RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 GPATCH4Q5T3I0 446 aaKnown RBP8.98□□□□□ -0.97
SSBP2-213ENST00000509743 ARL6IP4Q66PJ3 421 aaKnown RBP8.98□□□□□ -0.97
SSBP2-213ENST00000509743 PPP1R18Q6NYC8 613 aa8.98□□□□□ -0.97
SSBP2-213ENST00000509743 KRBA2Q6ZNG9 492 aa8.98□□□□□ -0.97
SSBP2-213ENST00000509743 PIK3AP1Q6ZUJ8 805 aa8.98□□□□□ -0.97
SSBP2-213ENST00000509743 KRT25Q7Z3Z0 450 aa8.98□□□□□ -0.97
SSBP2-213ENST00000509743 HEATR3Q7Z4Q2 680 aa8.98□□□□□ -0.97
SSBP2-213ENST00000509743 LUZP1Q86V48 1076 aa8.98□□□□□ -0.97
SSBP2-213ENST00000509743 ZSCAN30Q86W11 494 aa8.98□□□□□ -0.97
SSBP2-213ENST00000509743 METTL16Q86W50 562 aaKnown RBP8.98□□□□□ -0.97
SSBP2-213ENST00000509743 LARGE2Q8N3Y3 721 aa8.98□□□□□ -0.97
SSBP2-213ENST00000509743 CLIC6Q96NY7 704 aa8.98□□□□□ -0.97
SSBP2-213ENST00000509743 BPIFA3Q9BQP9 254 aa8.98□□□□□ -0.97
SSBP2-213ENST00000509743 RIOX1Q9H6W3 641 aa8.98□□□□□ -0.97
SSBP2-213ENST00000509743 KANSL2Q9H9L4 492 aa8.98□□□□□ -0.97
SSBP2-213ENST00000509743 C6orf50Q9HD87 102 aa8.98□□□□□ -0.97
SSBP2-213ENST00000509743 NYAP2Q9P242 653 aa8.98□□□□□ -0.97
SSBP2-213ENST00000509743 TUBE1Q9UJT0 475 aa8.98□□□□□ -0.97
SSBP2-213ENST00000509743 SYNPO2Q9UMS6 1093 aa8.98□□□□□ -0.97
SSBP2-213ENST00000509743 FAM205CA6NFA0 338 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 USP17L5A8MUK1 530 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 BECN2A8MW95 431 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 GOLGA6L6A8MZA4 724 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 M0R2N6 131 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 LAD1O00515 517 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 MPHOSPH10O00566 681 aaKnown RBP8.97□□□□□ -0.97
SSBP2-213ENST00000509743 CYTH3O43739 400 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 TPM3P06753 285 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 VIL1P09327 827 aaKnown RBP8.97□□□□□ -0.97
SSBP2-213ENST00000509743 GOLGA8HP0CJ92 632 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 ATP2B1P20020 1258 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 NAPAP54920 295 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 NLRP12P59046 1061 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 TPM4P67936 248 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 ZNF543Q08ER8 600 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 EARS2Q5JPH6 523 aaKnown RBP8.97□□□□□ -0.97
SSBP2-213ENST00000509743 TATDN1Q6P1N9 297 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 USP17L2Q6R6M4 530 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 SARM1Q6SZW1 724 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.97□□□□□ -0.97
SSBP2-213ENST00000509743 ZSCAN29Q8IWY8 852 aaPredicted RBP8.97□□□□□ -0.97
SSBP2-213ENST00000509743 NIM1KQ8IY84 436 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 OGFOD1Q8N543 542 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 CNNM3Q8NE01 707 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 PIBF1Q8WXW3 757 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 GPKOWQ92917 476 aaPredicted RBP eCLIP8.97□□□□□ -0.97
SSBP2-213ENST00000509743 PDGFDQ9GZP0 370 aaPredicted RBP8.97□□□□□ -0.97
SSBP2-213ENST00000509743 MTFR1LQ9H019 292 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 ZMYND12Q9H0C1 365 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 PIM2Q9P1W9 311 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 CLIP2Q9UDT6 1046 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 HERC5Q9UII4 1024 aaKnown RBP8.97□□□□□ -0.97
SSBP2-213ENST00000509743 MTMR7Q9Y216 660 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 CHD4Q14839 1912 aa8.97□□□□□ -0.97
SSBP2-213ENST00000509743 DDTLA6NHG4 134 aaPredicted RBP8.96□□□□□ -0.98
SSBP2-213ENST00000509743 SPDYE2BA6NHP3 402 aa8.96□□□□□ -0.98
SSBP2-213ENST00000509743 SPDYE6P0CI01 402 aa8.96□□□□□ -0.98
SSBP2-213ENST00000509743 MSNP26038 577 aaKnown RBP8.96□□□□□ -0.98
SSBP2-213ENST00000509743 TCP10Q12799 353 aa8.96□□□□□ -0.98
SSBP2-213ENST00000509743 IQCB1Q15051 598 aa8.96□□□□□ -0.98
SSBP2-213ENST00000509743 DLGAP5Q15398 846 aa8.96□□□□□ -0.98
SSBP2-213ENST00000509743 CERKLQ49MI3 558 aaPredicted RBP8.96□□□□□ -0.98
SSBP2-213ENST00000509743 DALRD3Q5D0E6 543 aaKnown RBP8.96□□□□□ -0.98
SSBP2-213ENST00000509743 FKBP1CQ5VVH2 108 aa8.96□□□□□ -0.98
SSBP2-213ENST00000509743 C11orf57Q6ZUT1 292 aaPredicted RBP8.96□□□□□ -0.98
SSBP2-213ENST00000509743 TMEM179Q6ZVK1 233 aa8.96□□□□□ -0.98
SSBP2-213ENST00000509743 LRRC47Q8N1G4 583 aaKnown RBP8.96□□□□□ -0.98
SSBP2-213ENST00000509743 MTMR14Q8NCE2 650 aa8.96□□□□□ -0.98
SSBP2-213ENST00000509743 AGBL3Q8NEM8 1001 aa8.96□□□□□ -0.98
SSBP2-213ENST00000509743 DCAF4Q8WV16 495 aa8.96□□□□□ -0.98
SSBP2-213ENST00000509743 MKL1Q969V6 931 aa8.96□□□□□ -0.98
SSBP2-213ENST00000509743 PIGSQ96S52 555 aa8.96□□□□□ -0.98
SSBP2-213ENST00000509743 GMLQ99445 158 aa8.96□□□□□ -0.98
SSBP2-213ENST00000509743 CSRNP2Q9H175 543 aa8.96□□□□□ -0.98
SSBP2-213ENST00000509743 DNAJC18Q9H819 358 aa8.96□□□□□ -0.98
SSBP2-213ENST00000509743 ZNRF3Q9ULT6 936 aa8.96□□□□□ -0.98
SSBP2-213ENST00000509743 EP400Q96L91 3159 aa8.96□□□□□ -0.98
SSBP2-213ENST00000509743 PNMA6FA0A0J9YX94 578 aa8.95□□□□□ -0.98
SSBP2-213ENST00000509743 PSMD14O00487 310 aa8.95□□□□□ -0.98
SSBP2-213ENST00000509743 IKBKBO14920 756 aa8.95□□□□□ -0.98
SSBP2-213ENST00000509743 MYO1BO43795 1136 aa8.95□□□□□ -0.98
SSBP2-213ENST00000509743 SMC2O95347 1197 aa8.95□□□□□ -0.98
SSBP2-213ENST00000509743 VEGFAP15692 232 aaPredicted RBP8.95□□□□□ -0.98
SSBP2-213ENST00000509743 CDC25BP30305 580 aa8.95□□□□□ -0.98
SSBP2-213ENST00000509743 CLCN1P35523 988 aa8.95□□□□□ -0.98
SSBP2-213ENST00000509743 LONP1P36776 959 aaKnown RBP8.95□□□□□ -0.98
SSBP2-213ENST00000509743 TXLNAP40222 546 aa8.95□□□□□ -0.98
SSBP2-213ENST00000509743 PRPHP41219 470 aa8.95□□□□□ -0.98
SSBP2-213ENST00000509743 CACNB3P54284 484 aa8.95□□□□□ -0.98
SSBP2-213ENST00000509743 PLCB2Q00722 1185 aa8.95□□□□□ -0.98
SSBP2-213ENST00000509743 ICA1Q05084 483 aa8.95□□□□□ -0.98
SSBP2-213ENST00000509743 PTGDRQ13258 359 aa8.95□□□□□ -0.98
SSBP2-213ENST00000509743 POSTNQ15063 836 aa8.95□□□□□ -0.98
SSBP2-213ENST00000509743 NONOQ15233 471 aaKnown RBP eCLIP8.95□□□□□ -0.98
SSBP2-213ENST00000509743 ZNF174Q15697 407 aa8.95□□□□□ -0.98
SSBP2-213ENST00000509743 CCDC96Q2M329 555 aa8.95□□□□□ -0.98
SSBP2-213ENST00000509743 TYW1BQ6NUM6 668 aa8.95□□□□□ -0.98
SSBP2-213ENST00000509743 SH3BP5LQ7L8J4 393 aa8.95□□□□□ -0.98
SSBP2-213ENST00000509743 HOMER1Q86YM7 354 aa8.95□□□□□ -0.98
SSBP2-213ENST00000509743 ZFPM1Q8IX07 1006 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms