RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 ZYXQ15942 572 aaKnown RBP11.99□□□□□ -0.49
HTT-204ENST00000508321 ASPRV1Q53RT3 343 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 SLFN13Q68D06 897 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 SYNE3Q6ZMZ3 975 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 NFXL1Q6ZNB6 911 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 IFNL1Q8IU54 200 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 NKX2-3Q8TAU0 364 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 CFHR5Q9BXR6 569 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 EMILIN3Q9NT22 766 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 SAGE1Q9NXZ1 904 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.99□□□□□ -0.49
HTT-204ENST00000508321 SLC12A7Q9Y666 1083 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 BTBD19C9JJ37 291 aa11.98□□□□□ -0.49
HTT-204ENST00000508321 ST18O60284 1047 aa11.98□□□□□ -0.49
HTT-204ENST00000508321 AOC2O75106 756 aa11.98□□□□□ -0.49
HTT-204ENST00000508321 PDHBP11177 359 aa11.98□□□□□ -0.49
HTT-204ENST00000508321 BMP3P12645 472 aa11.98□□□□□ -0.49
HTT-204ENST00000508321 KIF5BP33176 963 aa11.98□□□□□ -0.49
HTT-204ENST00000508321 EVCP57679 992 aa11.98□□□□□ -0.49
HTT-204ENST00000508321 IRX3P78415 501 aaPredicted RBP11.98□□□□□ -0.49
HTT-204ENST00000508321 Q6ZUG5 572 aa11.98□□□□□ -0.49
HTT-204ENST00000508321 CHST3Q7LGC8 479 aa11.98□□□□□ -0.49
HTT-204ENST00000508321 FAM160B2Q86V87 743 aa11.98□□□□□ -0.49
HTT-204ENST00000508321 ZNF654Q8IZM8 581 aa11.98□□□□□ -0.49
HTT-204ENST00000508321 UPF3BQ9BZI7 483 aaKnown RBP11.98□□□□□ -0.49
HTT-204ENST00000508321 TANGO6Q9C0B7 1094 aa11.98□□□□□ -0.49
HTT-204ENST00000508321 RPAP3Q9H6T3 665 aaPredicted RBP11.98□□□□□ -0.49
HTT-204ENST00000508321 PDRG1Q9NUG6 133 aa11.98□□□□□ -0.49
HTT-204ENST00000508321 PDHXO00330 501 aa11.97□□□□□ -0.49
HTT-204ENST00000508321 IGF2BP3O00425 579 aaKnown RBP eCLIP11.97□□□□□ -0.49
HTT-204ENST00000508321 RAD21O60216 631 aa11.97□□□□□ -0.49
HTT-204ENST00000508321 PARP1P09874 1014 aaKnown RBP11.97□□□□□ -0.49
HTT-204ENST00000508321 FDX1P10109 184 aa11.97□□□□□ -0.49
HTT-204ENST00000508321 STAT2P52630 851 aa11.97□□□□□ -0.49
HTT-204ENST00000508321 ZNF543Q08ER8 600 aa11.97□□□□□ -0.49
HTT-204ENST00000508321 TROAPQ12815 778 aa11.97□□□□□ -0.49
HTT-204ENST00000508321 GRM4Q14833 912 aa11.97□□□□□ -0.49
HTT-204ENST00000508321 CCDC96Q2M329 555 aa11.97□□□□□ -0.49
HTT-204ENST00000508321 TREML2Q5T2D2 321 aa11.97□□□□□ -0.49
HTT-204ENST00000508321 GPAT2Q6NUI2 795 aa11.97□□□□□ -0.49
HTT-204ENST00000508321 APOA5Q6Q788 366 aa11.97□□□□□ -0.49
HTT-204ENST00000508321 LBX2Q6XYB7 198 aa11.97□□□□□ -0.49
HTT-204ENST00000508321 SPICE1Q8N0Z3 855 aa11.97□□□□□ -0.49
HTT-204ENST00000508321 MB21D1Q8N884 522 aa11.97□□□□□ -0.49
HTT-204ENST00000508321 CTCFLQ8NI51 663 aaPredicted RBP11.97□□□□□ -0.49
HTT-204ENST00000508321 KIF2CQ99661 725 aa11.97□□□□□ -0.49
HTT-204ENST00000508321 RBM28Q9NW13 759 aaKnown RBP11.97□□□□□ -0.49
HTT-204ENST00000508321 FEM1BQ9UK73 627 aa11.97□□□□□ -0.49
HTT-204ENST00000508321 PNMA2Q9UL42 364 aa11.97□□□□□ -0.49
HTT-204ENST00000508321 MYH6P13533 1939 aa11.97□□□□□ -0.49
HTT-204ENST00000508321 COL11A1P12107 1806 aaPredicted RBP11.97□□□□□ -0.49
HTT-204ENST00000508321 CCDC196A0A1B0GTZ2 297 aa11.96□□□□□ -0.49
HTT-204ENST00000508321 ZBTB43O43298 467 aa11.96□□□□□ -0.49
HTT-204ENST00000508321 GCLCP48506 637 aaPredicted RBP11.96□□□□□ -0.49
HTT-204ENST00000508321 MCM2P49736 904 aa11.96□□□□□ -0.49
HTT-204ENST00000508321 GNAQP50148 359 aa11.96□□□□□ -0.49
HTT-204ENST00000508321 NEK4P51957 841 aa11.96□□□□□ -0.49
HTT-204ENST00000508321 TAF1CQ15572 869 aaPredicted RBP11.96□□□□□ -0.49
HTT-204ENST00000508321 FAM83BQ5T0W9 1011 aa11.96□□□□□ -0.49
HTT-204ENST00000508321 CATSPERGQ6ZRH7 1159 aa11.96□□□□□ -0.49
HTT-204ENST00000508321 FAM43AQ8N2R8 423 aa11.96□□□□□ -0.49
HTT-204ENST00000508321 SMCR8Q8TEV9 937 aaPredicted RBP11.96□□□□□ -0.49
HTT-204ENST00000508321 CHURC1Q8WUH1 139 aa11.96□□□□□ -0.49
HTT-204ENST00000508321 BRF1Q92994 677 aa11.96□□□□□ -0.49
HTT-204ENST00000508321 TCEANC2Q96MN5 208 aa11.96□□□□□ -0.49
HTT-204ENST00000508321 PTPN18Q99952 460 aa11.96□□□□□ -0.49
HTT-204ENST00000508321 SLF1Q9BQI6 1058 aa11.96□□□□□ -0.49
HTT-204ENST00000508321 LZTS2Q9BRK4 669 aa11.96□□□□□ -0.49
HTT-204ENST00000508321 BEGAINQ9BUH8 593 aa11.96□□□□□ -0.49
HTT-204ENST00000508321 LRRC2Q9BYS8 371 aa11.96□□□□□ -0.49
HTT-204ENST00000508321 PPP1R9AQ9ULJ8 1098 aa11.96□□□□□ -0.49
HTT-204ENST00000508321 RBBP6Q7Z6E9 1792 aaKnown RBP11.96□□□□□ -0.49
HTT-204ENST00000508321 ADGRA2Q96PE1 1338 aa11.95□□□□□ -0.5
HTT-204ENST00000508321 KLF18A0A0U1RQI7 1052 aa11.95□□□□□ -0.5
HTT-204ENST00000508321 GOLGA8BA8MQT2 603 aa11.95□□□□□ -0.5
HTT-204ENST00000508321 FLOT1O75955 427 aa11.95□□□□□ -0.5
HTT-204ENST00000508321 CPA1P15085 419 aa11.95□□□□□ -0.5
HTT-204ENST00000508321 SMARCA1P28370 1054 aa11.95□□□□□ -0.5
HTT-204ENST00000508321 TOB2Q14106 344 aaPredicted RBP11.95□□□□□ -0.5
HTT-204ENST00000508321 COG2Q14746 738 aa11.95□□□□□ -0.5
HTT-204ENST00000508321 NOM1Q5C9Z4 860 aaKnown RBP11.95□□□□□ -0.5
HTT-204ENST00000508321 KIAA1755Q5JYT7 1200 aa11.95□□□□□ -0.5
HTT-204ENST00000508321 BTNL9Q6UXG8 535 aa11.95□□□□□ -0.5
HTT-204ENST00000508321 MICU3Q86XE3 530 aa11.95□□□□□ -0.5
HTT-204ENST00000508321 PRPF38AQ8NAV1 312 aaKnown RBP11.95□□□□□ -0.5
HTT-204ENST00000508321 CHMP4CQ96CF2 233 aa11.95□□□□□ -0.5
HTT-204ENST00000508321 ZNF274Q96GC6 653 aaPredicted RBP11.95□□□□□ -0.5
HTT-204ENST00000508321 ASCC2Q9H1I8 757 aaPredicted RBP11.95□□□□□ -0.5
HTT-204ENST00000508321 ZFYVE28Q9HCC9 887 aa11.95□□□□□ -0.5
HTT-204ENST00000508321 HOXC10Q9NYD6 342 aa11.95□□□□□ -0.5
HTT-204ENST00000508321 ISY1Q9ULR0 285 aaKnown RBP11.95□□□□□ -0.5
HTT-204ENST00000508321 PALM3A6NDB9 673 aaPredicted RBP11.94□□□□□ -0.5
HTT-204ENST00000508321 SPDYE16A6NNV3 312 aaPredicted RBP11.94□□□□□ -0.5
HTT-204ENST00000508321 COPB2P35606 906 aa11.94□□□□□ -0.5
HTT-204ENST00000508321 METAP2P50579 478 aaKnown RBP eCLIP11.94□□□□□ -0.5
HTT-204ENST00000508321 OAZ1P54368 228 aa11.94□□□□□ -0.5
HTT-204ENST00000508321 AK2P54819 239 aa11.94□□□□□ -0.5
HTT-204ENST00000508321 HERVK_113P62684 666 aa11.94□□□□□ -0.5
HTT-204ENST00000508321 DGKZQ13574 1117 aa11.94□□□□□ -0.5
HTT-204ENST00000508321 COL9A3Q14050 684 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms