013 BLZF1Q9H2G9 400 aa16.08■□□□□ 0.17
AP003555.1-202ENST00000511013 IL17RBQ9NRM6 502 aa16.08■□□□□ 0.17
AP003555.1-202ENST00000511013 ANKIB1Q9P2G1 1089 aa16.08■□□□□ 0.17
AP003555.1-202ENST00000511013 PRDM4Q9UKN5 801 aa16.08■□□□□ 0.17
AP003555.1-202ENST00000511013 ADGRG1Q9Y653 693 aa16.08■□□□□ 0.17
AP003555.1-202ENST00000511013 H7C1D1 291 aa16.08■□□□□ 0.16
AP003555.1-202ENST00000511013 N4BP3O15049 544 aa16.08■□□□□ 0.16
AP003555.1-202ENST00000511013 GRAPQ13588 217 aa16.08■□□□□ 0.16
AP003555.1-202ENST00000511013 KRT31Q15323 416 aa16.08■□□□□ 0.16
AP003555.1-202ENST00000511013 WWC2Q6AWC2 1192 aa16.08■□□□□ 0.16
AP003555.1-202ENST00000511013 C15orf52Q6ZUT6 534 aaKnown RBP16.08■□□□□ 0.16
AP003555.1-202ENST00000511013 TMTC1Q8IUR5 882 aa16.08■□□□□ 0.16
AP003555.1-202ENST00000511013 GRAPLQ8TC17 118 aaPredicted RBP16.08■□□□□ 0.16
AP003555.1-202ENST00000511013 NELFBQ8WX92 580 aa16.08■□□□□ 0.16
AP003555.1-202ENST00000511013 STAMQ92783 540 aa16.08■□□□□ 0.16
AP003555.1-202ENST00000511013 WDR24Q96S15 920 aa16.08■□□□□ 0.16
AP003555.1-202ENST00000511013 MAD2L2Q9UI95 211 aa16.08■□□□□ 0.16
AP003555.1-202ENST00000511013 MRFAP1Q9Y605 127 aa16.08■□□□□ 0.16
AP003555.1-202ENST00000511013 ATP8B1O43520 1251 aa16.07■□□□□ 0.16
AP003555.1-202ENST00000511013 KIF5CO60282 957 aa16.07■□□□□ 0.16
AP003555.1-202ENST00000511013 VEGFAP15692 232 aaPredicted RBP16.07■□□□□ 0.16
AP003555.1-202ENST00000511013 CLCN6P51797 869 aa16.07■□□□□ 0.16
AP003555.1-202ENST00000511013 COPB1P53618 953 aaKnown RBP16.07■□□□□ 0.16
AP003555.1-202ENST00000511013 FAM193AP78312 1265 aa16.07■□□□□ 0.16
AP003555.1-202ENST00000511013 TMCO3Q6UWJ1 677 aa16.07■□□□□ 0.16
AP003555.1-202ENST00000511013 RASGRP2Q7LDG7 609 aa16.07■□□□□ 0.16
AP003555.1-202ENST00000511013 GPR161Q8N6U8 529 aaKnown RBP16.07■□□□□ 0.16
AP003555.1-202ENST00000511013 SH3RF3Q8TEJ3 882 aaPredicted RBP16.07■□□□□ 0.16
AP003555.1-202ENST00000511013 CPLX3Q8WVH0 158 aa16.07■□□□□ 0.16
AP003555.1-202ENST00000511013 KIFC2Q96AC6 838 aa16.07■□□□□ 0.16
AP003555.1-202ENST00000511013 BTAF1O14981 1849 aa16.06■□□□□ 0.16
AP003555.1-202ENST00000511013 SOWAHDA6NJG2 315 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms