RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 ZMYM5Q9UJ78 669 aa4.78□□□□□ -1.64
XRCC4-204ENST00000509268 PCDHA5Q9Y5H7 936 aa4.78□□□□□ -1.64
XRCC4-204ENST00000509268 BUB1BO60566 1050 aaPredicted RBP4.77□□□□□ -1.65
XRCC4-204ENST00000509268 USP2O75604 605 aaPredicted RBP4.77□□□□□ -1.65
XRCC4-204ENST00000509268 LAPTM5Q13571 262 aa4.77□□□□□ -1.65
XRCC4-204ENST00000509268 CEP128Q6ZU80 1094 aa4.77□□□□□ -1.65
XRCC4-204ENST00000509268 MENTQ9BUN1 341 aa4.77□□□□□ -1.65
XRCC4-204ENST00000509268 ASPNQ9BXN1 380 aa4.77□□□□□ -1.65
XRCC4-204ENST00000509268 SMPD4Q9NXE4 827 aa4.77□□□□□ -1.65
XRCC4-204ENST00000509268 LRRN2O75325 713 aa4.76□□□□□ -1.65
XRCC4-204ENST00000509268 ITGB3P05106 788 aa4.76□□□□□ -1.65
XRCC4-204ENST00000509268 RPL10P27635 214 aaKnown RBP4.76□□□□□ -1.65
XRCC4-204ENST00000509268 ARL4AP40617 200 aa4.76□□□□□ -1.65
XRCC4-204ENST00000509268 DSC3Q14574 896 aa4.76□□□□□ -1.65
XRCC4-204ENST00000509268 CPZQ66K79 652 aa4.76□□□□□ -1.65
XRCC4-204ENST00000509268 TTBK2Q6IQ55 1244 aa4.76□□□□□ -1.65
XRCC4-204ENST00000509268 TMC7Q7Z402 723 aa4.76□□□□□ -1.65
XRCC4-204ENST00000509268 ACSF2Q96CM8 615 aaPredicted RBP4.76□□□□□ -1.65
XRCC4-204ENST00000509268 C1QTNF3Q9BXJ4 246 aa4.76□□□□□ -1.65
XRCC4-204ENST00000509268 OSBPL7Q9BZF2 842 aa4.76□□□□□ -1.65
XRCC4-204ENST00000509268 LMNB1P20700 586 aa4.75□□□□□ -1.65
XRCC4-204ENST00000509268 CBX2Q14781 532 aaPredicted RBP4.75□□□□□ -1.65
XRCC4-204ENST00000509268 GALNT18Q6P9A2 607 aa4.75□□□□□ -1.65
XRCC4-204ENST00000509268 TMC6Q7Z403 805 aa4.75□□□□□ -1.65
XRCC4-204ENST00000509268 WAPLQ7Z5K2 1190 aa4.75□□□□□ -1.65
XRCC4-204ENST00000509268 SLITRK6Q9H5Y7 841 aa4.75□□□□□ -1.65
XRCC4-204ENST00000509268 IRS2Q9Y4H2 1338 aa4.74□□□□□ -1.65
XRCC4-204ENST00000509268 PFKLP17858 780 aa4.74□□□□□ -1.65
XRCC4-204ENST00000509268 GDF5P43026 501 aa4.74□□□□□ -1.65
XRCC4-204ENST00000509268 YARSP54577 528 aaKnown RBP4.74□□□□□ -1.65
XRCC4-204ENST00000509268 FERMT3Q86UX7 667 aa4.74□□□□□ -1.65
XRCC4-204ENST00000509268 TTC9BQ8N6N2 239 aa4.74□□□□□ -1.65
XRCC4-204ENST00000509268 USHBP1Q8N6Y0 703 aa4.74□□□□□ -1.65
XRCC4-204ENST00000509268 SYTL5Q8TDW5 730 aaPredicted RBP4.74□□□□□ -1.65
XRCC4-204ENST00000509268 ASCC2Q9H1I8 757 aaPredicted RBP4.74□□□□□ -1.65
XRCC4-204ENST00000509268 SHISA3A0PJX4 238 aa4.74□□□□□ -1.65
XRCC4-204ENST00000509268 CARNS1A5YM72 827 aa4.74□□□□□ -1.65
XRCC4-204ENST00000509268 WTIPA6NIX2 430 aaPredicted RBP4.74□□□□□ -1.65
XRCC4-204ENST00000509268 SDHBP21912 280 aa4.74□□□□□ -1.65
XRCC4-204ENST00000509268 IGFBP6P24592 240 aaPredicted RBP4.74□□□□□ -1.65
XRCC4-204ENST00000509268 RTP1P59025 263 aa4.74□□□□□ -1.65
XRCC4-204ENST00000509268 NT5DC1Q5TFE4 455 aa4.74□□□□□ -1.65
XRCC4-204ENST00000509268 HHIPL1Q96JK4 782 aa4.74□□□□□ -1.65
XRCC4-204ENST00000509268 MRIQ9BWK5 157 aa4.74□□□□□ -1.65
XRCC4-204ENST00000509268 TNFRSF10DQ9UBN6 386 aa4.74□□□□□ -1.65
XRCC4-204ENST00000509268 FAM8A1Q9UBU6 413 aa4.74□□□□□ -1.65
XRCC4-204ENST00000509268 CYR61O00622 381 aa4.73□□□□□ -1.65
XRCC4-204ENST00000509268 RAB3GAP1Q15042 981 aa4.73□□□□□ -1.65
XRCC4-204ENST00000509268 LIPIQ6XZB0 460 aa4.73□□□□□ -1.65
XRCC4-204ENST00000509268 DAGLBQ8NCG7 672 aa4.73□□□□□ -1.65
XRCC4-204ENST00000509268 KREMEN1Q96MU8 473 aa4.73□□□□□ -1.65
XRCC4-204ENST00000509268 USTQ9Y2C2 406 aa4.73□□□□□ -1.65
XRCC4-204ENST00000509268 SSU72P8A0A1W2PR75 194 aa4.72□□□□□ -1.65
XRCC4-204ENST00000509268 TREHO43280 583 aa4.72□□□□□ -1.65
XRCC4-204ENST00000509268 PCBP3P57721 371 aaKnown RBP4.72□□□□□ -1.65
XRCC4-204ENST00000509268 TARBP2Q15633 366 aaKnown RBP4.72□□□□□ -1.65
XRCC4-204ENST00000509268 TSNAXIP1Q2TAA8 658 aa4.72□□□□□ -1.65
XRCC4-204ENST00000509268 FAM13CQ8NE31 585 aa4.72□□□□□ -1.65
XRCC4-204ENST00000509268 SAMD11Q96NU1 681 aa4.72□□□□□ -1.65
XRCC4-204ENST00000509268 RBM15Q96T37 977 aaKnown RBP eCLIP4.72□□□□□ -1.65
XRCC4-204ENST00000509268 PLCD4Q9BRC7 762 aa4.72□□□□□ -1.65
XRCC4-204ENST00000509268 RPL6Q02878 288 aaKnown RBP4.71□□□□□ -1.66
XRCC4-204ENST00000509268 SEPT6Q14141 434 aa4.71□□□□□ -1.66
XRCC4-204ENST00000509268 VWA3BQ502W6 1294 aa4.71□□□□□ -1.66
XRCC4-204ENST00000509268 TMEM201Q5SNT2 666 aa4.71□□□□□ -1.66
XRCC4-204ENST00000509268 DIEXFQ68CQ4 756 aaKnown RBP4.71□□□□□ -1.66
XRCC4-204ENST00000509268 ALG1LQ6GMV1 187 aa4.71□□□□□ -1.66
XRCC4-204ENST00000509268 TXNDC2Q86VQ3 553 aa4.71□□□□□ -1.66
XRCC4-204ENST00000509268 SLFN12Q8IYM2 578 aa4.71□□□□□ -1.66
XRCC4-204ENST00000509268 LINC00116Q8NCU8 138 aa4.71□□□□□ -1.66
XRCC4-204ENST00000509268 SPG7Q9UQ90 795 aa4.71□□□□□ -1.66
XRCC4-204ENST00000509268 PCDHB5Q9Y5E4 795 aa4.71□□□□□ -1.66
XRCC4-204ENST00000509268 TMEM82A0PJX8 343 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 SH3D21A4FU49 640 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 C6P13671 934 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 ZNF20P17024 532 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 TNNI2P48788 182 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 NCKAP1LP55160 1127 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 NMIQ13287 307 aaPredicted RBP4.7□□□□□ -1.66
XRCC4-204ENST00000509268 NR1I3Q14994 352 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 AGMOQ6ZNB7 445 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 ZNF655Q8N720 491 aaPredicted RBP4.7□□□□□ -1.66
XRCC4-204ENST00000509268 FOXP3Q9BZS1 431 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 MIR1-1HGQ9H1L0 117 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 C12orf49Q9H741 205 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 SUSD2Q9UGT4 822 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 DCTN4Q9UJW0 460 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 TCFL5Q9UL49 500 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 TAF6LQ9Y6J9 622 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 FADS2P1A8MWK0 482 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 UPK3BL1B0FP48 263 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 UPK3BL2E5RIL1 263 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 USP17L7P0C7H9 530 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 MSL3P1P0C860 447 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 ENDOUP21128 410 aaKnown RBP4.7□□□□□ -1.66
XRCC4-204ENST00000509268 TACR2P21452 398 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 MAPKAPK2P49137 400 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 CYP4F8P98187 520 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 HSF5Q4G112 596 aaPredicted RBP4.7□□□□□ -1.66
XRCC4-204ENST00000509268 SAPCD2Q86UD0 394 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms