RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 LDHCP07864 332 aa8.96□□□□□ -0.98
VCAN-207ENST00000507162 AKR1A1P14550 325 aa8.96□□□□□ -0.98
VCAN-207ENST00000507162 MECOMQ03112 1051 aa8.96□□□□□ -0.98
VCAN-207ENST00000507162 PTCRAQ6ISU1 281 aaPredicted RBP8.96□□□□□ -0.98
VCAN-207ENST00000507162 POTEBQ6S5H4 581 aa8.96□□□□□ -0.98
VCAN-207ENST00000507162 ERICH6Q7L0X2 663 aa8.96□□□□□ -0.98
VCAN-207ENST00000507162 TEX11Q8IYF3 940 aa8.96□□□□□ -0.98
VCAN-207ENST00000507162 RPUSD2Q8IZ73 545 aaKnown RBP8.96□□□□□ -0.98
VCAN-207ENST00000507162 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.96□□□□□ -0.98
VCAN-207ENST00000507162 HIPK3Q9H422 1215 aa8.96□□□□□ -0.98
VCAN-207ENST00000507162 UBE2ZQ9H832 354 aaPredicted RBP8.96□□□□□ -0.98
VCAN-207ENST00000507162 FAM86C1Q9NVL1 165 aa8.96□□□□□ -0.98
VCAN-207ENST00000507162 ZBTB21Q9ULJ3 1066 aa8.96□□□□□ -0.98
VCAN-207ENST00000507162 UMODL1Q5DID0 1318 aa8.96□□□□□ -0.98
VCAN-207ENST00000507162 FAM186AA6NE01 2351 aa8.95□□□□□ -0.98
VCAN-207ENST00000507162 A0A0U1RQG5 324 aaPredicted RBP8.95□□□□□ -0.98
VCAN-207ENST00000507162 EYA2O00167 538 aa8.95□□□□□ -0.98
VCAN-207ENST00000507162 SEMA3EO15041 775 aa8.95□□□□□ -0.98
VCAN-207ENST00000507162 ADAMTS4O75173 837 aa8.95□□□□□ -0.98
VCAN-207ENST00000507162 ALDH1L1O75891 902 aa8.95□□□□□ -0.98
VCAN-207ENST00000507162 GH2P01242 217 aa8.95□□□□□ -0.98
VCAN-207ENST00000507162 FCER1AP12319 257 aa8.95□□□□□ -0.98
VCAN-207ENST00000507162 VCAM1P19320 739 aa8.95□□□□□ -0.98
VCAN-207ENST00000507162 IRX5P78411 483 aaPredicted RBP8.95□□□□□ -0.98
VCAN-207ENST00000507162 ATP2B3Q16720 1220 aa8.95□□□□□ -0.98
VCAN-207ENST00000507162 LEXMQ3ZCV2 418 aa8.95□□□□□ -0.98
VCAN-207ENST00000507162 FOXP4Q8IVH2 680 aaPredicted RBP8.95□□□□□ -0.98
VCAN-207ENST00000507162 ANKRD44Q8N8A2 993 aa8.95□□□□□ -0.98
VCAN-207ENST00000507162 SRCIN1Q9C0H9 1055 aa8.95□□□□□ -0.98
VCAN-207ENST00000507162 SPATC1LQ9H0A9 340 aa8.95□□□□□ -0.98
VCAN-207ENST00000507162 RPAP3Q9H6T3 665 aaPredicted RBP8.95□□□□□ -0.98
VCAN-207ENST00000507162 HOXC10Q9NYD6 342 aa8.95□□□□□ -0.98
VCAN-207ENST00000507162 CEP126Q9P2H0 1117 aa8.95□□□□□ -0.98
VCAN-207ENST00000507162 ELP1O95163 1332 aa8.95□□□□□ -0.98
VCAN-207ENST00000507162 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.94□□□□□ -0.98
VCAN-207ENST00000507162 MYADML2A6NDP7 307 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 KIF28PB7ZC32 967 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 ARHGEF15O94989 841 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 PGK2P07205 417 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 ASGR1P07306 291 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 C6orf222P0C671 652 aaPredicted RBP8.94□□□□□ -0.98
VCAN-207ENST00000507162 ZNF865P0CJ78 1059 aaPredicted RBP8.94□□□□□ -0.98
VCAN-207ENST00000507162 CLCN6P51797 869 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 USP14P54578 494 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 TAP1Q03518 808 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 TTLL4Q14679 1199 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 RAB3GAP1Q15042 981 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 RALBP1Q15311 655 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 RABL6Q3YEC7 729 aaPredicted RBP8.94□□□□□ -0.98
VCAN-207ENST00000507162 LBX2Q6XYB7 198 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 EP400NLQ6ZTU2 488 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 ERMP1Q7Z2K6 904 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 FAM126BQ8IXS8 530 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 KLHDC9Q8NEP7 349 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 ACER1Q8TDN7 264 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 SH3RF3Q8TEJ3 882 aaPredicted RBP8.94□□□□□ -0.98
VCAN-207ENST00000507162 DCBLD2Q96PD2 775 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 TINF2Q9BSI4 451 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 DHX36Q9H2U1 1008 aaKnown RBP8.94□□□□□ -0.98
VCAN-207ENST00000507162 GINM1Q9NU53 330 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 NRBP1Q9UHY1 535 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 FAM184BQ9ULE4 1060 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 CNPY2Q9Y2B0 182 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 ZNF536O15090 1300 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 SYNRGQ9UMZ2 1314 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 GBF1Q92538 1859 aa8.94□□□□□ -0.98
VCAN-207ENST00000507162 GRXCR2A6NFK2 248 aa8.93□□□□□ -0.98
VCAN-207ENST00000507162 LPXNO60711 386 aa8.93□□□□□ -0.98
VCAN-207ENST00000507162 MAP4K4O95819 1239 aaPredicted RBP8.93□□□□□ -0.98
VCAN-207ENST00000507162 ADORA1P30542 326 aa8.93□□□□□ -0.98
VCAN-207ENST00000507162 GSTO1P78417 241 aa8.93□□□□□ -0.98
VCAN-207ENST00000507162 COG2Q14746 738 aa8.93□□□□□ -0.98
VCAN-207ENST00000507162 GNASQ5JWF2 1037 aa8.93□□□□□ -0.98
VCAN-207ENST00000507162 CCDC102BQ68D86 513 aa8.93□□□□□ -0.98
VCAN-207ENST00000507162 CCSAPQ6IQ19 270 aaPredicted RBP8.93□□□□□ -0.98
VCAN-207ENST00000507162 DEFB128Q7Z7B8 93 aa8.93□□□□□ -0.98
VCAN-207ENST00000507162 MAPKAPK5Q8IW41 473 aa8.93□□□□□ -0.98
VCAN-207ENST00000507162 PCSK9Q8NBP7 692 aaKnown RBP8.93□□□□□ -0.98
VCAN-207ENST00000507162 SHCBP1Q8NEM2 672 aa8.93□□□□□ -0.98
VCAN-207ENST00000507162 TGFBRAP1Q8WUH2 860 aa8.93□□□□□ -0.98
VCAN-207ENST00000507162 ATOH1Q92858 354 aaPredicted RBP8.93□□□□□ -0.98
VCAN-207ENST00000507162 SCLYQ96I15 445 aa8.93□□□□□ -0.98
VCAN-207ENST00000507162 C12orf42Q96LP6 360 aa8.93□□□□□ -0.98
VCAN-207ENST00000507162 NOL10Q9BSC4 688 aaKnown RBP8.93□□□□□ -0.98
VCAN-207ENST00000507162 UPF3BQ9BZI7 483 aaKnown RBP8.93□□□□□ -0.98
VCAN-207ENST00000507162 SIL1Q9H173 461 aa8.93□□□□□ -0.98
VCAN-207ENST00000507162 MROH8Q9H579 483 aa8.93□□□□□ -0.98
VCAN-207ENST00000507162 DNAJC18Q9H819 358 aa8.93□□□□□ -0.98
VCAN-207ENST00000507162 SPC25Q9HBM1 224 aa8.93□□□□□ -0.98
VCAN-207ENST00000507162 RAI14Q9P0K7 980 aa8.93□□□□□ -0.98
VCAN-207ENST00000507162 SAP30BPQ9UHR5 308 aaKnown RBP8.93□□□□□ -0.98
VCAN-207ENST00000507162 PALD1Q9ULE6 856 aa8.93□□□□□ -0.98
VCAN-207ENST00000507162 ATAD5Q96QE3 1844 aa8.92□□□□□ -0.98
VCAN-207ENST00000507162 H3BQ06 376 aaPredicted RBP8.92□□□□□ -0.98
VCAN-207ENST00000507162 CD44P16070 742 aaKnown RBP8.92□□□□□ -0.98
VCAN-207ENST00000507162 TCF15Q12870 199 aa8.92□□□□□ -0.98
VCAN-207ENST00000507162 RASGRF1Q13972 1273 aa8.92□□□□□ -0.98
VCAN-207ENST00000507162 CCDC27Q2M243 656 aa8.92□□□□□ -0.98
VCAN-207ENST00000507162 TBC1D9Q6ZT07 1266 aa8.92□□□□□ -0.98
VCAN-207ENST00000507162 SPRED2Q7Z698 418 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms