RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 MYH7P12883 1935 aa12.04□□□□□ -0.48
UBE2D3-227ENST00000508818 SLC25A27O95847 323 aa12.04□□□□□ -0.48
UBE2D3-227ENST00000508818 HOXC6P09630 235 aa12.04□□□□□ -0.48
UBE2D3-227ENST00000508818 GRB14Q14449 540 aa12.04□□□□□ -0.48
UBE2D3-227ENST00000508818 KIAA1755Q5JYT7 1200 aa12.04□□□□□ -0.48
UBE2D3-227ENST00000508818 ATG4CQ96DT6 458 aa12.04□□□□□ -0.48
UBE2D3-227ENST00000508818 CTDP1Q9Y5B0 961 aaPredicted RBP12.04□□□□□ -0.48
UBE2D3-227ENST00000508818 MYH8P13535 1937 aa12.03□□□□□ -0.48
UBE2D3-227ENST00000508818 C19orf67A6NJJ6 358 aa12.03□□□□□ -0.48
UBE2D3-227ENST00000508818 M0R2C6 588 aa12.03□□□□□ -0.48
UBE2D3-227ENST00000508818 MSCO60682 206 aa12.03□□□□□ -0.48
UBE2D3-227ENST00000508818 FCER1AP12319 257 aa12.03□□□□□ -0.48
UBE2D3-227ENST00000508818 RASA1P20936 1047 aa12.03□□□□□ -0.48
UBE2D3-227ENST00000508818 ADORA2AP29274 412 aa12.03□□□□□ -0.48
UBE2D3-227ENST00000508818 PDE4BQ07343 736 aa12.03□□□□□ -0.48
UBE2D3-227ENST00000508818 FAM83BQ5T0W9 1011 aa12.03□□□□□ -0.48
UBE2D3-227ENST00000508818 C7orf61Q8IZ16 206 aa12.03□□□□□ -0.48
UBE2D3-227ENST00000508818 IFNL3Q8IZI9 196 aa12.03□□□□□ -0.48
UBE2D3-227ENST00000508818 OTUD7AQ8TE49 926 aaPredicted RBP12.03□□□□□ -0.48
UBE2D3-227ENST00000508818 NAPBQ9H115 298 aa12.03□□□□□ -0.48
UBE2D3-227ENST00000508818 FLRT1Q9NZU1 646 aa12.03□□□□□ -0.48
UBE2D3-227ENST00000508818 CLIP2Q9UDT6 1046 aa12.03□□□□□ -0.48
UBE2D3-227ENST00000508818 PLXNB2O15031 1838 aa12.02□□□□□ -0.48
UBE2D3-227ENST00000508818 PRDM1O75626 825 aa12.02□□□□□ -0.49
UBE2D3-227ENST00000508818 CYP2C19P33261 490 aa12.02□□□□□ -0.49
UBE2D3-227ENST00000508818 STAT3P40763 770 aa12.02□□□□□ -0.49
UBE2D3-227ENST00000508818 KCTD2Q14681 263 aa12.02□□□□□ -0.49
UBE2D3-227ENST00000508818 NPLOC4Q8TAT6 608 aa12.02□□□□□ -0.49
UBE2D3-227ENST00000508818 PI4K2BQ8TCG2 481 aa12.02□□□□□ -0.49
UBE2D3-227ENST00000508818 NYAP2Q9P242 653 aa12.02□□□□□ -0.49
UBE2D3-227ENST00000508818 RBM27Q9P2N5 1060 aaKnown RBP12.02□□□□□ -0.49
UBE2D3-227ENST00000508818 ISY1Q9ULR0 285 aaKnown RBP12.02□□□□□ -0.49
UBE2D3-227ENST00000508818 TRIOBPQ9H2D6 2365 aa12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 F5H6K3 240 aa12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 TSPY3P0CV98 308 aa12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 TSPY8P0CW00 308 aa12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 COPB2P35606 906 aa12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 SLC4A3P48751 1232 aa12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 FXR1P51114 621 aaKnown RBP eCLIP12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 KLRC3Q07444 240 aa12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 TMEM132BQ14DG7 1078 aa12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 ZMYM1Q5SVZ6 1142 aa12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 OLFML2BQ68BL8 750 aa12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 LHX8Q68G74 356 aa12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 ABRAQ8N0Z2 381 aa12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 EVI5LQ96CN4 794 aa12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 SEC62Q99442 399 aaKnown RBP12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 MMP19Q99542 508 aa12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 SLF1Q9BQI6 1058 aa12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 FBXO28Q9NVF7 368 aa12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 STAP2Q9UGK3 403 aa12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 DDX20Q9UHI6 824 aaKnown RBP12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 PPP1R9AQ9ULJ8 1098 aa12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 MKI67P46013 3256 aaKnown RBP12.01□□□□□ -0.49
UBE2D3-227ENST00000508818 VWA5AO00534 786 aa12□□□□□ -0.49
UBE2D3-227ENST00000508818 COBLO75128 1261 aa12□□□□□ -0.49
UBE2D3-227ENST00000508818 ZBED4O75132 1171 aa12□□□□□ -0.49
UBE2D3-227ENST00000508818 HDAC1Q13547 482 aaPredicted RBP12□□□□□ -0.49
UBE2D3-227ENST00000508818 AAMPQ13685 434 aa12□□□□□ -0.49
UBE2D3-227ENST00000508818 RIOX2Q8IUF8 465 aa12□□□□□ -0.49
UBE2D3-227ENST00000508818 PRPF38AQ8NAV1 312 aaKnown RBP12□□□□□ -0.49
UBE2D3-227ENST00000508818 ARRDC4Q8NCT1 418 aa12□□□□□ -0.49
UBE2D3-227ENST00000508818 NUP88Q99567 741 aaPredicted RBP12□□□□□ -0.49
UBE2D3-227ENST00000508818 SENP6Q9GZR1 1112 aaPredicted RBP12□□□□□ -0.49
UBE2D3-227ENST00000508818 RWDD1Q9H446 243 aaPredicted RBP12□□□□□ -0.49
UBE2D3-227ENST00000508818 EPB41L4AQ9HCS5 686 aaPredicted RBP12□□□□□ -0.49
UBE2D3-227ENST00000508818 ZMYND8Q9ULU4 1186 aaPredicted RBP12□□□□□ -0.49
UBE2D3-227ENST00000508818 ADAMTS5Q9UNA0 930 aa12□□□□□ -0.49
UBE2D3-227ENST00000508818 BRCA2P51587 3418 aa11.99□□□□□ -0.49
UBE2D3-227ENST00000508818 TTLL1O95922 423 aa11.99□□□□□ -0.49
UBE2D3-227ENST00000508818 NDUFB10O96000 172 aa11.99□□□□□ -0.49
UBE2D3-227ENST00000508818 MNX1P50219 401 aaPredicted RBP11.99□□□□□ -0.49
UBE2D3-227ENST00000508818 TFAP4Q01664 338 aa11.99□□□□□ -0.49
UBE2D3-227ENST00000508818 PPARAQ07869 468 aa11.99□□□□□ -0.49
UBE2D3-227ENST00000508818 FAM47AQ5JRC9 791 aa11.99□□□□□ -0.49
UBE2D3-227ENST00000508818 PPP4R3BQ5MIZ7 849 aa11.99□□□□□ -0.49
UBE2D3-227ENST00000508818 DDX11Q96FC9 970 aa11.99□□□□□ -0.49
UBE2D3-227ENST00000508818 MTMR4Q9NYA4 1195 aa11.99□□□□□ -0.49
UBE2D3-227ENST00000508818 ROBO3Q96MS0 1386 aa11.99□□□□□ -0.49
UBE2D3-227ENST00000508818 TRIM6-TRIM34B2RNG4 842 aa11.98□□□□□ -0.49
UBE2D3-227ENST00000508818 PGK2P07205 417 aa11.98□□□□□ -0.49
UBE2D3-227ENST00000508818 CYBAP13498 195 aa11.98□□□□□ -0.49
UBE2D3-227ENST00000508818 SYN1P17600 705 aa11.98□□□□□ -0.49
UBE2D3-227ENST00000508818 PDE1AP54750 535 aa11.98□□□□□ -0.49
UBE2D3-227ENST00000508818 SLFN13Q68D06 897 aa11.98□□□□□ -0.49
UBE2D3-227ENST00000508818 SNRNP48Q6IEG0 339 aaKnown RBP11.98□□□□□ -0.49
UBE2D3-227ENST00000508818 CCDC129Q6ZRS4 1044 aa11.98□□□□□ -0.49
UBE2D3-227ENST00000508818 CPXCR1Q8N123 301 aa11.98□□□□□ -0.49
UBE2D3-227ENST00000508818 TRPV1Q8NER1 839 aa11.98□□□□□ -0.49
UBE2D3-227ENST00000508818 NEDD1Q8NHV4 660 aa11.98□□□□□ -0.49
UBE2D3-227ENST00000508818 MKL1Q969V6 931 aa11.98□□□□□ -0.49
UBE2D3-227ENST00000508818 KIFC2Q96AC6 838 aa11.98□□□□□ -0.49
UBE2D3-227ENST00000508818 CEP95Q96GE4 821 aa11.98□□□□□ -0.49
UBE2D3-227ENST00000508818 MAML3Q96JK9 1138 aa11.98□□□□□ -0.49
UBE2D3-227ENST00000508818 TEX13BQ9BXU2 312 aa11.98□□□□□ -0.49
UBE2D3-227ENST00000508818 HELLSQ9NRZ9 838 aa11.98□□□□□ -0.49
UBE2D3-227ENST00000508818 FEM1BQ9UK73 627 aa11.98□□□□□ -0.49
UBE2D3-227ENST00000508818 PFASO15067 1338 aa11.97□□□□□ -0.49
UBE2D3-227ENST00000508818 IGKV6D-41A0A0C4DH26 115 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms