RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 NOVP48745 357 aa5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 TFAP4Q01664 338 aa5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 KIAA2012Q0VF49 1180 aa5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 PFKFB3Q16875 520 aaPredicted RBP5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 SLC35G1Q2M3R5 365 aa5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 DPCR1Q3MIW9 517 aa5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 DHX40Q8IX18 779 aaKnown RBP5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 FAM177A1Q8N128 213 aaPredicted RBP5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 CCDC82Q8N4S0 544 aa5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 CERS5Q8N5B7 392 aa5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 SLC44A5Q8NCS7 719 aa5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 PNMA1Q8ND90 353 aa5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 MASTLQ96GX5 879 aa5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 CLIC6Q96NY7 704 aa5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 SDF4Q9BRK5 362 aa5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 KAT14Q9H8E8 782 aa5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 ZNF287Q9HBT7 754 aa5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 SH3GLB2Q9NR46 395 aa5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 TUBE1Q9UJT0 475 aa5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 CEP131Q9UPN4 1083 aa5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 PCDHB6Q9Y5E3 794 aa5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 V9GY48 417 aaPredicted RBP5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 MYO3BQ8WXR4 1341 aa5.47□□□□□ -1.53
PDLIM5-214ENST00000510099 EP400Q96L91 3159 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 A0A087WWV3 80 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 hCG_1642624A0A1W2PR95 340 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 USP17L3A6NCW0 530 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 USP17L4A6NCW7 530 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 GOLGA6L6A8MZA4 724 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 GOLGA6L19H0YKK7 550 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 ACTN4O43707 911 aaKnown RBP5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 OFD1O75665 1012 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 TSPY3P0CV98 308 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 TSPY8P0CW00 308 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 ALDH1B1P30837 517 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 CDK8P49336 464 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 GNAQP50148 359 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 PLCD1P51178 756 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 NLRP12P59046 1061 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 GTF2IP78347 998 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 GRIN1Q05586 938 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 GABPAQ06546 454 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 SLC4A8Q2Y0W8 1093 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 EARS2Q5JPH6 523 aaKnown RBP5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 STYK1Q6J9G0 422 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 OLFM4Q6UX06 510 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 DPP8Q6V1X1 898 aaPredicted RBP5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 KRBA2Q6ZNG9 492 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 USP17L1Q7RTZ2 530 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 METTL16Q86W50 562 aaKnown RBP5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 MPNDQ8N594 471 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 AOPEPQ8N6M6 819 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 DAGLBQ8NCG7 672 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 NEDD1Q8NHV4 660 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 PIBF1Q8WXW3 757 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 ERCC4Q92889 916 aaPredicted RBP5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 MRFAP1L1Q96HT8 127 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 EYA3Q99504 573 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 TMEM47Q9BQJ4 181 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 LZTS2Q9BRK4 669 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 SPZ1Q9BXG8 430 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 NAT10Q9H0A0 1025 aaKnown RBP5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 KCNF1Q9H3M0 494 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 MKNK2Q9HBH9 465 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 ANO8Q9HCE9 1232 aaPredicted RBP5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 SPTLC3Q9NUV7 552 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 FAM13BQ9NYF5 915 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 SAP30BPQ9UHR5 308 aaKnown RBP5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 MAD2L2Q9UI95 211 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 KCNH3Q9ULD8 1083 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 SRPRBQ9Y5M8 271 aaKnown RBP5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 PARP3Q9Y6F1 533 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 MYH2Q9UKX2 1941 aa5.46□□□□□ -1.54
PDLIM5-214ENST00000510099 IGKV6D-41A0A0C4DH26 115 aa5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 PALM3A6NDB9 673 aaPredicted RBP5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 BECN2A8MW95 431 aa5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 STXBP3O00186 592 aa5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 WNT7AO00755 349 aa5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 IKBKBO14920 756 aa5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 TOP1P11387 765 aaKnown RBP5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 CALML3P27482 149 aa5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 RXRBP28702 533 aa5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 FKBP1AP62942 108 aaKnown RBP5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 ATP2C1P98194 919 aaPredicted RBP5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 PLCB2Q00722 1185 aa5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 PNOCQ13519 176 aa5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 NCAPHQ15003 741 aa5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 ZRSR1Q15695 479 aaKnown RBP5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 NOM1Q5C9Z4 860 aaKnown RBP5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 TTC38Q5R3I4 469 aa5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 NT5DC1Q5TFE4 455 aa5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 MSL1Q68DK7 614 aa5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 WWC2Q6AWC2 1192 aa5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 GALNT17Q6IS24 598 aa5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 TYW1BQ6NUM6 668 aa5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 HHIPL2Q6UWX4 724 aa5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 ZNF444Q8N0Y2 327 aaPredicted RBP5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 STAG2Q8N3U4 1231 aa5.45□□□□□ -1.54
PDLIM5-214ENST00000510099 CCDC148Q8NFR7 591 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms