RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 TRIT1Q9H3H1 467 aaKnown RBP6.8□□□□□ -1.32
NFKB1-208ENST00000509165 C19orf73Q9NVV2 129 aa6.8□□□□□ -1.32
NFKB1-208ENST00000509165 EFR3BQ9Y2G0 817 aa6.8□□□□□ -1.32
NFKB1-208ENST00000509165 BAZ1BQ9UIG0 1483 aaKnown RBP6.79□□□□□ -1.32
NFKB1-208ENST00000509165 RNF4P78317 190 aa6.79□□□□□ -1.32
NFKB1-208ENST00000509165 NBPF9Q3BBW0 867 aa6.79□□□□□ -1.32
NFKB1-208ENST00000509165 ATG4DQ86TL0 474 aaPredicted RBP6.79□□□□□ -1.32
NFKB1-208ENST00000509165 FLAD1Q8NFF5 587 aa6.79□□□□□ -1.32
NFKB1-208ENST00000509165 GPATCH2Q9NW75 528 aa6.79□□□□□ -1.32
NFKB1-208ENST00000509165 KRTAP9-7A8MTY7 169 aa6.78□□□□□ -1.32
NFKB1-208ENST00000509165 CLEC3AO75596 197 aa6.78□□□□□ -1.32
NFKB1-208ENST00000509165 TCF3P15923 654 aa6.78□□□□□ -1.32
NFKB1-208ENST00000509165 JUNBP17275 347 aaPredicted RBP6.78□□□□□ -1.32
NFKB1-208ENST00000509165 SNW1Q13573 536 aaKnown RBP6.78□□□□□ -1.32
NFKB1-208ENST00000509165 KRTAP5-3Q6L8H2 238 aa6.78□□□□□ -1.32
NFKB1-208ENST00000509165 CCDC81Q6ZN84 652 aa6.78□□□□□ -1.32
NFKB1-208ENST00000509165 RUFY4Q6ZNE9 571 aa6.78□□□□□ -1.32
NFKB1-208ENST00000509165 LSRQ86X29 649 aaPredicted RBP6.78□□□□□ -1.32
NFKB1-208ENST00000509165 ZNF512BQ96KM6 892 aaPredicted RBP6.78□□□□□ -1.32
NFKB1-208ENST00000509165 SLC6A18Q96N87 628 aa6.78□□□□□ -1.32
NFKB1-208ENST00000509165 TM9SF2Q99805 663 aa6.78□□□□□ -1.32
NFKB1-208ENST00000509165 IGSF5Q9NSI5 407 aa6.78□□□□□ -1.32
NFKB1-208ENST00000509165 CTNND2Q9UQB3 1225 aa6.78□□□□□ -1.32
NFKB1-208ENST00000509165 SMARCA4P51532 1647 aa6.78□□□□□ -1.32
NFKB1-208ENST00000509165 GIPRP48546 466 aa6.77□□□□□ -1.33
NFKB1-208ENST00000509165 RBM25P49756 843 aaKnown RBP6.77□□□□□ -1.33
NFKB1-208ENST00000509165 ZYXQ15942 572 aaKnown RBP6.77□□□□□ -1.33
NFKB1-208ENST00000509165 CREG2Q8IUH2 290 aa6.77□□□□□ -1.33
NFKB1-208ENST00000509165 HDAC8Q9BY41 377 aa6.77□□□□□ -1.33
NFKB1-208ENST00000509165 DUSP13Q9UII6 198 aa6.77□□□□□ -1.33
NFKB1-208ENST00000509165 CARMIL2Q6F5E8 1435 aa6.76□□□□□ -1.33
NFKB1-208ENST00000509165 NMIQ13287 307 aaPredicted RBP6.76□□□□□ -1.33
NFKB1-208ENST00000509165 TMC3Q7Z5M5 1100 aa6.76□□□□□ -1.33
NFKB1-208ENST00000509165 ENOX1Q8TC92 643 aaKnown RBP6.76□□□□□ -1.33
NFKB1-208ENST00000509165 ALPK1Q96QP1 1244 aa6.76□□□□□ -1.33
NFKB1-208ENST00000509165 PRDM14Q9GZV8 571 aa6.76□□□□□ -1.33
NFKB1-208ENST00000509165 SUCOQ9UBS9 1254 aaKnown RBP6.76□□□□□ -1.33
NFKB1-208ENST00000509165 PCDHA11Q9Y5I1 949 aa6.76□□□□□ -1.33
NFKB1-208ENST00000509165 CADPSQ9ULU8 1353 aa6.75□□□□□ -1.33
NFKB1-208ENST00000509165 DNAJC25-GNG10A0A024R161 153 aa6.75□□□□□ -1.33
NFKB1-208ENST00000509165 C9IYK1 514 aa6.75□□□□□ -1.33
NFKB1-208ENST00000509165 GUCY2CP25092 1073 aa6.75□□□□□ -1.33
NFKB1-208ENST00000509165 ERCC5P28715 1186 aaPredicted RBP6.75□□□□□ -1.33
NFKB1-208ENST00000509165 NASPP49321 788 aaPredicted RBP6.75□□□□□ -1.33
NFKB1-208ENST00000509165 EGR3Q06889 387 aa6.75□□□□□ -1.33
NFKB1-208ENST00000509165 RALGPS1Q5JS13 557 aa6.75□□□□□ -1.33
NFKB1-208ENST00000509165 LCE5AQ5TCM9 118 aa6.75□□□□□ -1.33
NFKB1-208ENST00000509165 FBXW10Q5XX13 1052 aa6.75□□□□□ -1.33
NFKB1-208ENST00000509165 UNC5AQ6ZN44 842 aa6.75□□□□□ -1.33
NFKB1-208ENST00000509165 SYTL5Q8TDW5 730 aaPredicted RBP6.75□□□□□ -1.33
NFKB1-208ENST00000509165 SHDQ96IW2 340 aa6.75□□□□□ -1.33
NFKB1-208ENST00000509165 SEC16BQ96JE7 1060 aa6.75□□□□□ -1.33
NFKB1-208ENST00000509165 CCSER2Q9H7U1 834 aa6.75□□□□□ -1.33
NFKB1-208ENST00000509165 INPP5FQ9Y2H2 1132 aa6.75□□□□□ -1.33
NFKB1-208ENST00000509165 ZNF281Q9Y2X9 895 aa6.75□□□□□ -1.33
NFKB1-208ENST00000509165 ZNF608Q9ULD9 1512 aaPredicted RBP6.75□□□□□ -1.33
NFKB1-208ENST00000509165 FAM86C2PA6NEL3 165 aa6.74□□□□□ -1.33
NFKB1-208ENST00000509165 BIN1O00499 593 aa6.74□□□□□ -1.33
NFKB1-208ENST00000509165 SHOXO15266 292 aa6.74□□□□□ -1.33
NFKB1-208ENST00000509165 GDNFP39905 211 aa6.74□□□□□ -1.33
NFKB1-208ENST00000509165 PMS1P54277 932 aaKnown RBP6.74□□□□□ -1.33
NFKB1-208ENST00000509165 EIF6P56537 245 aaKnown RBP6.74□□□□□ -1.33
NFKB1-208ENST00000509165 CHMP4BP1P59074 171 aa6.74□□□□□ -1.33
NFKB1-208ENST00000509165 TEKQ02763 1124 aa6.74□□□□□ -1.33
NFKB1-208ENST00000509165 PPFIBP1Q86W92 1011 aa6.74□□□□□ -1.33
NFKB1-208ENST00000509165 DAGLBQ8NCG7 672 aa6.74□□□□□ -1.33
NFKB1-208ENST00000509165 DHRS1Q96LJ7 313 aa6.74□□□□□ -1.33
NFKB1-208ENST00000509165 SRRTQ9BXP5 876 aaKnown RBP6.74□□□□□ -1.33
NFKB1-208ENST00000509165 ADAMTS10Q9H324 1103 aa6.74□□□□□ -1.33
NFKB1-208ENST00000509165 SLAMF8Q9P0V8 285 aa6.74□□□□□ -1.33
NFKB1-208ENST00000509165 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.74□□□□□ -1.33
NFKB1-208ENST00000509165 LTBP3Q9NS15 1303 aa6.74□□□□□ -1.33
NFKB1-208ENST00000509165 CHD1O14646 1710 aa6.73□□□□□ -1.33
NFKB1-208ENST00000509165 SIGLEC6O43699 453 aa6.73□□□□□ -1.33
NFKB1-208ENST00000509165 ATF4P18848 351 aaPredicted RBP6.73□□□□□ -1.33
NFKB1-208ENST00000509165 AUHQ13825 339 aaKnown RBP6.73□□□□□ -1.33
NFKB1-208ENST00000509165 FYB2Q5VWT5 728 aa6.73□□□□□ -1.33
NFKB1-208ENST00000509165 SPOCD1Q6ZMY3 1216 aa6.73□□□□□ -1.33
NFKB1-208ENST00000509165 USHBP1Q8N6Y0 703 aa6.73□□□□□ -1.33
NFKB1-208ENST00000509165 ASIC4Q96FT7 647 aa6.73□□□□□ -1.33
NFKB1-208ENST00000509165 TCTN2Q96GX1 697 aa6.73□□□□□ -1.33
NFKB1-208ENST00000509165 TMEM59LQ9UK28 342 aa6.73□□□□□ -1.33
NFKB1-208ENST00000509165 CEP164Q9UPV0 1460 aa6.73□□□□□ -1.33
NFKB1-208ENST00000509165 URB2Q14146 1524 aaKnown RBP6.72□□□□□ -1.33
NFKB1-208ENST00000509165 PRAMEF1O95521 474 aa6.72□□□□□ -1.33
NFKB1-208ENST00000509165 ZGLP1P0C6A0 271 aa6.72□□□□□ -1.33
NFKB1-208ENST00000509165 LTKP29376 864 aa6.72□□□□□ -1.33
NFKB1-208ENST00000509165 CLEC16AQ2KHT3 1053 aa6.72□□□□□ -1.33
NFKB1-208ENST00000509165 TTC6Q86TZ1 520 aa6.72□□□□□ -1.33
NFKB1-208ENST00000509165 C7orf61Q8IZ16 206 aa6.72□□□□□ -1.33
NFKB1-208ENST00000509165 ZNF655Q8N720 491 aaPredicted RBP6.72□□□□□ -1.33
NFKB1-208ENST00000509165 C19orf47Q8N9M1 422 aaKnown RBP6.72□□□□□ -1.33
NFKB1-208ENST00000509165 MKRN2Q9H000 416 aaKnown RBP6.72□□□□□ -1.33
NFKB1-208ENST00000509165 SP110Q9HB58 689 aa6.72□□□□□ -1.33
NFKB1-208ENST00000509165 EBF1Q9UH73 591 aa6.72□□□□□ -1.33
NFKB1-208ENST00000509165 ZNF214Q9UL59 606 aaPredicted RBP6.72□□□□□ -1.33
NFKB1-208ENST00000509165 MINPP1Q9UNW1 487 aa6.72□□□□□ -1.33
NFKB1-208ENST00000509165 A0A1W2PQH9 124 aa6.71□□□□□ -1.34
NFKB1-208ENST00000509165 ANKRD39Q53RE8 183 aa6.71□□□□□ -1.34
NFKB1-208ENST00000509165 AXDND1Q5T1B0 1012 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms