RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 KCNJ14Q9UNX9 436 aa13.21□□□□□ -0.29
PRPF40B-203ENST00000508736 V9GY48 417 aaPredicted RBP13.21□□□□□ -0.29
PRPF40B-203ENST00000508736 MYH1P12882 1939 aa13.21□□□□□ -0.29
PRPF40B-203ENST00000508736 MYL5Q02045 173 aa13.21□□□□□ -0.3
PRPF40B-203ENST00000508736 ZNF579Q8NAF0 562 aaKnown RBP13.21□□□□□ -0.3
PRPF40B-203ENST00000508736 SUPT20HQ8NEM7 779 aa13.21□□□□□ -0.3
PRPF40B-203ENST00000508736 C16orf45Q96MC5 204 aaPredicted RBP13.21□□□□□ -0.3
PRPF40B-203ENST00000508736 LZTS2Q9BRK4 669 aa13.21□□□□□ -0.3
PRPF40B-203ENST00000508736 BRMS1Q9HCU9 246 aa13.21□□□□□ -0.3
PRPF40B-203ENST00000508736 PAXBP1Q9Y5B6 917 aa13.21□□□□□ -0.3
PRPF40B-203ENST00000508736 BMP15O95972 392 aa13.2□□□□□ -0.3
PRPF40B-203ENST00000508736 PTPREP23469 700 aa13.2□□□□□ -0.3
PRPF40B-203ENST00000508736 KRT2P35908 639 aa13.2□□□□□ -0.3
PRPF40B-203ENST00000508736 GABPAQ06546 454 aa13.2□□□□□ -0.3
PRPF40B-203ENST00000508736 PFKFB3Q16875 520 aaPredicted RBP13.2□□□□□ -0.3
PRPF40B-203ENST00000508736 KANK3Q6NY19 840 aa13.2□□□□□ -0.3
PRPF40B-203ENST00000508736 CLIC6Q96NY7 704 aa13.2□□□□□ -0.3
PRPF40B-203ENST00000508736 SH3GLB2Q9NR46 395 aa13.2□□□□□ -0.3
PRPF40B-203ENST00000508736 IFNKQ9P0W0 207 aa13.2□□□□□ -0.3
PRPF40B-203ENST00000508736 SWAP70Q9UH65 585 aa13.2□□□□□ -0.3
PRPF40B-203ENST00000508736 DACH1Q9UI36 760 aa13.2□□□□□ -0.3
PRPF40B-203ENST00000508736 USP17L3A6NCW0 530 aa13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 USP17L4A6NCW7 530 aa13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 SCG2P13521 617 aa13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 TNNT1P13805 278 aa13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 SMARCA1P28370 1054 aa13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 TOB1P50616 345 aaPredicted RBP13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 PNOCQ13519 176 aa13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 SLC4A8Q2Y0W8 1093 aa13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 CCDC93Q567U6 631 aa13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 USP17L1Q7RTZ2 530 aa13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 SLC44A5Q8NCS7 719 aa13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 SHISA4Q96DD7 197 aa13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 ZDHHC15Q96MV8 337 aa13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 XPO4Q9C0E2 1151 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 FBXO2Q9UK22 296 aaPredicted RBP13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 ZNF646O15015 1829 aaPredicted RBP13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 KIF2AO00139 706 aaPredicted RBP13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 RIOK3O14730 519 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 NPM3O75607 178 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 CCZ1BP86790 482 aa13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 CCZ1P86791 482 aaPredicted RBP13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 NCAPHQ15003 741 aa13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 DACT2Q5SW24 774 aa13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 SOGA3Q5TF21 947 aa13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 APOBEC3HQ6NTF7 200 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 METTL16Q86W50 562 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 RTKN2Q8IZC4 609 aa13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 TMEM47Q9BQJ4 181 aa13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 KCND1Q9NSA2 647 aa13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 VPS54Q9P1Q0 977 aa13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 MAD2L2Q9UI95 211 aa13.19□□□□□ -0.3
PRPF40B-203ENST00000508736 PALM3A6NDB9 673 aaPredicted RBP13.18□□□□□ -0.3
PRPF40B-203ENST00000508736 ECE2O60344 883 aa13.18□□□□□ -0.3
PRPF40B-203ENST00000508736 SFPQP23246 707 aaKnown RBP eCLIP13.18□□□□□ -0.3
PRPF40B-203ENST00000508736 FANCCQ00597 558 aa13.18□□□□□ -0.3
PRPF40B-203ENST00000508736 NR5A1Q13285 461 aa13.18□□□□□ -0.3
PRPF40B-203ENST00000508736 LONRF3Q496Y0 759 aa13.18□□□□□ -0.3
PRPF40B-203ENST00000508736 CDC42EP5Q6NZY7 148 aa13.18□□□□□ -0.3
PRPF40B-203ENST00000508736 TMC6Q7Z403 805 aa13.18□□□□□ -0.3
PRPF40B-203ENST00000508736 TNFRSF25Q93038 417 aa13.18□□□□□ -0.3
PRPF40B-203ENST00000508736 EHD4Q9H223 541 aa13.18□□□□□ -0.3
PRPF40B-203ENST00000508736 DBNDD1Q9H9R9 158 aa13.18□□□□□ -0.3
PRPF40B-203ENST00000508736 USP40Q9NVE5 1235 aa13.18□□□□□ -0.3
PRPF40B-203ENST00000508736 STX8Q9UNK0 236 aa13.18□□□□□ -0.3
PRPF40B-203ENST00000508736 SRPRBQ9Y5M8 271 aaKnown RBP13.18□□□□□ -0.3
PRPF40B-203ENST00000508736 TRIM75PA6NK02 468 aa13.17□□□□□ -0.3
PRPF40B-203ENST00000508736 F8W031 263 aaPredicted RBP13.17□□□□□ -0.3
PRPF40B-203ENST00000508736 TOP1P11387 765 aaKnown RBP13.17□□□□□ -0.3
PRPF40B-203ENST00000508736 CALML3P27482 149 aa13.17□□□□□ -0.3
PRPF40B-203ENST00000508736 CRKP46108 304 aa13.17□□□□□ -0.3
PRPF40B-203ENST00000508736 KCNJ6P48051 423 aa13.17□□□□□ -0.3
PRPF40B-203ENST00000508736 TRAPPC10P48553 1259 aa13.17□□□□□ -0.3
PRPF40B-203ENST00000508736 POSTNQ15063 836 aa13.17□□□□□ -0.3
PRPF40B-203ENST00000508736 NPY5RQ15761 445 aa13.17□□□□□ -0.3
PRPF40B-203ENST00000508736 TRIML1Q8N9V2 468 aa13.17□□□□□ -0.3
PRPF40B-203ENST00000508736 OXER1Q8TDS5 423 aa13.17□□□□□ -0.3
PRPF40B-203ENST00000508736 LMOD1P29536 600 aaPredicted RBP13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 PTPN14Q15678 1187 aa13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 GPR162Q16538 588 aa13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 CEP135Q66GS9 1140 aa13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 GALNT17Q6IS24 598 aa13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 ARHGAP27Q6ZUM4 889 aa13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 CCDC112Q8NEF3 446 aa13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 SPZ1Q9BXG8 430 aa13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 IDI2Q9BXS1 227 aa13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 CABP5Q9NP86 173 aa13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 DDX4Q9NQI0 724 aaKnown RBP13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 SERPINB13Q9UIV8 391 aa13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 SERPINA10Q9UK55 444 aa13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 BRCA1P38398 1863 aaKnown RBP13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 IGKV6D-41A0A0C4DH26 115 aa13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 CCP110O43303 1012 aa13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 SERPINC1P01008 464 aa13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 YBX3P16989 372 aaKnown RBP eCLIP13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 ARID5BQ14865 1188 aa13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 PPP4R3BQ5MIZ7 849 aa13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 MLKLQ8NB16 471 aa13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 SMARCE1Q969G3 411 aa13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 FERMT2Q96AC1 680 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms