RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 EDC3Q96F86 508 aaKnown RBP6.9□□□□□ -1.31
KDM3B-204ENST00000507996 JAKMIP1Q96N16 626 aaKnown RBP6.9□□□□□ -1.31
KDM3B-204ENST00000507996 SLC40A1Q9NP59 571 aa6.9□□□□□ -1.31
KDM3B-204ENST00000507996 CPSF2Q9P2I0 782 aaKnown RBP6.9□□□□□ -1.31
KDM3B-204ENST00000507996 CICQ96RK0 1608 aaPredicted RBP6.9□□□□□ -1.31
KDM3B-204ENST00000507996 PDLIM1O00151 329 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 PSMA5P28066 241 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 ADORA1P30542 326 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 STIM1Q13586 685 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 C6orf89Q6UWU4 347 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 CNTROBQ8N137 903 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 NLGN1Q8N2Q7 840 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 RUFY2Q8WXA3 655 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 CDC5LQ99459 802 aaKnown RBP6.89□□□□□ -1.31
KDM3B-204ENST00000507996 NAA15Q9BXJ9 866 aaKnown RBP6.89□□□□□ -1.31
KDM3B-204ENST00000507996 MYO6Q9UM54 1294 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 UBR3Q6ZT12 1888 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 CTAGE15A4D2H0 777 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 GOLGA6CA6NDK9 693 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 PPFIA2O75334 1257 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 GLRX3O76003 335 aaKnown RBP6.89□□□□□ -1.31
KDM3B-204ENST00000507996 GOLGA6DP0CG33 693 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 CTAGE8P0CG41 777 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 ARID4AP29374 1257 aaPredicted RBP6.89□□□□□ -1.31
KDM3B-204ENST00000507996 USP14P54578 494 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 NAP1L1P55209 391 aaKnown RBP6.89□□□□□ -1.31
KDM3B-204ENST00000507996 SETDB1Q15047 1291 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 ADCK5Q3MIX3 580 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 C1QTNF12Q5T7M4 302 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 TOGARAM2Q6ZUX3 1019 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 CTAGE6Q86UF2 777 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 MFN1Q8IWA4 741 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 CTAGE4Q8IX94 777 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 PARP9Q8IXQ6 854 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 TC2NQ8N9U0 490 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 FLAD1Q8NFF5 587 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 RPGRQ92834 1020 aaKnown RBP6.89□□□□□ -1.31
KDM3B-204ENST00000507996 SAAL1Q96ER3 474 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 PANX2Q96RD6 677 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 MMTAG2Q9BU76 263 aaKnown RBP6.89□□□□□ -1.31
KDM3B-204ENST00000507996 EBF2Q9HAK2 575 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 GOLGA6AQ9NYA3 693 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 RIPOR2Q9Y4F9 1068 aa6.89□□□□□ -1.31
KDM3B-204ENST00000507996 C4AP0C0L4 1744 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 BCORQ6W2J9 1755 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 PPFIA3O75145 1194 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 CIAO1O76071 339 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 CCDC175P0C221 793 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 TOP1P11387 765 aaKnown RBP6.88□□□□□ -1.31
KDM3B-204ENST00000507996 TM4SF1P30408 202 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 GCKP35557 465 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 AMPD2Q01433 879 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 FKBP4Q02790 459 aaKnown RBP eCLIP6.88□□□□□ -1.31
KDM3B-204ENST00000507996 APLFQ8IW19 511 aaPredicted RBP6.88□□□□□ -1.31
KDM3B-204ENST00000507996 RBM12BQ8IXT5 1001 aaKnown RBP6.88□□□□□ -1.31
KDM3B-204ENST00000507996 CCDC13Q8IYE1 715 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 NECAB1Q8N987 351 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 C1orf131Q8NDD1 294 aaKnown RBP6.88□□□□□ -1.31
KDM3B-204ENST00000507996 SMARCC2Q8TAQ2 1214 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 MRPS27Q92552 414 aaKnown RBP6.88□□□□□ -1.31
KDM3B-204ENST00000507996 RPGRIP1Q96KN7 1286 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 LLPHQ9BRT6 129 aaKnown RBP6.88□□□□□ -1.31
KDM3B-204ENST00000507996 TUBE1Q9UJT0 475 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 CORO1CQ9ULV4 474 aaPredicted RBP6.88□□□□□ -1.31
KDM3B-204ENST00000507996 ERICH2A1L162 156 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 WTIPA6NIX2 430 aaPredicted RBP6.88□□□□□ -1.31
KDM3B-204ENST00000507996 POLRMTO00411 1230 aaKnown RBP6.88□□□□□ -1.31
KDM3B-204ENST00000507996 BIN1O00499 593 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 GTPBP6O43824 516 aaPredicted RBP6.88□□□□□ -1.31
KDM3B-204ENST00000507996 PHACTR2O75167 634 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 RTN3O95197 1032 aaPredicted RBP6.88□□□□□ -1.31
KDM3B-204ENST00000507996 PDE8BO95263 885 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 IMPDH2P12268 514 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 RPS8P62241 208 aaKnown RBP6.88□□□□□ -1.31
KDM3B-204ENST00000507996 CHRNDQ07001 517 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 LAMA4Q16363 1823 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 TTC39AQ5SRH9 613 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 ADALQ6DHV7 355 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 CRELD2Q6UXH1 353 aaPredicted RBP6.88□□□□□ -1.31
KDM3B-204ENST00000507996 SLC51AQ86UW1 340 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 DDX60Q8IY21 1712 aaKnown RBP6.88□□□□□ -1.31
KDM3B-204ENST00000507996 LMBR1Q8WVP7 490 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 ZNF396Q96N95 335 aaPredicted RBP6.88□□□□□ -1.31
KDM3B-204ENST00000507996 MRPL44Q9H9J2 332 aaKnown RBP6.88□□□□□ -1.31
KDM3B-204ENST00000507996 KIF9Q9HAQ2 790 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 WWC3Q9ULE0 1092 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 TAF1P21675 1872 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 SCN7AQ01118 1682 aa6.88□□□□□ -1.31
KDM3B-204ENST00000507996 CTAGE9A4FU28 777 aa6.87□□□□□ -1.31
KDM3B-204ENST00000507996 MGRN1O60291 552 aa6.87□□□□□ -1.31
KDM3B-204ENST00000507996 CAND2O75155 1236 aa6.87□□□□□ -1.31
KDM3B-204ENST00000507996 SMNDC1O75940 238 aaKnown RBP eCLIP6.87□□□□□ -1.317e-6■■■■□ 20.7
KDM3B-204ENST00000507996 CPA1P15085 419 aa6.87□□□□□ -1.31
KDM3B-204ENST00000507996 GGCXP38435 758 aa6.87□□□□□ -1.31
KDM3B-204ENST00000507996 UBASH3AP57075 661 aa6.87□□□□□ -1.31
KDM3B-204ENST00000507996 GNGT1P63211 74 aa6.87□□□□□ -1.31
KDM3B-204ENST00000507996 TOB2Q14106 344 aaPredicted RBP6.87□□□□□ -1.31
KDM3B-204ENST00000507996 SF3B3Q15393 1217 aaKnown RBP6.87□□□□□ -1.31
KDM3B-204ENST00000507996 LACTB2Q53H82 288 aaPredicted RBP6.87□□□□□ -1.31
KDM3B-204ENST00000507996 SLC10A5Q5PT55 438 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms