RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 IDH1O75874 414 aaKnown RBP11.43□□□□□ -0.58
NEDD9-211ENST00000508546 CLTBP09497 229 aa11.43□□□□□ -0.58
NEDD9-211ENST00000508546 TRIM27P14373 513 aa11.43□□□□□ -0.58
NEDD9-211ENST00000508546 IGFBP4P22692 258 aa11.43□□□□□ -0.58
NEDD9-211ENST00000508546 PLCD1P51178 756 aa11.43□□□□□ -0.58
NEDD9-211ENST00000508546 SEPT2Q15019 361 aa11.43□□□□□ -0.58
NEDD9-211ENST00000508546 PRAMEF19Q5SWL8 479 aa11.43□□□□□ -0.58
NEDD9-211ENST00000508546 MAGEB6Q8N7X4 407 aa11.43□□□□□ -0.58
NEDD9-211ENST00000508546 SSH3Q8TE77 659 aa11.43□□□□□ -0.58
NEDD9-211ENST00000508546 MAML3Q96JK9 1138 aa11.43□□□□□ -0.58
NEDD9-211ENST00000508546 TANGO6Q9C0B7 1094 aa11.43□□□□□ -0.58
NEDD9-211ENST00000508546 DBNLQ9UJU6 430 aaKnown RBP11.43□□□□□ -0.58
NEDD9-211ENST00000508546 BAZ2AQ9UIF9 1905 aaKnown RBP11.43□□□□□ -0.58
NEDD9-211ENST00000508546 WDFY4Q6ZS81 3184 aa11.42□□□□□ -0.58
NEDD9-211ENST00000508546 ZNF316A6NFI3 1004 aaPredicted RBP11.42□□□□□ -0.58
NEDD9-211ENST00000508546 MYCNP04198 464 aaPredicted RBP11.42□□□□□ -0.58
NEDD9-211ENST00000508546 RARBP10826 455 aa11.42□□□□□ -0.58
NEDD9-211ENST00000508546 RAG1P15918 1043 aa11.42□□□□□ -0.58
NEDD9-211ENST00000508546 DSG3P32926 999 aa11.42□□□□□ -0.58
NEDD9-211ENST00000508546 OS9Q13438 667 aaPredicted RBP11.42□□□□□ -0.58
NEDD9-211ENST00000508546 RIOK1Q9BRS2 568 aaKnown RBP11.42□□□□□ -0.58
NEDD9-211ENST00000508546 XPNPEP3Q9NQH7 507 aa11.42□□□□□ -0.58
NEDD9-211ENST00000508546 NOP58Q9Y2X3 529 aaKnown RBP11.42□□□□□ -0.58
NEDD9-211ENST00000508546 MCM3APO60318 1980 aa11.41□□□□□ -0.58
NEDD9-211ENST00000508546 SLC25A27O95847 323 aa11.41□□□□□ -0.58
NEDD9-211ENST00000508546 FCER1AP12319 257 aa11.41□□□□□ -0.58
NEDD9-211ENST00000508546 ATP8B2P98198 1209 aa11.41□□□□□ -0.58
NEDD9-211ENST00000508546 NHLH1Q02575 133 aa11.41□□□□□ -0.58
NEDD9-211ENST00000508546 FPGSQ05932 587 aa11.41□□□□□ -0.58
NEDD9-211ENST00000508546 ANKRD33Q7Z3H0 272 aa11.41□□□□□ -0.58
NEDD9-211ENST00000508546 RNF180Q86T96 592 aa11.41□□□□□ -0.58
NEDD9-211ENST00000508546 NCAPG2Q86XI2 1143 aa11.41□□□□□ -0.58
NEDD9-211ENST00000508546 TOX2Q96NM4 488 aa11.41□□□□□ -0.58
NEDD9-211ENST00000508546 DIS3Q9Y2L1 958 aaKnown RBP11.41□□□□□ -0.58
NEDD9-211ENST00000508546 ZDBF2Q9HCK1 2354 aa11.41□□□□□ -0.58
NEDD9-211ENST00000508546 PRRC2BQ5JSZ5 2229 aaKnown RBP11.4□□□□□ -0.58
NEDD9-211ENST00000508546 A0A1W2PQ45 241 aaPredicted RBP11.4□□□□□ -0.58
NEDD9-211ENST00000508546 A0A1W2PQY0 241 aa11.4□□□□□ -0.58
NEDD9-211ENST00000508546 SURF6O75683 361 aaKnown RBP11.4□□□□□ -0.58
NEDD9-211ENST00000508546 POLR3DP05423 398 aaPredicted RBP11.4□□□□□ -0.58
NEDD9-211ENST00000508546 PLS1Q14651 629 aa11.4□□□□□ -0.58
NEDD9-211ENST00000508546 KIAA1755Q5JYT7 1200 aa11.4□□□□□ -0.58
NEDD9-211ENST00000508546 TMEM179Q6ZVK1 233 aa11.4□□□□□ -0.58
NEDD9-211ENST00000508546 MICALL1Q8N3F8 863 aa11.4□□□□□ -0.58
NEDD9-211ENST00000508546 EAF2Q96CJ1 260 aaPredicted RBP11.4□□□□□ -0.58
NEDD9-211ENST00000508546 ATG4CQ96DT6 458 aa11.4□□□□□ -0.58
NEDD9-211ENST00000508546 TINF2Q9BSI4 451 aa11.4□□□□□ -0.58
NEDD9-211ENST00000508546 TSEN34Q9BSV6 310 aaKnown RBP11.4□□□□□ -0.58
NEDD9-211ENST00000508546 TLR7Q9NYK1 1049 aaKnown RBP11.4□□□□□ -0.58
NEDD9-211ENST00000508546 ADAMTS5Q9UNA0 930 aa11.4□□□□□ -0.58
NEDD9-211ENST00000508546 TNNQ9UQP3 1299 aa11.4□□□□□ -0.58
NEDD9-211ENST00000508546 MPHOSPH10O00566 681 aaKnown RBP11.39□□□□□ -0.59
NEDD9-211ENST00000508546 WDR46O15213 610 aaKnown RBP11.39□□□□□ -0.59
NEDD9-211ENST00000508546 PQBP1O60828 265 aaKnown RBP11.39□□□□□ -0.59
NEDD9-211ENST00000508546 FLOT1O75955 427 aa11.39□□□□□ -0.59
NEDD9-211ENST00000508546 PGK1P00558 417 aa11.39□□□□□ -0.59
NEDD9-211ENST00000508546 AKR1A1P14550 325 aa11.39□□□□□ -0.59
NEDD9-211ENST00000508546 FAAP100Q0VG06 881 aa11.39□□□□□ -0.59
NEDD9-211ENST00000508546 TMEM132BQ14DG7 1078 aa11.39□□□□□ -0.59
NEDD9-211ENST00000508546 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.39□□□□□ -0.59
NEDD9-211ENST00000508546 CRNKL1Q9BZJ0 848 aaKnown RBP11.39□□□□□ -0.59
NEDD9-211ENST00000508546 CCDC8Q9H0W5 538 aaPredicted RBP11.39□□□□□ -0.59
NEDD9-211ENST00000508546 ANTXR1Q9H6X2 564 aa11.39□□□□□ -0.59
NEDD9-211ENST00000508546 SH2D4AQ9H788 454 aa11.39□□□□□ -0.59
NEDD9-211ENST00000508546 TMEM39AQ9NV64 488 aa11.39□□□□□ -0.59
NEDD9-211ENST00000508546 TMX2Q9Y320 296 aa11.39□□□□□ -0.59
NEDD9-211ENST00000508546 ZNF318Q5VUA4 2279 aa11.39□□□□□ -0.59
NEDD9-211ENST00000508546 MYH7P12883 1935 aa11.39□□□□□ -0.59
NEDD9-211ENST00000508546 MAGEB6P1A0A0J9YX57 407 aa11.38□□□□□ -0.59
NEDD9-211ENST00000508546 DCDC2CA8MYV0 355 aa11.38□□□□□ -0.59
NEDD9-211ENST00000508546 SMIM22K7EJ46 135 aa11.38□□□□□ -0.59
NEDD9-211ENST00000508546 ADAMTS4O75173 837 aa11.38□□□□□ -0.59
NEDD9-211ENST00000508546 TIMP1P01033 207 aa11.38□□□□□ -0.59
NEDD9-211ENST00000508546 ZNF865P0CJ78 1059 aaPredicted RBP11.38□□□□□ -0.59
NEDD9-211ENST00000508546 AAK1Q2M2I8 961 aa11.38□□□□□ -0.59
NEDD9-211ENST00000508546 ZNF792Q3KQV3 632 aa11.38□□□□□ -0.59
NEDD9-211ENST00000508546 CCDC129Q6ZRS4 1044 aa11.38□□□□□ -0.59
NEDD9-211ENST00000508546 RIOX2Q8IUF8 465 aa11.38□□□□□ -0.59
NEDD9-211ENST00000508546 SIAH1Q8IUQ4 282 aa11.38□□□□□ -0.59
NEDD9-211ENST00000508546 SLC44A5Q8NCS7 719 aa11.38□□□□□ -0.59
NEDD9-211ENST00000508546 NUP133Q8WUM0 1156 aa11.38□□□□□ -0.59
NEDD9-211ENST00000508546 CLUAP1Q96AJ1 413 aa11.38□□□□□ -0.59
NEDD9-211ENST00000508546 MMP19Q99542 508 aa11.38□□□□□ -0.59
NEDD9-211ENST00000508546 TSPYL2Q9H2G4 693 aaPredicted RBP11.38□□□□□ -0.59
NEDD9-211ENST00000508546 VCPKMTQ9H867 229 aa11.38□□□□□ -0.59
NEDD9-211ENST00000508546 ARHGEF10LQ9HCE6 1279 aa11.38□□□□□ -0.59
NEDD9-211ENST00000508546 MCM9Q9NXL9 1143 aa11.38□□□□□ -0.59
NEDD9-211ENST00000508546 SWAP70Q9UH65 585 aa11.38□□□□□ -0.59
NEDD9-211ENST00000508546 BRWD1Q9NSI6 2320 aa11.38□□□□□ -0.59
NEDD9-211ENST00000508546 TRANK1O15050 2925 aa11.38□□□□□ -0.59
NEDD9-211ENST00000508546 MOXD2PA6NHM9 499 aa11.37□□□□□ -0.59
NEDD9-211ENST00000508546 ERC2O15083 957 aa11.37□□□□□ -0.59
NEDD9-211ENST00000508546 BCAR3O75815 825 aa11.37□□□□□ -0.59
NEDD9-211ENST00000508546 TAL1P17542 331 aaPredicted RBP11.37□□□□□ -0.59
NEDD9-211ENST00000508546 COPB2P35606 906 aa11.37□□□□□ -0.59
NEDD9-211ENST00000508546 ACLYP53396 1101 aa11.37□□□□□ -0.59
NEDD9-211ENST00000508546 EVX2Q03828 476 aa11.37□□□□□ -0.59
NEDD9-211ENST00000508546 TTF1Q15361 905 aaPredicted RBP11.37□□□□□ -0.59
NEDD9-211ENST00000508546 RASIP1Q5U651 963 aa11.37□□□□□ -0.59
NEDD9-211ENST00000508546 MFSD5Q6N075 450 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms