RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 CYP46A1Q9Y6A2 500 aa10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 PLIN4Q96Q06 1357 aa10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 FRMPD2Q68DX3 1309 aaPredicted RBP10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 PHIPQ8WWQ0 1821 aa10.37□□□□□ -0.75
SCAMP1-202ENST00000506858 A0A0G2JLL6 359 aaPredicted RBP10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 BTBD19C9JJ37 291 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 CXCL11O14625 94 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 ECM2O94769 699 aaPredicted RBP10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 TOP1P11387 765 aaKnown RBP10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 NOVP48745 357 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 SNAP25P60880 206 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 SNAPC2Q13487 334 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 FAM83BQ5T0W9 1011 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 TTBK2Q6IQ55 1244 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 USP17L2Q6R6M4 530 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 NFXL1Q6ZNB6 911 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 KCTD1Q719H9 257 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 PRRT2Q7Z6L0 340 aaPredicted RBP10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 BRF1Q92994 677 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 MKL1Q969V6 931 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 HHIPL1Q96JK4 782 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 KIAA1683Q9H0B3 1180 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 GPCPD1Q9NPB8 672 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 GINM1Q9NU53 330 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 PDRG1Q9NUG6 133 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 GREB1LQ9C091 1923 aaPredicted RBP10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 UNCXA6NJT0 531 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 PPFIA3O75145 1194 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 ZBTB48P10074 688 aaPredicted RBP10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 CYP2C8P10632 490 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 VCAM1P19320 739 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 PSMA5P28066 241 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 SLC16A2P36021 539 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 GTF2A2P52657 109 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 ANAPC15P60006 121 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 FGD1P98174 961 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 TOB2Q14106 344 aaPredicted RBP10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 PNMA1Q8ND90 353 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 NUP133Q8WUM0 1156 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 ANKS1AQ92625 1134 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 TM6SF1Q9BZW5 370 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 R3HDMLQ9H3Y0 253 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 RPAP3Q9H6T3 665 aaPredicted RBP10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 VCPKMTQ9H867 229 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 KAT14Q9H8E8 782 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 TMOD4Q9NZQ9 345 aa10.36□□□□□ -0.75
SCAMP1-202ENST00000506858 ERICH2A1L162 156 aa10.35□□□□□ -0.75
SCAMP1-202ENST00000506858 CD2BP2O95400 341 aaKnown RBP10.35□□□□□ -0.75
SCAMP1-202ENST00000506858 CETPP11597 493 aa10.35□□□□□ -0.75
SCAMP1-202ENST00000506858 TAL1P17542 331 aaPredicted RBP10.35□□□□□ -0.75
SCAMP1-202ENST00000506858 AK2P54819 239 aa10.35□□□□□ -0.75
SCAMP1-202ENST00000506858 DGKHQ86XP1 1220 aa10.35□□□□□ -0.75
SCAMP1-202ENST00000506858 CMTR1Q8N1G2 835 aaKnown RBP10.35□□□□□ -0.75
SCAMP1-202ENST00000506858 STAG2Q8N3U4 1231 aa10.35□□□□□ -0.75
SCAMP1-202ENST00000506858 TMEM87BQ96K49 555 aa10.35□□□□□ -0.75
SCAMP1-202ENST00000506858 TTC14Q96N46 770 aa10.35□□□□□ -0.75
SCAMP1-202ENST00000506858 UBA5Q9GZZ9 404 aa10.35□□□□□ -0.75
SCAMP1-202ENST00000506858 TSKSQ9UJT2 592 aa10.35□□□□□ -0.75
SCAMP1-202ENST00000506858 KLF18A0A0U1RQI7 1052 aa10.34□□□□□ -0.75
SCAMP1-202ENST00000506858 MANSC4A6NHS7 340 aaPredicted RBP10.34□□□□□ -0.75
SCAMP1-202ENST00000506858 C19orf81C9J6K1 198 aa10.34□□□□□ -0.75
SCAMP1-202ENST00000506858 PDHXO00330 501 aa10.34□□□□□ -0.75
SCAMP1-202ENST00000506858 EIF5BO60841 1220 aaKnown RBP10.34□□□□□ -0.75
SCAMP1-202ENST00000506858 STK3Q13188 491 aa10.34□□□□□ -0.75
SCAMP1-202ENST00000506858 NOGQ13253 232 aa10.34□□□□□ -0.75
SCAMP1-202ENST00000506858 SART3Q15020 963 aaKnown RBP10.34□□□□□ -0.75
SCAMP1-202ENST00000506858 CCDC96Q2M329 555 aa10.34□□□□□ -0.75
SCAMP1-202ENST00000506858 SH3D19Q5HYK7 790 aa10.34□□□□□ -0.75
SCAMP1-202ENST00000506858 POTEEQ6S8J3 1075 aa10.34□□□□□ -0.75
SCAMP1-202ENST00000506858 MICU3Q86XE3 530 aa10.34□□□□□ -0.75
SCAMP1-202ENST00000506858 ZNF654Q8IZM8 581 aa10.34□□□□□ -0.75
SCAMP1-202ENST00000506858 PIBF1Q8WXW3 757 aa10.34□□□□□ -0.75
SCAMP1-202ENST00000506858 P2RX7Q99572 595 aaKnown RBP10.34□□□□□ -0.75
SCAMP1-202ENST00000506858 TANGO6Q9C0B7 1094 aa10.34□□□□□ -0.75
SCAMP1-202ENST00000506858 OCEL1Q9H607 264 aa10.34□□□□□ -0.75
SCAMP1-202ENST00000506858 BAZ2BQ9UIF8 2168 aaKnown RBP10.34□□□□□ -0.75
SCAMP1-202ENST00000506858 CCDC69A6NI79 296 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 TMEM232C9JQI7 657 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 LARGE1O95461 756 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 HMGB1P09429 215 aaKnown RBP10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 PDHBP11177 359 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 CCT2P78371 535 aaKnown RBP10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 SLC35G1Q2M3R5 365 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 NBPF11Q86T75 865 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 CCDC82Q8N4S0 544 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 NECAB1Q8N987 351 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 IL17RAQ96F46 866 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 NCOA5Q9HCD5 579 aaKnown RBP10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 VAT1LQ9HCJ6 419 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 GOPCQ9HD26 462 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 TPCN1Q9ULQ1 816 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 MYH4Q9Y623 1939 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 hCG_1642624A0A1W2PR95 340 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 TESPA1A2RU30 521 aaPredicted RBP10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 TRPA1O75762 1119 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 TBC1D8O95759 1140 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 BMP3P12645 472 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 LIFRP42702 1097 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 SLC1A4P43007 532 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 TM4SF4P48230 202 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms