RNA–Protein interactions for RNA: ENST00000507197.5

SNHG4-204, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 2 BASIC

Gene SNHG4, Length 865 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-204ENST00000507197 KCTD2Q14681 263 aa15.38■□□□□ 0.05
SNHG4-204ENST00000507197 TMEM132BQ14DG7 1078 aa15.38■□□□□ 0.05
SNHG4-204ENST00000507197 RIOX2Q8IUF8 465 aa15.38■□□□□ 0.05
SNHG4-204ENST00000507197 TRPV1Q8NER1 839 aa15.38■□□□□ 0.05
SNHG4-204ENST00000507197 STRBPQ96SI9 672 aaKnown RBP15.38■□□□□ 0.05
SNHG4-204ENST00000507197 ADAMTS5Q9UNA0 930 aa15.38■□□□□ 0.05
SNHG4-204ENST00000507197 LAMA3Q16787 3333 aa15.38■□□□□ 0.05
SNHG4-204ENST00000507197 STAT3P40763 770 aa15.37■□□□□ 0.05
SNHG4-204ENST00000507197 APPBP2Q92624 585 aa15.37■□□□□ 0.05
SNHG4-204ENST00000507197 MAML3Q96JK9 1138 aa15.37■□□□□ 0.05
SNHG4-204ENST00000507197 MMP19Q99542 508 aa15.37■□□□□ 0.05
SNHG4-204ENST00000507197 DCTPP1Q9H773 170 aa15.37■□□□□ 0.05
SNHG4-204ENST00000507197 PPP1R9AQ9ULJ8 1098 aa15.37■□□□□ 0.05
SNHG4-204ENST00000507197 DIS3Q9Y2L1 958 aaKnown RBP15.37■□□□□ 0.05
SNHG4-204ENST00000507197 A0A0G2JMZ2 1700 aa15.37■□□□□ 0.05
SNHG4-204ENST00000507197 VWA5AO00534 786 aa15.36■□□□□ 0.05
SNHG4-204ENST00000507197 ATN1P54259 1190 aaPredicted RBP15.36■□□□□ 0.05
SNHG4-204ENST00000507197 MDM2Q00987 491 aaPredicted RBP15.36■□□□□ 0.05
SNHG4-204ENST00000507197 GJC2Q5T442 439 aaPredicted RBP15.36■□□□□ 0.05
SNHG4-204ENST00000507197 C20orf194Q5TEA3 1177 aa15.36■□□□□ 0.05
SNHG4-204ENST00000507197 DEFB123Q8N688 67 aa15.36■□□□□ 0.05
SNHG4-204ENST00000507197 NYAP2Q9P242 653 aa15.36■□□□□ 0.05
SNHG4-204ENST00000507197 GSG1L2A8MUP6 293 aa15.35■□□□□ 0.05
SNHG4-204ENST00000507197 MINDY4BA8MYZ0 360 aa15.35■□□□□ 0.05
SNHG4-204ENST00000507197 ERC2O15083 957 aa15.35■□□□□ 0.05
SNHG4-204ENST00000507197 RNF113AO15541 343 aaKnown RBP15.35■□□□□ 0.05
SNHG4-204ENST00000507197 CHGBP05060 677 aa15.35■□□□□ 0.05
SNHG4-204ENST00000507197 RTP1P59025 263 aa15.35■□□□□ 0.05
SNHG4-204ENST00000507197 FAM83BQ5T0W9 1011 aa15.35■□□□□ 0.05
SNHG4-204ENST00000507197 ZNF444Q8N0Y2 327 aaPredicted RBP15.35■□□□□ 0.05
SNHG4-204ENST00000507197 NACAP1Q9BZK3 213 aa15.35■□□□□ 0.05
SNHG4-204ENST00000507197 CTDP1Q9Y5B0 961 aaPredicted RBP15.35■□□□□ 0.05
SNHG4-204ENST00000507197 ROBO3Q96MS0 1386 aa15.35■□□□□ 0.05
SNHG4-204ENST00000507197 SMIM22K7EJ46 135 aa15.34■□□□□ 0.05
SNHG4-204ENST00000507197 MYCNP04198 464 aaPredicted RBP15.34■□□□□ 0.05
SNHG4-204ENST00000507197 APPP05067 770 aa15.34■□□□□ 0.05
SNHG4-204ENST00000507197 RARBP10826 455 aa15.34■□□□□ 0.05
SNHG4-204ENST00000507197 RASA1P20936 1047 aa15.34■□□□□ 0.05
SNHG4-204ENST00000507197 TDO2P48775 406 aa15.34■□□□□ 0.05
SNHG4-204ENST00000507197 SLC39A5Q6ZMH5 540 aa15.34■□□□□ 0.05
SNHG4-204ENST00000507197 MSL3Q8N5Y2 521 aaKnown RBP15.34■□□□□ 0.05
SNHG4-204ENST00000507197 PRPF38AQ8NAV1 312 aaKnown RBP15.34■□□□□ 0.05
SNHG4-204ENST00000507197 SLC17A8Q8NDX2 589 aa15.34■□□□□ 0.05
SNHG4-204ENST00000507197 OSBP2Q969R2 916 aa15.34■□□□□ 0.05
SNHG4-204ENST00000507197 SLF1Q9BQI6 1058 aa15.34■□□□□ 0.05
SNHG4-204ENST00000507197 TINF2Q9BSI4 451 aa15.34■□□□□ 0.05
SNHG4-204ENST00000507197 TEX13BQ9BXU2 312 aa15.34■□□□□ 0.05
SNHG4-204ENST00000507197 FBXO28Q9NVF7 368 aa15.34■□□□□ 0.05
SNHG4-204ENST00000507197 ZNF214Q9UL59 606 aaPredicted RBP15.34■□□□□ 0.05
SNHG4-204ENST00000507197 SYNPO2Q9UMS6 1093 aa15.34■□□□□ 0.05
SNHG4-204ENST00000507197 ATP11BQ9Y2G3 1177 aa15.34■□□□□ 0.05
SNHG4-204ENST00000507197 MYH8P13535 1937 aa15.34■□□□□ 0.05
SNHG4-204ENST00000507197 TTC41PQ6P2S7 1318 aa15.34■□□□□ 0.05
SNHG4-204ENST00000507197 F5H6K3 240 aa15.33■□□□□ 0.04
SNHG4-204ENST00000507197 GPAA1O43292 621 aa15.33■□□□□ 0.04
SNHG4-204ENST00000507197 SLC3A2P08195 630 aaKnown RBP15.33■□□□□ 0.04
SNHG4-204ENST00000507197 KLRC3Q07444 240 aa15.33■□□□□ 0.04
SNHG4-204ENST00000507197 PRAMEF19Q5SWL8 479 aa15.33■□□□□ 0.04
SNHG4-204ENST00000507197 C1orf53Q5VUE5 145 aa15.33■□□□□ 0.04
SNHG4-204ENST00000507197 ANO1Q5XXA6 986 aa15.33■□□□□ 0.04
SNHG4-204ENST00000507197 RNF180Q86T96 592 aa15.33■□□□□ 0.04
SNHG4-204ENST00000507197 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.33■□□□□ 0.04
SNHG4-204ENST00000507197 CNPY2Q9Y2B0 182 aa15.33■□□□□ 0.04
SNHG4-204ENST00000507197 RLFQ13129 1914 aa15.33■□□□□ 0.04
SNHG4-204ENST00000507197 BAZ2AQ9UIF9 1905 aaKnown RBP15.33■□□□□ 0.04
SNHG4-204ENST00000507197 FRMPD3Q5JV73 1810 aa15.32■□□□□ 0.04
SNHG4-204ENST00000507197 ZBED4O75132 1171 aa15.32■□□□□ 0.04
SNHG4-204ENST00000507197 PGK2P07205 417 aa15.32■□□□□ 0.04
SNHG4-204ENST00000507197 AKR1A1P14550 325 aa15.32■□□□□ 0.04
SNHG4-204ENST00000507197 PDE4BQ07343 736 aa15.32■□□□□ 0.04
SNHG4-204ENST00000507197 SNX17Q15036 470 aa15.32■□□□□ 0.04
SNHG4-204ENST00000507197 LRRC41Q15345 812 aa15.32■□□□□ 0.04
SNHG4-204ENST00000507197 ZNF792Q3KQV3 632 aa15.32■□□□□ 0.04
SNHG4-204ENST00000507197 PPP4R3BQ5MIZ7 849 aa15.32■□□□□ 0.04
SNHG4-204ENST00000507197 SNRNP48Q6IEG0 339 aaKnown RBP15.32■□□□□ 0.04
SNHG4-204ENST00000507197 REPS2Q8NFH8 660 aa15.32■□□□□ 0.04
SNHG4-204ENST00000507197 DDX11Q96FC9 970 aa15.32■□□□□ 0.04
SNHG4-204ENST00000507197 XPNPEP3Q9NQH7 507 aa15.32■□□□□ 0.04
SNHG4-204ENST00000507197 MYH7P12883 1935 aa15.31■□□□□ 0.04
SNHG4-204ENST00000507197 PATL2C9JE40 543 aaKnown RBP15.31■□□□□ 0.04
SNHG4-204ENST00000507197 ATP2A1O14983 1001 aa15.31■□□□□ 0.04
SNHG4-204ENST00000507197 NDUFB10O96000 172 aa15.31■□□□□ 0.04
SNHG4-204ENST00000507197 ADCYAP1R1P41586 468 aa15.31■□□□□ 0.04
SNHG4-204ENST00000507197 FAM47AQ5JRC9 791 aa15.31■□□□□ 0.04
SNHG4-204ENST00000507197 STK11IPQ8N1F8 1099 aa15.31■□□□□ 0.04
SNHG4-204ENST00000507197 PRDM5Q9NQX1 630 aaPredicted RBP15.31■□□□□ 0.04
SNHG4-204ENST00000507197 CLIP2Q9UDT6 1046 aa15.31■□□□□ 0.04
SNHG4-204ENST00000507197 ZBTB47Q9UFB7 747 aaPredicted RBP15.31■□□□□ 0.04
SNHG4-204ENST00000507197 FBXO40Q9UH90 709 aa15.31■□□□□ 0.04
SNHG4-204ENST00000507197 STXBP5LQ9Y2K9 1186 aa15.31■□□□□ 0.04
SNHG4-204ENST00000507197 TTLL1O95922 423 aa15.3■□□□□ 0.04
SNHG4-204ENST00000507197 FDX1P10109 184 aa15.3■□□□□ 0.04
SNHG4-204ENST00000507197 FAM109BQ6ICB4 259 aaPredicted RBP15.3■□□□□ 0.04
SNHG4-204ENST00000507197 IFNL3Q8IZI9 196 aa15.3■□□□□ 0.04
SNHG4-204ENST00000507197 MKL1Q969V6 931 aa15.3■□□□□ 0.04
SNHG4-204ENST00000507197 SYNGAP1Q96PV0 1343 aa15.3■□□□□ 0.04
SNHG4-204ENST00000507197 NUP88Q99567 741 aaPredicted RBP15.3■□□□□ 0.04
SNHG4-204ENST00000507197 MTMR10Q9NXD2 777 aa15.3■□□□□ 0.04
SNHG4-204ENST00000507197 MTMR4Q9NYA4 1195 aa15.3■□□□□ 0.04
SNHG4-204ENST00000507197 FEM1BQ9UK73 627 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms