RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 TRPM4Q8TD43 1214 aa18.4■□□□□ 0.54
SQSTM1-213ENST00000510187 WASF1Q92558 559 aa18.4■□□□□ 0.54
SQSTM1-213ENST00000510187 CCDC94Q9BW85 323 aaPredicted RBP18.4■□□□□ 0.54
SQSTM1-213ENST00000510187 DCAF8L1A6NGE4 600 aa18.39■□□□□ 0.53
SQSTM1-213ENST00000510187 GOLGA8AA7E2F4 631 aa18.39■□□□□ 0.53
SQSTM1-213ENST00000510187 TRIM29Q14134 588 aa18.39■□□□□ 0.53
SQSTM1-213ENST00000510187 NTRK3Q16288 839 aa18.39■□□□□ 0.53
SQSTM1-213ENST00000510187 TPD52L1Q16890 204 aaPredicted RBP18.39■□□□□ 0.53
SQSTM1-213ENST00000510187 SH3BP5LQ7L8J4 393 aa18.39■□□□□ 0.53
SQSTM1-213ENST00000510187 FAM151AQ8WW52 585 aa18.39■□□□□ 0.53
SQSTM1-213ENST00000510187 PI4KBQ9UBF8 816 aa18.39■□□□□ 0.53
SQSTM1-213ENST00000510187 SERPINB13Q9UIV8 391 aa18.39■□□□□ 0.53
SQSTM1-213ENST00000510187 HPSEQ9Y251 543 aa18.39■□□□□ 0.53
SQSTM1-213ENST00000510187 GLTPD2A6NH11 291 aa18.38■□□□□ 0.53
SQSTM1-213ENST00000510187 IKBKBO14920 756 aa18.38■□□□□ 0.53
SQSTM1-213ENST00000510187 CDK8P49336 464 aa18.38■□□□□ 0.53
SQSTM1-213ENST00000510187 RCAN1P53805 252 aa18.38■□□□□ 0.53
SQSTM1-213ENST00000510187 DPCR1Q3MIW9 517 aa18.38■□□□□ 0.53
SQSTM1-213ENST00000510187 TMEM67Q5HYA8 995 aa18.38■□□□□ 0.53
SQSTM1-213ENST00000510187 FAM83AQ86UY5 434 aa18.38■□□□□ 0.53
SQSTM1-213ENST00000510187 RAB11FIP4Q86YS3 637 aa18.38■□□□□ 0.53
SQSTM1-213ENST00000510187 CCDC150Q8NCX0 1101 aa18.38■□□□□ 0.53
SQSTM1-213ENST00000510187 ANKRD7Q92527 254 aa18.38■□□□□ 0.53
SQSTM1-213ENST00000510187 C16orf45Q96MC5 204 aaPredicted RBP18.38■□□□□ 0.53
SQSTM1-213ENST00000510187 HACL1Q9UJ83 578 aa18.38■□□□□ 0.53
SQSTM1-213ENST00000510187 CNTNAP1P78357 1384 aa18.38■□□□□ 0.53
SQSTM1-213ENST00000510187 ASTN2O75129 1339 aaPredicted RBP18.38■□□□□ 0.53
SQSTM1-213ENST00000510187 ATRNL1Q5VV63 1379 aa18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 CCDC69A6NI79 296 aa18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 CDC27P30260 824 aa18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 TNNI2P48788 182 aa18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 CCZ1BP86790 482 aa18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 CCZ1P86791 482 aaPredicted RBP18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 GABPAQ06546 454 aa18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 TNFAIP1Q13829 316 aa18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 PTPAQ15257 358 aa18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 NFXL1Q6ZNB6 911 aa18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 ELOA2Q8IYF1 753 aaPredicted RBP18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 L3MBTL3Q96JM7 780 aaPredicted RBP18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 CSRNP1Q96S65 589 aa18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 EHD4Q9H223 541 aa18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 ADARB2Q9NS39 739 aaKnown RBP18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 TUBE1Q9UJT0 475 aa18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 COL2A1P02458 1487 aaPredicted RBP18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 SKILP12757 684 aa18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 SYKP43405 635 aa18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 KCNJ6P48051 423 aa18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 FAM47AQ5JRC9 791 aa18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 MICU3Q86XE3 530 aa18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 ZNF444Q8N0Y2 327 aaPredicted RBP18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 CRACR2BQ8N4Y2 399 aaPredicted RBP18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 MAP3K14Q99558 947 aa18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 ZKSCAN3Q9BRR0 538 aa18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 GJB4Q9NTQ9 266 aa18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 SWAP70Q9UH65 585 aa18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 SCAF8Q9UPN6 1271 aaKnown RBP18.37■□□□□ 0.53
SQSTM1-213ENST00000510187 TSPY2A6NKD2 308 aa18.36■□□□□ 0.53
SQSTM1-213ENST00000510187 KIF2AO00139 706 aaPredicted RBP18.36■□□□□ 0.53
SQSTM1-213ENST00000510187 CUTAO60888 179 aa18.36■□□□□ 0.53
SQSTM1-213ENST00000510187 FMNL1O95466 1100 aaPredicted RBP18.36■□□□□ 0.53
SQSTM1-213ENST00000510187 HIRAP54198 1017 aaPredicted RBP18.36■□□□□ 0.53
SQSTM1-213ENST00000510187 SSRP1Q08945 709 aaKnown RBP18.36■□□□□ 0.53
SQSTM1-213ENST00000510187 GNL2Q13823 731 aaKnown RBP18.36■□□□□ 0.53
SQSTM1-213ENST00000510187 SART3Q15020 963 aaKnown RBP18.36■□□□□ 0.53
SQSTM1-213ENST00000510187 RESP18Q5W5W9 173 aa18.36■□□□□ 0.53
SQSTM1-213ENST00000510187 UBAC1Q9BSL1 405 aa18.36■□□□□ 0.53
SQSTM1-213ENST00000510187 TRIM34Q9BYJ4 488 aa18.36■□□□□ 0.53
SQSTM1-213ENST00000510187 TMEM39BQ9GZU3 492 aa18.36■□□□□ 0.53
SQSTM1-213ENST00000510187 FAM217BQ9NTX9 383 aaPredicted RBP18.36■□□□□ 0.53
SQSTM1-213ENST00000510187 SLC12A7Q9Y666 1083 aa18.36■□□□□ 0.53
SQSTM1-213ENST00000510187 IFIT3O14879 490 aaKnown RBP18.35■□□□□ 0.53
SQSTM1-213ENST00000510187 IFNAR1P17181 557 aa18.35■□□□□ 0.53
SQSTM1-213ENST00000510187 RASA1P20936 1047 aa18.35■□□□□ 0.53
SQSTM1-213ENST00000510187 NT5C2P49902 561 aa18.35■□□□□ 0.53
SQSTM1-213ENST00000510187 TFAP4Q01664 338 aa18.35■□□□□ 0.53
SQSTM1-213ENST00000510187 RASA3Q14644 834 aa18.35■□□□□ 0.53
SQSTM1-213ENST00000510187 ANGEL2Q5VTE6 544 aaKnown RBP18.35■□□□□ 0.53
SQSTM1-213ENST00000510187 NYAP1Q6ZVC0 841 aa18.35■□□□□ 0.53
SQSTM1-213ENST00000510187 NBPF11Q86T75 865 aa18.35■□□□□ 0.53
SQSTM1-213ENST00000510187 IQCA1Q86XH1 822 aa18.35■□□□□ 0.53
SQSTM1-213ENST00000510187 FOXP4Q8IVH2 680 aaPredicted RBP18.35■□□□□ 0.53
SQSTM1-213ENST00000510187 A0A087WWV3 80 aa18.35■□□□□ 0.53
SQSTM1-213ENST00000510187 ERICH2A1L162 156 aa18.35■□□□□ 0.53
SQSTM1-213ENST00000510187 CEP135Q66GS9 1140 aa18.35■□□□□ 0.53
SQSTM1-213ENST00000510187 FILIP1Q7Z7B0 1213 aa18.35■□□□□ 0.53
SQSTM1-213ENST00000510187 TSC1Q92574 1164 aa18.35■□□□□ 0.53
SQSTM1-213ENST00000510187 ERCC4Q92889 916 aaPredicted RBP18.35■□□□□ 0.53
SQSTM1-213ENST00000510187 AIFM3Q96NN9 605 aa18.35■□□□□ 0.53
SQSTM1-213ENST00000510187 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.35■□□□□ 0.53
SQSTM1-213ENST00000510187 GGA3Q9NZ52 723 aa18.35■□□□□ 0.53
SQSTM1-213ENST00000510187 TSPY3P0CV98 308 aa18.34■□□□□ 0.53
SQSTM1-213ENST00000510187 TSPY8P0CW00 308 aa18.34■□□□□ 0.53
SQSTM1-213ENST00000510187 SLURP2P0DP57 97 aa18.34■□□□□ 0.53
SQSTM1-213ENST00000510187 NCAPHQ15003 741 aa18.34■□□□□ 0.53
SQSTM1-213ENST00000510187 APOBEC3FQ8IUX4 373 aaKnown RBP18.34■□□□□ 0.53
SQSTM1-213ENST00000510187 TMTC2Q8N394 836 aa18.34■□□□□ 0.53
SQSTM1-213ENST00000510187 CCDC112Q8NEF3 446 aa18.34■□□□□ 0.53
SQSTM1-213ENST00000510187 PHKBQ93100 1093 aa18.34■□□□□ 0.53
SQSTM1-213ENST00000510187 ZSCAN10Q96SZ4 725 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms