RNA–Protein interactions for RNA: ENST00000507714.1

TRIO-209, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-209ENST00000507714 ASPRV1Q53RT3 343 aa10.5□□□□□ -0.73
TRIO-209ENST00000507714 MICU3Q86XE3 530 aa10.5□□□□□ -0.73
TRIO-209ENST00000507714 NKX2-3Q8TAU0 364 aa10.5□□□□□ -0.73
TRIO-209ENST00000507714 ACER1Q8TDN7 264 aa10.5□□□□□ -0.73
TRIO-209ENST00000507714 GMCL1Q96IK5 515 aa10.5□□□□□ -0.73
TRIO-209ENST00000507714 CLMNQ96JQ2 1002 aa10.5□□□□□ -0.73
TRIO-209ENST00000507714 BRPF3Q9ULD4 1205 aa10.5□□□□□ -0.73
TRIO-209ENST00000507714 TPCN1Q9ULQ1 816 aa10.5□□□□□ -0.73
TRIO-209ENST00000507714 MTMR7Q9Y216 660 aa10.5□□□□□ -0.73
TRIO-209ENST00000507714 AFG3L2Q9Y4W6 797 aa10.5□□□□□ -0.73
TRIO-209ENST00000507714 PHIPQ8WWQ0 1821 aa10.49□□□□□ -0.73
TRIO-209ENST00000507714 FAM155AB1AL88 458 aaPredicted RBP10.49□□□□□ -0.73
TRIO-209ENST00000507714 WDR46O15213 610 aaKnown RBP10.49□□□□□ -0.73
TRIO-209ENST00000507714 CETPP11597 493 aa10.49□□□□□ -0.73
TRIO-209ENST00000507714 BMP3P12645 472 aa10.49□□□□□ -0.73
TRIO-209ENST00000507714 AKAP17AQ02040 695 aaKnown RBP10.49□□□□□ -0.73
TRIO-209ENST00000507714 TROAPQ12815 778 aa10.49□□□□□ -0.73
TRIO-209ENST00000507714 IKQ13123 557 aaPredicted RBP10.49□□□□□ -0.73
TRIO-209ENST00000507714 STK3Q13188 491 aa10.49□□□□□ -0.73
TRIO-209ENST00000507714 MTMR2Q13614 643 aa10.49□□□□□ -0.73
TRIO-209ENST00000507714 SHROOM1Q2M3G4 852 aaPredicted RBP10.49□□□□□ -0.73
TRIO-209ENST00000507714 CLEC10AQ8IUN9 316 aa10.49□□□□□ -0.73
TRIO-209ENST00000507714 SIAH1Q8IUQ4 282 aa10.49□□□□□ -0.73
TRIO-209ENST00000507714 CHURC1Q8WUH1 139 aa10.49□□□□□ -0.73
TRIO-209ENST00000507714 TMX3Q96JJ7 454 aa10.49□□□□□ -0.73
TRIO-209ENST00000507714 LARP6Q9BRS8 491 aaKnown RBP10.49□□□□□ -0.73
TRIO-209ENST00000507714 WBP1LQ9NX94 342 aa10.49□□□□□ -0.73
TRIO-209ENST00000507714 KIF3AQ9Y496 699 aa10.49□□□□□ -0.73
TRIO-209ENST00000507714 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.49□□□□□ -0.73
TRIO-209ENST00000507714 A0A1W2PRG0 241 aa10.48□□□□□ -0.73
TRIO-209ENST00000507714 IRF6O14896 467 aa10.48□□□□□ -0.73
TRIO-209ENST00000507714 NDUFB10O96000 172 aa10.48□□□□□ -0.73
TRIO-209ENST00000507714 PDHBP11177 359 aa10.48□□□□□ -0.73
TRIO-209ENST00000507714 SMARCA1P28370 1054 aa10.48□□□□□ -0.73
TRIO-209ENST00000507714 HMGCS2P54868 508 aa10.48□□□□□ -0.73
TRIO-209ENST00000507714 CCT2P78371 535 aaKnown RBP10.48□□□□□ -0.73
TRIO-209ENST00000507714 ZNF543Q08ER8 600 aa10.48□□□□□ -0.73
TRIO-209ENST00000507714 TRAF1Q13077 416 aa10.48□□□□□ -0.73
TRIO-209ENST00000507714 COL9A3Q14050 684 aaPredicted RBP10.48□□□□□ -0.73
TRIO-209ENST00000507714 ZYXQ15942 572 aaKnown RBP10.48□□□□□ -0.73
TRIO-209ENST00000507714 ME3Q16798 604 aa10.48□□□□□ -0.73
TRIO-209ENST00000507714 SH3D19Q5HYK7 790 aa10.48□□□□□ -0.73
TRIO-209ENST00000507714 CCDC84Q86UT8 332 aaPredicted RBP10.48□□□□□ -0.73
TRIO-209ENST00000507714 FAM160B2Q86V87 743 aa10.48□□□□□ -0.73
TRIO-209ENST00000507714 TRIM22Q8IYM9 498 aa10.48□□□□□ -0.73
TRIO-209ENST00000507714 PROCA1Q8NCQ7 364 aaPredicted RBP10.48□□□□□ -0.73
TRIO-209ENST00000507714 GTF3C6Q969F1 213 aa10.48□□□□□ -0.73
TRIO-209ENST00000507714 C12orf42Q96LP6 360 aa10.48□□□□□ -0.73
TRIO-209ENST00000507714 LLPHQ9BRT6 129 aaKnown RBP10.48□□□□□ -0.73
TRIO-209ENST00000507714 SENP2Q9HC62 589 aa10.48□□□□□ -0.73
TRIO-209ENST00000507714 SAGE1Q9NXZ1 904 aa10.48□□□□□ -0.73
TRIO-209ENST00000507714 RBM27Q9P2N5 1060 aaKnown RBP10.48□□□□□ -0.73
TRIO-209ENST00000507714 FEM1BQ9UK73 627 aa10.48□□□□□ -0.73
TRIO-209ENST00000507714 KCNH4Q9UQ05 1017 aa10.48□□□□□ -0.73
TRIO-209ENST00000507714 CTDP1Q9Y5B0 961 aaPredicted RBP10.48□□□□□ -0.73
TRIO-209ENST00000507714 MYH6P13533 1939 aa10.48□□□□□ -0.73
TRIO-209ENST00000507714 BAZ2BQ9UIF8 2168 aaKnown RBP10.48□□□□□ -0.73
TRIO-209ENST00000507714 PTPRFP10586 1907 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 CCL15-CCL14A0A0B4J2E2 113 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 USP17L15C9J2P7 530 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 USP17L13C9JLJ4 530 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 USP17L11C9JVI0 530 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 KLRF2D3W0D1 207 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 USP17L18D6R9N7 530 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 USP17L22D6RA61 530 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 USP17L17D6RBQ6 530 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 USP17L19D6RCP7 530 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 USP17L20D6RJB6 530 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 SNHG28P0DPA3 235 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 FDX1P10109 184 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 USP17L24Q0WX57 530 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 CCL15Q16663 113 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 GADL1Q6ZQY3 521 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 CCDC144CPQ8IYA2 1237 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 SPICE1Q8N0Z3 855 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 WASF1Q92558 559 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 INTS4Q96HW7 963 aaKnown RBP10.47□□□□□ -0.73
TRIO-209ENST00000507714 MYL10Q9BUA6 226 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 TANGO6Q9C0B7 1094 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 GPCPD1Q9NPB8 672 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.47□□□□□ -0.73
TRIO-209ENST00000507714 PNMA2Q9UL42 364 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 THSD7BQ9C0I4 1608 aa10.47□□□□□ -0.73
TRIO-209ENST00000507714 A0A0G2JLL6 359 aaPredicted RBP10.46□□□□□ -0.73
TRIO-209ENST00000507714 PALM3A6NDB9 673 aaPredicted RBP10.46□□□□□ -0.73
TRIO-209ENST00000507714 TMEM232C9JQI7 657 aa10.46□□□□□ -0.73
TRIO-209ENST00000507714 PLA2G6O60733 806 aa10.46□□□□□ -0.73
TRIO-209ENST00000507714 TRPA1O75762 1119 aa10.46□□□□□ -0.73
TRIO-209ENST00000507714 RXRAP19793 462 aa10.46□□□□□ -0.73
TRIO-209ENST00000507714 OSBPP22059 807 aa10.46□□□□□ -0.73
TRIO-209ENST00000507714 TM4SF4P48230 202 aa10.46□□□□□ -0.73
TRIO-209ENST00000507714 STAT2P52630 851 aa10.46□□□□□ -0.73
TRIO-209ENST00000507714 HMGN5P82970 282 aaKnown RBP10.46□□□□□ -0.73
TRIO-209ENST00000507714 SSRP1Q08945 709 aaKnown RBP10.46□□□□□ -0.73
TRIO-209ENST00000507714 SCRN1Q12765 414 aa10.46□□□□□ -0.73
TRIO-209ENST00000507714 FAM83BQ5T0W9 1011 aa10.46□□□□□ -0.73
TRIO-209ENST00000507714 PRRT2Q7Z6L0 340 aaPredicted RBP10.46□□□□□ -0.73
TRIO-209ENST00000507714 RAB11FIP4Q86YS3 637 aa10.46□□□□□ -0.73
TRIO-209ENST00000507714 CCDC83Q8IWF9 413 aa10.46□□□□□ -0.73
TRIO-209ENST00000507714 NECAB1Q8N987 351 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms