RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 A0A1W2PQY0 241 aa12.03□□□□□ -0.48
PTPN20-221ENST00000509599 RFXAPO00287 272 aa12.03□□□□□ -0.48
PTPN20-221ENST00000509599 LDHBP07195 334 aaKnown RBP12.03□□□□□ -0.48
PTPN20-221ENST00000509599 CSF2RAP15509 400 aa12.03□□□□□ -0.48
PTPN20-221ENST00000509599 METTL24Q5JXM2 366 aa12.03□□□□□ -0.48
PTPN20-221ENST00000509599 WDR78Q5VTH9 848 aa12.03□□□□□ -0.48
PTPN20-221ENST00000509599 KRT40Q6A162 431 aa12.03□□□□□ -0.48
PTPN20-221ENST00000509599 GTF3C2Q8WUA4 911 aaPredicted RBP12.03□□□□□ -0.48
PTPN20-221ENST00000509599 ANKS1AQ92625 1134 aa12.03□□□□□ -0.48
PTPN20-221ENST00000509599 TOX2Q96NM4 488 aa12.03□□□□□ -0.48
PTPN20-221ENST00000509599 AS3MTQ9HBK9 375 aa12.03□□□□□ -0.48
PTPN20-221ENST00000509599 PTPRZ1P23471 2315 aaPredicted RBP12.03□□□□□ -0.48
PTPN20-221ENST00000509599 SPDYE16A6NNV3 312 aaPredicted RBP12.02□□□□□ -0.49
PTPN20-221ENST00000509599 MYOGP15173 224 aa12.02□□□□□ -0.49
PTPN20-221ENST00000509599 FGFR2P21802 821 aa12.02□□□□□ -0.49
PTPN20-221ENST00000509599 RABGGTBP53611 331 aa12.02□□□□□ -0.49
PTPN20-221ENST00000509599 JAG1P78504 1218 aa12.02□□□□□ -0.49
PTPN20-221ENST00000509599 FKBP5Q13451 457 aaPredicted RBP12.02□□□□□ -0.49
PTPN20-221ENST00000509599 PRAMEF19Q5SWL8 479 aa12.02□□□□□ -0.49
PTPN20-221ENST00000509599 PPP2R2DQ66LE6 453 aa12.02□□□□□ -0.49
PTPN20-221ENST00000509599 OLFML2BQ68BL8 750 aa12.02□□□□□ -0.49
PTPN20-221ENST00000509599 CCDC174Q6PII3 467 aa12.02□□□□□ -0.49
PTPN20-221ENST00000509599 NYAP1Q6ZVC0 841 aa12.02□□□□□ -0.49
PTPN20-221ENST00000509599 HLA-CQ95604 372 aa12.02□□□□□ -0.49
PTPN20-221ENST00000509599 RABGAP1Q9Y3P9 1069 aa12.02□□□□□ -0.49
PTPN20-221ENST00000509599 CACNA1GO43497 2377 aa12.02□□□□□ -0.49
PTPN20-221ENST00000509599 COL4A4P53420 1690 aaPredicted RBP12.02□□□□□ -0.49
PTPN20-221ENST00000509599 ZNF521Q96K83 1311 aa12.02□□□□□ -0.49
PTPN20-221ENST00000509599 ZFHX2Q9C0A1 2572 aaPredicted RBP12.01□□□□□ -0.49
PTPN20-221ENST00000509599 DCDC2CA8MYV0 355 aa12.01□□□□□ -0.49
PTPN20-221ENST00000509599 GRM8O00222 908 aa12.01□□□□□ -0.49
PTPN20-221ENST00000509599 CCNA1P78396 465 aa12.01□□□□□ -0.49
PTPN20-221ENST00000509599 CSPP1Q1MSJ5 1256 aa12.01□□□□□ -0.49
PTPN20-221ENST00000509599 BEND3Q5T5X7 828 aa12.01□□□□□ -0.49
PTPN20-221ENST00000509599 PSRC1Q6PGN9 363 aaPredicted RBP12.01□□□□□ -0.49
PTPN20-221ENST00000509599 KAZALD1Q96I82 304 aa12.01□□□□□ -0.49
PTPN20-221ENST00000509599 PCGF6Q9BYE7 350 aa12.01□□□□□ -0.49
PTPN20-221ENST00000509599 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.01□□□□□ -0.49
PTPN20-221ENST00000509599 IVNS1ABPQ9Y6Y0 642 aa12.01□□□□□ -0.49
PTPN20-221ENST00000509599 C19orf81C9J6K1 198 aa12□□□□□ -0.49
PTPN20-221ENST00000509599 IFIT1P09914 478 aaKnown RBP12□□□□□ -0.49
PTPN20-221ENST00000509599 SLC5A1P13866 664 aa12□□□□□ -0.49
PTPN20-221ENST00000509599 SHROOM1Q2M3G4 852 aaPredicted RBP12□□□□□ -0.49
PTPN20-221ENST00000509599 PACS2Q86VP3 889 aa12□□□□□ -0.49
PTPN20-221ENST00000509599 GJD3Q8N144 294 aa12□□□□□ -0.49
PTPN20-221ENST00000509599 IRX2Q9BZI1 471 aaPredicted RBP12□□□□□ -0.49
PTPN20-221ENST00000509599 SALL1Q9NSC2 1324 aa12□□□□□ -0.49
PTPN20-221ENST00000509599 DCHS1Q96JQ0 3298 aa11.99□□□□□ -0.49
PTPN20-221ENST00000509599 EPOPA6NHQ4 379 aa11.99□□□□□ -0.49
PTPN20-221ENST00000509599 F6X3S4 739 aa11.99□□□□□ -0.49
PTPN20-221ENST00000509599 PGK1P00558 417 aa11.99□□□□□ -0.49
PTPN20-221ENST00000509599 ALADP13716 330 aa11.99□□□□□ -0.49
PTPN20-221ENST00000509599 PUM3Q15397 648 aaKnown RBP11.99□□□□□ -0.49
PTPN20-221ENST00000509599 E2F4Q16254 413 aa11.99□□□□□ -0.49
PTPN20-221ENST00000509599 FAM178BQ8IXR5 827 aa11.99□□□□□ -0.49
PTPN20-221ENST00000509599 XPNPEP3Q9NQH7 507 aa11.99□□□□□ -0.49
PTPN20-221ENST00000509599 BTBD7Q9P203 1132 aa11.99□□□□□ -0.49
PTPN20-221ENST00000509599 CACNA1HO95180 2353 aa11.98□□□□□ -0.49
PTPN20-221ENST00000509599 USP17L10C9JJH3 530 aa11.98□□□□□ -0.49
PTPN20-221ENST00000509599 ADORA2AP29274 412 aa11.98□□□□□ -0.49
PTPN20-221ENST00000509599 BTDP43251 543 aa11.98□□□□□ -0.49
PTPN20-221ENST00000509599 RHBDL3P58872 404 aa11.98□□□□□ -0.49
PTPN20-221ENST00000509599 DPP9Q86TI2 863 aa11.98□□□□□ -0.49
PTPN20-221ENST00000509599 TMEM199Q8N511 208 aa11.98□□□□□ -0.49
PTPN20-221ENST00000509599 SUCLG2Q96I99 432 aa11.98□□□□□ -0.49
PTPN20-221ENST00000509599 IL23AQ9NPF7 189 aa11.98□□□□□ -0.49
PTPN20-221ENST00000509599 WDR70Q9NW82 654 aa11.98□□□□□ -0.49
PTPN20-221ENST00000509599 TSR3Q9UJK0 312 aaKnown RBP11.98□□□□□ -0.49
PTPN20-221ENST00000509599 TECTAO75443 2155 aa11.98□□□□□ -0.49
PTPN20-221ENST00000509599 COBLO75128 1261 aa11.97□□□□□ -0.49
PTPN20-221ENST00000509599 ASNSP08243 561 aa11.97□□□□□ -0.49
PTPN20-221ENST00000509599 CALD1Q05682 793 aaKnown RBP11.97□□□□□ -0.49
PTPN20-221ENST00000509599 RNF180Q86T96 592 aa11.97□□□□□ -0.49
PTPN20-221ENST00000509599 TSR2Q969E8 191 aaKnown RBP11.97□□□□□ -0.49
PTPN20-221ENST00000509599 PPP1R12CQ9BZL4 782 aa11.97□□□□□ -0.49
PTPN20-221ENST00000509599 STARD7Q9NQZ5 370 aa11.97□□□□□ -0.49
PTPN20-221ENST00000509599 PCDHA11Q9Y5I1 949 aa11.97□□□□□ -0.49
PTPN20-221ENST00000509599 FOCADQ5VW36 1801 aa11.97□□□□□ -0.49
PTPN20-221ENST00000509599 RIF1Q5UIP0 2472 aaKnown RBP11.96□□□□□ -0.49
PTPN20-221ENST00000509599 PLXNA3P51805 1871 aa11.96□□□□□ -0.49
PTPN20-221ENST00000509599 GRXCR2A6NFK2 248 aa11.96□□□□□ -0.49
PTPN20-221ENST00000509599 APBB1O00213 710 aa11.96□□□□□ -0.49
PTPN20-221ENST00000509599 RARBP10826 455 aa11.96□□□□□ -0.49
PTPN20-221ENST00000509599 TWISTNBQ3B726 338 aaPredicted RBP11.96□□□□□ -0.49
PTPN20-221ENST00000509599 HFE2Q6ZVN8 426 aa11.96□□□□□ -0.49
PTPN20-221ENST00000509599 OTOP2Q7RTS6 562 aa11.96□□□□□ -0.49
PTPN20-221ENST00000509599 PRSS33Q8NF86 280 aa11.96□□□□□ -0.49
PTPN20-221ENST00000509599 KLHDC4Q8TBB5 520 aa11.96□□□□□ -0.49
PTPN20-221ENST00000509599 MTIF3Q9H2K0 278 aaKnown RBP11.96□□□□□ -0.49
PTPN20-221ENST00000509599 CERS4Q9HA82 394 aa11.96□□□□□ -0.49
PTPN20-221ENST00000509599 HERC5Q9UII4 1024 aaKnown RBP11.96□□□□□ -0.49
PTPN20-221ENST00000509599 ADAMTS8Q9UP79 889 aa11.96□□□□□ -0.49
PTPN20-221ENST00000509599 FAM186AA6NE01 2351 aa11.96□□□□□ -0.5
PTPN20-221ENST00000509599 KMT2EQ8IZD2 1858 aa11.95□□□□□ -0.5
PTPN20-221ENST00000509599 MROH7-TTC4A0A0A0MT08 1334 aa11.95□□□□□ -0.5
PTPN20-221ENST00000509599 SCN5AQ14524 2016 aa11.95□□□□□ -0.5
PTPN20-221ENST00000509599 DCXO43602 365 aa11.95□□□□□ -0.5
PTPN20-221ENST00000509599 ADAMTS4O75173 837 aa11.95□□□□□ -0.5
PTPN20-221ENST00000509599 FGBP02675 491 aa11.95□□□□□ -0.5
PTPN20-221ENST00000509599 SSTR3P32745 418 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms