RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 ADAMTS4O75173 837 aa16.92■□□□□ 0.3
DDR1-260ENST00000507533 FLOT1O75955 427 aa16.92■□□□□ 0.3
DDR1-260ENST00000507533 ZNF865P0CJ78 1059 aaPredicted RBP16.92■□□□□ 0.3
DDR1-260ENST00000507533 RAB30Q15771 203 aa16.92■□□□□ 0.3
DDR1-260ENST00000507533 TNNI3KQ59H18 835 aa16.92■□□□□ 0.3
DDR1-260ENST00000507533 KIAA1755Q5JYT7 1200 aa16.92■□□□□ 0.3
DDR1-260ENST00000507533 SAMD1Q6SPF0 538 aaPredicted RBP16.92■□□□□ 0.3
DDR1-260ENST00000507533 ZNF365Q70YC5 407 aa16.92■□□□□ 0.3
DDR1-260ENST00000507533 GPR108Q9NPR9 543 aa16.92■□□□□ 0.3
DDR1-260ENST00000507533 CXXC1Q9P0U4 656 aaPredicted RBP16.92■□□□□ 0.3
DDR1-260ENST00000507533 FPGT-TNNI3KV9GXZ4 949 aa16.92■□□□□ 0.3
DDR1-260ENST00000507533 PNMA6EA0A0J9YXQ4 647 aa16.91■□□□□ 0.3
DDR1-260ENST00000507533 IDH1O75874 414 aaKnown RBP16.91■□□□□ 0.3
DDR1-260ENST00000507533 SLC25A27O95847 323 aa16.91■□□□□ 0.3
DDR1-260ENST00000507533 ACRP10323 421 aa16.91■□□□□ 0.3
DDR1-260ENST00000507533 BMP1P13497 986 aa16.91■□□□□ 0.3
DDR1-260ENST00000507533 CSF2RAP15509 400 aa16.91■□□□□ 0.3
DDR1-260ENST00000507533 TMEM199Q8N511 208 aa16.91■□□□□ 0.3
DDR1-260ENST00000507533 CDCA7LQ96GN5 454 aa16.91■□□□□ 0.3
DDR1-260ENST00000507533 ZNF512BQ96KM6 892 aaPredicted RBP16.91■□□□□ 0.3
DDR1-260ENST00000507533 ROBO3Q96MS0 1386 aa16.9■□□□□ 0.3
DDR1-260ENST00000507533 MOXD2PA6NHM9 499 aa16.9■□□□□ 0.3
DDR1-260ENST00000507533 POLR3DP05423 398 aaPredicted RBP16.9■□□□□ 0.3
DDR1-260ENST00000507533 TMEM132BQ14DG7 1078 aa16.9■□□□□ 0.3
DDR1-260ENST00000507533 KCNA10Q16322 511 aa16.9■□□□□ 0.3
DDR1-260ENST00000507533 ZNF792Q3KQV3 632 aa16.9■□□□□ 0.3
DDR1-260ENST00000507533 PSRC1Q6PGN9 363 aaPredicted RBP16.9■□□□□ 0.3
DDR1-260ENST00000507533 MIER1Q8N108 512 aa16.9■□□□□ 0.3
DDR1-260ENST00000507533 MAGEB6Q8N7X4 407 aa16.9■□□□□ 0.3
DDR1-260ENST00000507533 KLHDC9Q8NEP7 349 aa16.9■□□□□ 0.3
DDR1-260ENST00000507533 NKX2-4Q9H2Z4 354 aa16.9■□□□□ 0.3
DDR1-260ENST00000507533 CNPY2Q9Y2B0 182 aa16.9■□□□□ 0.3
DDR1-260ENST00000507533 DIS3Q9Y2L1 958 aaKnown RBP16.9■□□□□ 0.3
DDR1-260ENST00000507533 ARIH1Q9Y4X5 557 aaPredicted RBP16.9■□□□□ 0.3
DDR1-260ENST00000507533 MROH7Q68CQ1 1323 aa16.9■□□□□ 0.3
DDR1-260ENST00000507533 SYNRGQ9UMZ2 1314 aa16.9■□□□□ 0.3
DDR1-260ENST00000507533 GNAI2P04899 355 aa16.89■□□□□ 0.29
DDR1-260ENST00000507533 CDK7P50613 346 aa16.89■□□□□ 0.29
DDR1-260ENST00000507533 GABPAQ06546 454 aa16.89■□□□□ 0.29
DDR1-260ENST00000507533 KCTD2Q14681 263 aa16.89■□□□□ 0.29
DDR1-260ENST00000507533 SPICE1Q8N0Z3 855 aa16.89■□□□□ 0.29
DDR1-260ENST00000507533 GLT1D1Q96MS3 346 aa16.89■□□□□ 0.29
DDR1-260ENST00000507533 SLC28A3Q9HAS3 691 aa16.89■□□□□ 0.29
DDR1-260ENST00000507533 HCN4Q9Y3Q4 1203 aa16.89■□□□□ 0.29
DDR1-260ENST00000507533 SYNGAP1Q96PV0 1343 aa16.89■□□□□ 0.29
DDR1-260ENST00000507533 APBB1O00213 710 aa16.88■□□□□ 0.29
DDR1-260ENST00000507533 TFF2Q03403 129 aa16.88■□□□□ 0.29
DDR1-260ENST00000507533 CCSAPQ6IQ19 270 aaPredicted RBP16.88■□□□□ 0.29
DDR1-260ENST00000507533 MICALL1Q8N3F8 863 aa16.88■□□□□ 0.29
DDR1-260ENST00000507533 VTI1AQ96AJ9 217 aa16.88■□□□□ 0.29
DDR1-260ENST00000507533 LRFN3Q9BTN0 628 aa16.88■□□□□ 0.29
DDR1-260ENST00000507533 PPP1R12CQ9BZL4 782 aa16.88■□□□□ 0.29
DDR1-260ENST00000507533 FAM184BQ9ULE4 1060 aa16.88■□□□□ 0.29
DDR1-260ENST00000507533 ELP1O95163 1332 aa16.88■□□□□ 0.29
DDR1-260ENST00000507533 MYH1P12882 1939 aa16.88■□□□□ 0.29
DDR1-260ENST00000507533 XIRP2A4UGR9 3374 aa16.88■□□□□ 0.29
DDR1-260ENST00000507533 A0A0G2JMZ2 1700 aa16.87■□□□□ 0.29
DDR1-260ENST00000507533 EVX2Q03828 476 aa16.87■□□□□ 0.29
DDR1-260ENST00000507533 OS9Q13438 667 aaPredicted RBP16.87■□□□□ 0.29
DDR1-260ENST00000507533 AAK1Q2M2I8 961 aa16.87■□□□□ 0.29
DDR1-260ENST00000507533 TMEM179Q6ZVK1 233 aa16.87■□□□□ 0.29
DDR1-260ENST00000507533 RIOX2Q8IUF8 465 aa16.87■□□□□ 0.29
DDR1-260ENST00000507533 HERVK_113Q902F9 699 aa16.87■□□□□ 0.29
DDR1-260ENST00000507533 IL23AQ9NPF7 189 aa16.87■□□□□ 0.29
DDR1-260ENST00000507533 YBX2Q9Y2T7 364 aaKnown RBP16.87■□□□□ 0.29
DDR1-260ENST00000507533 SMCHD1A6NHR9 2005 aa16.87■□□□□ 0.29
DDR1-260ENST00000507533 NCOR1O75376 2440 aa16.87■□□□□ 0.29
DDR1-260ENST00000507533 PLXNA1Q9UIW2 1896 aa16.86■□□□□ 0.29
DDR1-260ENST00000507533 MYADML2A6NDP7 307 aa16.86■□□□□ 0.29
DDR1-260ENST00000507533 CT47B1P0C2W7 299 aaPredicted RBP16.86■□□□□ 0.29
DDR1-260ENST00000507533 MTIF3Q9H2K0 278 aaKnown RBP16.86■□□□□ 0.29
DDR1-260ENST00000507533 EPHX3Q9H6B9 360 aa16.86■□□□□ 0.29
DDR1-260ENST00000507533 VCPKMTQ9H867 229 aa16.86■□□□□ 0.29
DDR1-260ENST00000507533 ARHGEF10LQ9HCE6 1279 aa16.86■□□□□ 0.29
DDR1-260ENST00000507533 TMX2Q9Y320 296 aa16.86■□□□□ 0.29
DDR1-260ENST00000507533 A0A0U1RQG5 324 aaPredicted RBP16.85■□□□□ 0.29
DDR1-260ENST00000507533 ARVCFO00192 962 aa16.85■□□□□ 0.29
DDR1-260ENST00000507533 WDR46O15213 610 aaKnown RBP16.85■□□□□ 0.29
DDR1-260ENST00000507533 TLR3O15455 904 aaKnown RBP16.85■□□□□ 0.29
DDR1-260ENST00000507533 DUSP11O75319 330 aaKnown RBP16.85■□□□□ 0.29
DDR1-260ENST00000507533 FGBP02675 491 aa16.85■□□□□ 0.29
DDR1-260ENST00000507533 ASGR1P07306 291 aa16.85■□□□□ 0.29
DDR1-260ENST00000507533 CYP2C18P33260 490 aa16.85■□□□□ 0.29
DDR1-260ENST00000507533 STAT3P40763 770 aa16.85■□□□□ 0.29
DDR1-260ENST00000507533 KCNQ1P51787 676 aa16.85■□□□□ 0.29
DDR1-260ENST00000507533 IRX5P78411 483 aaPredicted RBP16.85■□□□□ 0.29
DDR1-260ENST00000507533 SIAH1Q8IUQ4 282 aa16.85■□□□□ 0.29
DDR1-260ENST00000507533 ARHGAP45Q92619 1136 aa16.85■□□□□ 0.29
DDR1-260ENST00000507533 RIOK1Q9BRS2 568 aaKnown RBP16.85■□□□□ 0.29
DDR1-260ENST00000507533 SH2D4AQ9H788 454 aa16.85■□□□□ 0.29
DDR1-260ENST00000507533 MCM9Q9NXL9 1143 aa16.85■□□□□ 0.29
DDR1-260ENST00000507533 DBNLQ9UJU6 430 aaKnown RBP16.85■□□□□ 0.29
DDR1-260ENST00000507533 ZHX1Q9UKY1 873 aaPredicted RBP16.85■□□□□ 0.29
DDR1-260ENST00000507533 ADAMTS5Q9UNA0 930 aa16.85■□□□□ 0.29
DDR1-260ENST00000507533 CHD7Q9P2D1 2997 aa16.85■□□□□ 0.29
DDR1-260ENST00000507533 SNAI1O95863 264 aaPredicted RBP16.84■□□□□ 0.29
DDR1-260ENST00000507533 C6orf222P0C671 652 aaPredicted RBP16.84■□□□□ 0.29
DDR1-260ENST00000507533 CST5P28325 142 aaPredicted RBP16.84■□□□□ 0.29
DDR1-260ENST00000507533 SKIV2LQ15477 1246 aaKnown RBP16.84■□□□□ 0.29
DDR1-260ENST00000507533 CLEC10AQ8IUN9 316 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms