RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 DNAJA2O60884 412 aa6.61□□□□□ -1.35
CLOCK-207ENST00000508049 USP2O75604 605 aaPredicted RBP6.61□□□□□ -1.35
CLOCK-207ENST00000508049 GBP2P32456 591 aaPredicted RBP6.61□□□□□ -1.35
CLOCK-207ENST00000508049 SRSF3P84103 164 aaKnown RBP6.61□□□□□ -1.35
CLOCK-207ENST00000508049 USHBP1Q8N6Y0 703 aa6.61□□□□□ -1.35
CLOCK-207ENST00000508049 MARCH10Q8NA82 808 aaPredicted RBP6.61□□□□□ -1.35
CLOCK-207ENST00000508049 SYTL5Q8TDW5 730 aaPredicted RBP6.61□□□□□ -1.35
CLOCK-207ENST00000508049 TMEM74Q96NL1 305 aa6.61□□□□□ -1.35
CLOCK-207ENST00000508049 KCNC2Q96PR1 638 aa6.61□□□□□ -1.35
CLOCK-207ENST00000508049 FOXP3Q9BZS1 431 aa6.61□□□□□ -1.35
CLOCK-207ENST00000508049 A0A0G2JLL6 359 aaPredicted RBP6.6□□□□□ -1.35
CLOCK-207ENST00000508049 SSU72P8A0A1W2PR75 194 aa6.6□□□□□ -1.35
CLOCK-207ENST00000508049 FAM160A1Q05DH4 1040 aa6.6□□□□□ -1.35
CLOCK-207ENST00000508049 SNAP47Q5SQN1 464 aa6.6□□□□□ -1.35
CLOCK-207ENST00000508049 CEP128Q6ZU80 1094 aa6.6□□□□□ -1.35
CLOCK-207ENST00000508049 TMC4Q7Z404 712 aa6.6□□□□□ -1.35
CLOCK-207ENST00000508049 VWCEQ96DN2 955 aa6.6□□□□□ -1.35
CLOCK-207ENST00000508049 RHOVQ96L33 236 aa6.6□□□□□ -1.35
CLOCK-207ENST00000508049 HDAC8Q9BY41 377 aa6.6□□□□□ -1.35
CLOCK-207ENST00000508049 SIRT5Q9NXA8 310 aa6.6□□□□□ -1.35
CLOCK-207ENST00000508049 MBD1Q9UIS9 605 aaPredicted RBP6.6□□□□□ -1.35
CLOCK-207ENST00000508049 MINDY4BA8MYZ0 360 aa6.59□□□□□ -1.35
CLOCK-207ENST00000508049 RGS13O14921 159 aa6.59□□□□□ -1.35
CLOCK-207ENST00000508049 NRDCO43847 1150 aa6.59□□□□□ -1.35
CLOCK-207ENST00000508049 FOXD2O60548 495 aaPredicted RBP6.59□□□□□ -1.35
CLOCK-207ENST00000508049 TRIM13O60858 407 aa6.59□□□□□ -1.35
CLOCK-207ENST00000508049 EFEMP2O95967 443 aa6.59□□□□□ -1.35
CLOCK-207ENST00000508049 PI3P19957 117 aa6.59□□□□□ -1.35
CLOCK-207ENST00000508049 KIR2DL1P43626 348 aaPredicted RBP6.59□□□□□ -1.35
CLOCK-207ENST00000508049 KIR2DL2P43627 348 aaPredicted RBP6.59□□□□□ -1.35
CLOCK-207ENST00000508049 MLECQ14165 292 aa6.59□□□□□ -1.35
CLOCK-207ENST00000508049 REC114Q7Z4M0 266 aa6.59□□□□□ -1.35
CLOCK-207ENST00000508049 GOLM1Q8NBJ4 401 aa6.59□□□□□ -1.35
CLOCK-207ENST00000508049 DAGLBQ8NCG7 672 aa6.59□□□□□ -1.35
CLOCK-207ENST00000508049 PANK1Q8TE04 598 aa6.59□□□□□ -1.35
CLOCK-207ENST00000508049 TCTN2Q96GX1 697 aa6.59□□□□□ -1.35
CLOCK-207ENST00000508049 MAP6Q96JE9 813 aa6.59□□□□□ -1.35
CLOCK-207ENST00000508049 SIGLEC10Q96LC7 697 aa6.59□□□□□ -1.35
CLOCK-207ENST00000508049 IRAK3Q9Y616 596 aa6.59□□□□□ -1.35
CLOCK-207ENST00000508049 PCBP3P57721 371 aaKnown RBP6.58□□□□□ -1.36
CLOCK-207ENST00000508049 RNF4P78317 190 aa6.58□□□□□ -1.36
CLOCK-207ENST00000508049 PWP1Q13610 501 aa6.58□□□□□ -1.36
CLOCK-207ENST00000508049 MPP2Q14168 576 aa6.58□□□□□ -1.36
CLOCK-207ENST00000508049 ZNF655Q8N720 491 aaPredicted RBP6.58□□□□□ -1.36
CLOCK-207ENST00000508049 FBXO27Q8NI29 283 aa6.58□□□□□ -1.36
CLOCK-207ENST00000508049 RSRP1Q9BUV0 290 aa6.58□□□□□ -1.36
CLOCK-207ENST00000508049 CRTAC1Q9NQ79 661 aa6.58□□□□□ -1.36
CLOCK-207ENST00000508049 TCFL5Q9UL49 500 aa6.58□□□□□ -1.36
CLOCK-207ENST00000508049 HRKO00198 91 aa6.57□□□□□ -1.36
CLOCK-207ENST00000508049 TLR3O15455 904 aaKnown RBP6.57□□□□□ -1.36
CLOCK-207ENST00000508049 FKTNO75072 461 aa6.57□□□□□ -1.36
CLOCK-207ENST00000508049 RAG1P15918 1043 aa6.57□□□□□ -1.36
CLOCK-207ENST00000508049 SDHBP21912 280 aa6.57□□□□□ -1.36
CLOCK-207ENST00000508049 VIPR1P32241 457 aa6.57□□□□□ -1.36
CLOCK-207ENST00000508049 EPHB3P54753 998 aa6.57□□□□□ -1.36
CLOCK-207ENST00000508049 NFIXQ14938 502 aa6.57□□□□□ -1.36
CLOCK-207ENST00000508049 ARSHQ5FYA8 562 aa6.57□□□□□ -1.36
CLOCK-207ENST00000508049 TMC3Q7Z5M5 1100 aa6.57□□□□□ -1.36
CLOCK-207ENST00000508049 CRELD1Q96HD1 420 aa6.57□□□□□ -1.36
CLOCK-207ENST00000508049 TRAIPQ9BWF2 469 aa6.57□□□□□ -1.36
CLOCK-207ENST00000508049 TMEM82A0PJX8 343 aa6.56□□□□□ -1.36
CLOCK-207ENST00000508049 SLC22A31A6NKX4 558 aa6.56□□□□□ -1.36
CLOCK-207ENST00000508049 UBOX5O94941 541 aa6.56□□□□□ -1.36
CLOCK-207ENST00000508049 SYPP08247 313 aa6.56□□□□□ -1.36
CLOCK-207ENST00000508049 SYN1P17600 705 aa6.56□□□□□ -1.36
CLOCK-207ENST00000508049 AFF3P51826 1226 aaKnown RBP6.56□□□□□ -1.36
CLOCK-207ENST00000508049 ZPBP2Q6X784 338 aa6.56□□□□□ -1.36
CLOCK-207ENST00000508049 SND1Q7KZF4 910 aaKnown RBP eCLIP6.56□□□□□ -1.36
CLOCK-207ENST00000508049 LINC00116Q8NCU8 138 aa6.56□□□□□ -1.36
CLOCK-207ENST00000508049 HHIPL1Q96JK4 782 aa6.56□□□□□ -1.36
CLOCK-207ENST00000508049 CNTD2Q9H8S5 307 aa6.56□□□□□ -1.36
CLOCK-207ENST00000508049 N4BP3O15049 544 aa6.55□□□□□ -1.36
CLOCK-207ENST00000508049 SORBS3O60504 671 aa6.55□□□□□ -1.36
CLOCK-207ENST00000508049 SASH1O94885 1247 aa6.55□□□□□ -1.36
CLOCK-207ENST00000508049 PNLIPP16233 465 aa6.55□□□□□ -1.36
CLOCK-207ENST00000508049 RTP1P59025 263 aa6.55□□□□□ -1.36
CLOCK-207ENST00000508049 SNW1Q13573 536 aaKnown RBP6.55□□□□□ -1.36
CLOCK-207ENST00000508049 NBPF9Q3BBW0 867 aa6.55□□□□□ -1.36
CLOCK-207ENST00000508049 NBPF12Q5TAG4 269 aaPredicted RBP6.55□□□□□ -1.36
CLOCK-207ENST00000508049 FAM196AQ6ZSG2 479 aa6.55□□□□□ -1.36
CLOCK-207ENST00000508049 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.55□□□□□ -1.36
CLOCK-207ENST00000508049 MRS2Q9HD23 443 aa6.55□□□□□ -1.36
CLOCK-207ENST00000508049 VTI1BQ9UEU0 232 aa6.55□□□□□ -1.36
CLOCK-207ENST00000508049 PRAMEF1O95521 474 aa6.54□□□□□ -1.36
CLOCK-207ENST00000508049 CWF19L2Q2TBE0 894 aaKnown RBP6.54□□□□□ -1.36
CLOCK-207ENST00000508049 BBS9Q3SYG4 887 aa6.54□□□□□ -1.36
CLOCK-207ENST00000508049 OLFML2BQ68BL8 750 aa6.54□□□□□ -1.36
CLOCK-207ENST00000508049 DACT3Q96B18 629 aaPredicted RBP6.54□□□□□ -1.36
CLOCK-207ENST00000508049 PLCD4Q9BRC7 762 aa6.54□□□□□ -1.36
CLOCK-207ENST00000508049 XYLT2Q9H1B5 865 aa6.54□□□□□ -1.36
CLOCK-207ENST00000508049 PCDHB14Q9Y5E9 798 aa6.54□□□□□ -1.36
CLOCK-207ENST00000508049 ABLIM1O14639 778 aa6.53□□□□□ -1.36
CLOCK-207ENST00000508049 GARTP22102 1010 aa6.53□□□□□ -1.36
CLOCK-207ENST00000508049 POLR2BP30876 1174 aaKnown RBP6.53□□□□□ -1.36
CLOCK-207ENST00000508049 YBX1P67809 324 aaKnown RBP6.53□□□□□ -1.36
CLOCK-207ENST00000508049 VMACQ2NL98 169 aa6.53□□□□□ -1.36
CLOCK-207ENST00000508049 BRMS1Q9HCU9 246 aa6.53□□□□□ -1.36
CLOCK-207ENST00000508049 RTEL1Q9NZ71 1219 aa6.53□□□□□ -1.36
CLOCK-207ENST00000508049 GMIPQ9P107 970 aa6.53□□□□□ -1.36
CLOCK-207ENST00000508049 OTOL1A6NHN0 477 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms