RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 CWC22Q9HCG8 908 aaKnown RBP8.74□□□□□ -1.01
HERC4-213ENST00000506515 GP6Q9HCN6 339 aa8.74□□□□□ -1.01
HERC4-213ENST00000506515 ATG3Q9NT62 314 aa8.74□□□□□ -1.01
HERC4-213ENST00000506515 CADPSQ9ULU8 1353 aa8.73□□□□□ -1.01
HERC4-213ENST00000506515 GNAT3A8MTJ3 354 aa8.73□□□□□ -1.01
HERC4-213ENST00000506515 PPM1BO75688 479 aa8.73□□□□□ -1.01
HERC4-213ENST00000506515 IGLV1-40P01703 118 aa8.73□□□□□ -1.01
HERC4-213ENST00000506515 ITGA4P13612 1032 aa8.73□□□□□ -1.01
HERC4-213ENST00000506515 FSTP19883 344 aa8.73□□□□□ -1.01
HERC4-213ENST00000506515 KIR3DL1P43629 444 aa8.73□□□□□ -1.01
HERC4-213ENST00000506515 FAM181AQ8N9Y4 354 aa8.73□□□□□ -1.01
HERC4-213ENST00000506515 LRRN4CLQ8ND94 238 aa8.73□□□□□ -1.01
HERC4-213ENST00000506515 LGR4Q9BXB1 951 aa8.73□□□□□ -1.01
HERC4-213ENST00000506515 WHRNQ9P202 907 aa8.73□□□□□ -1.01
HERC4-213ENST00000506515 IQCA1LA6NCM1 817 aa8.72□□□□□ -1.01
HERC4-213ENST00000506515 IGF2BP3O00425 579 aaKnown RBP eCLIP8.72□□□□□ -1.01
HERC4-213ENST00000506515 H2AFB1P0C5Y9 115 aa8.72□□□□□ -1.01
HERC4-213ENST00000506515 H2AFB2P0C5Z0 115 aa8.72□□□□□ -1.01
HERC4-213ENST00000506515 TNK2Q07912 1038 aa8.72□□□□□ -1.01
HERC4-213ENST00000506515 TMC3Q7Z5M5 1100 aa8.72□□□□□ -1.01
HERC4-213ENST00000506515 MFSD4AQ8N468 514 aa8.72□□□□□ -1.01
HERC4-213ENST00000506515 ZNF669Q96BR6 464 aaPredicted RBP8.72□□□□□ -1.01
HERC4-213ENST00000506515 SPOCK3Q9BQ16 436 aa8.72□□□□□ -1.01
HERC4-213ENST00000506515 SPATA9Q9BWV2 254 aa8.72□□□□□ -1.01
HERC4-213ENST00000506515 LRRC4CQ9HCJ2 640 aa8.72□□□□□ -1.01
HERC4-213ENST00000506515 GFOD1Q9NXC2 390 aa8.72□□□□□ -1.01
HERC4-213ENST00000506515 FAM155AB1AL88 458 aaPredicted RBP8.71□□□□□ -1.02
HERC4-213ENST00000506515 MEIS1O00470 390 aa8.71□□□□□ -1.02
HERC4-213ENST00000506515 GSC2O15499 205 aa8.71□□□□□ -1.02
HERC4-213ENST00000506515 PROCP04070 461 aa8.71□□□□□ -1.02
HERC4-213ENST00000506515 ZNF865P0CJ78 1059 aaPredicted RBP8.71□□□□□ -1.02
HERC4-213ENST00000506515 ITIH2P19823 946 aa8.71□□□□□ -1.02
HERC4-213ENST00000506515 ZNF445P59923 1031 aa8.71□□□□□ -1.02
HERC4-213ENST00000506515 PPP2R5DQ14738 602 aa8.71□□□□□ -1.02
HERC4-213ENST00000506515 C2orf27AQ580R0 203 aa8.71□□□□□ -1.02
HERC4-213ENST00000506515 LRRC47Q8N1G4 583 aaKnown RBP8.71□□□□□ -1.02
HERC4-213ENST00000506515 THAP3Q8WTV1 239 aaPredicted RBP8.71□□□□□ -1.02
HERC4-213ENST00000506515 METTL22Q9BUU2 404 aaPredicted RBP8.71□□□□□ -1.02
HERC4-213ENST00000506515 ASCC2Q9H1I8 757 aaPredicted RBP8.71□□□□□ -1.02
HERC4-213ENST00000506515 NOL6Q9H6R4 1146 aaKnown RBP8.71□□□□□ -1.02
HERC4-213ENST00000506515 LEMD3Q9Y2U8 911 aa8.71□□□□□ -1.02
HERC4-213ENST00000506515 CAPN6Q9Y6Q1 641 aa8.71□□□□□ -1.02
HERC4-213ENST00000506515 U3KQE9 123 aa8.71□□□□□ -1.02
HERC4-213ENST00000506515 A0A1W2PQU0 124 aa8.7□□□□□ -1.02
HERC4-213ENST00000506515 NOP56O00567 594 aaKnown RBP8.7□□□□□ -1.02
HERC4-213ENST00000506515 MSTNO14793 375 aa8.7□□□□□ -1.02
HERC4-213ENST00000506515 ITGAVP06756 1048 aa8.7□□□□□ -1.02
HERC4-213ENST00000506515 RSPO4Q2I0M5 234 aaPredicted RBP8.7□□□□□ -1.02
HERC4-213ENST00000506515 NKAPLQ5M9Q1 402 aa8.7□□□□□ -1.02
HERC4-213ENST00000506515 GPAT2Q6NUI2 795 aa8.7□□□□□ -1.02
HERC4-213ENST00000506515 ZNF513Q8N8E2 541 aaPredicted RBP8.7□□□□□ -1.02
HERC4-213ENST00000506515 BVESQ8NE79 360 aa8.7□□□□□ -1.02
HERC4-213ENST00000506515 DSCC1Q9BVC3 393 aa8.7□□□□□ -1.02
HERC4-213ENST00000506515 MINPP1Q9UNW1 487 aa8.7□□□□□ -1.02
HERC4-213ENST00000506515 AKT3Q9Y243 479 aa8.7□□□□□ -1.02
HERC4-213ENST00000506515 ESYT3A0FGR9 886 aa8.69□□□□□ -1.02
HERC4-213ENST00000506515 PRAMEF1O95521 474 aa8.69□□□□□ -1.02
HERC4-213ENST00000506515 FAM153BP0C7A2 387 aa8.69□□□□□ -1.02
HERC4-213ENST00000506515 OXCT1P55809 520 aa8.69□□□□□ -1.02
HERC4-213ENST00000506515 NMIQ13287 307 aaPredicted RBP8.69□□□□□ -1.02
HERC4-213ENST00000506515 CLEC16AQ2KHT3 1053 aa8.69□□□□□ -1.02
HERC4-213ENST00000506515 CDKAL1Q5VV42 579 aa8.69□□□□□ -1.02
HERC4-213ENST00000506515 C22orf34Q6ZV56 151 aa8.69□□□□□ -1.02
HERC4-213ENST00000506515 FIBCD1Q8N539 461 aa8.69□□□□□ -1.02
HERC4-213ENST00000506515 SGSM3Q96HU1 749 aa8.69□□□□□ -1.02
HERC4-213ENST00000506515 FANCLQ9NW38 375 aa8.69□□□□□ -1.02
HERC4-213ENST00000506515 PTCH2Q9Y6C5 1203 aa8.69□□□□□ -1.02
HERC4-213ENST00000506515 SHISA3A0PJX4 238 aa8.68□□□□□ -1.02
HERC4-213ENST00000506515 SIGLEC6O43699 453 aa8.68□□□□□ -1.02
HERC4-213ENST00000506515 SQSTM1Q13501 440 aa8.68□□□□□ -1.02
HERC4-213ENST00000506515 ZNF227Q86WZ6 799 aa8.68□□□□□ -1.02
HERC4-213ENST00000506515 PIWIL2Q8TC59 973 aaKnown RBP8.68□□□□□ -1.02
HERC4-213ENST00000506515 CHST7Q9NS84 486 aa8.68□□□□□ -1.02
HERC4-213ENST00000506515 CGGBP1Q9UFW8 167 aaPredicted RBP8.68□□□□□ -1.02
HERC4-213ENST00000506515 FHOD1Q9Y613 1164 aa8.68□□□□□ -1.02
HERC4-213ENST00000506515 CYP26A1O43174 497 aa8.67□□□□□ -1.02
HERC4-213ENST00000506515 TBX1O43435 398 aa8.67□□□□□ -1.02
HERC4-213ENST00000506515 DYRK3O43781 588 aa8.67□□□□□ -1.02
HERC4-213ENST00000506515 ADCY3O60266 1144 aa8.67□□□□□ -1.02
HERC4-213ENST00000506515 PPP2R2AP63151 447 aa8.67□□□□□ -1.02
HERC4-213ENST00000506515 ARHGEF39Q8N4T4 335 aa8.67□□□□□ -1.02
HERC4-213ENST00000506515 ZBTB38Q8NAP3 1195 aaPredicted RBP8.67□□□□□ -1.02
HERC4-213ENST00000506515 SYTL5Q8TDW5 730 aaPredicted RBP8.67□□□□□ -1.02
HERC4-213ENST00000506515 APPBP2Q92624 585 aa8.67□□□□□ -1.02
HERC4-213ENST00000506515 RCC1LQ96I51 464 aaKnown RBP8.67□□□□□ -1.02
HERC4-213ENST00000506515 ZDHHC15Q96MV8 337 aa8.67□□□□□ -1.02
HERC4-213ENST00000506515 EMC9Q9Y3B6 208 aa8.67□□□□□ -1.02
HERC4-213ENST00000506515 A0A087WZG4 1122 aa8.66□□□□□ -1.02
HERC4-213ENST00000506515 CDC45O75419 566 aa8.66□□□□□ -1.02
HERC4-213ENST00000506515 KCNH1O95259 989 aa8.66□□□□□ -1.02
HERC4-213ENST00000506515 CEACAM5P06731 702 aa8.66□□□□□ -1.02
HERC4-213ENST00000506515 HSP90AA2PQ14568 343 aaPredicted RBP8.66□□□□□ -1.02
HERC4-213ENST00000506515 NKPD1Q17RQ9 610 aa8.66□□□□□ -1.02
HERC4-213ENST00000506515 POMZP3Q6PJE2 187 aa8.66□□□□□ -1.02
HERC4-213ENST00000506515 CRACR2BQ8N4Y2 399 aaPredicted RBP8.66□□□□□ -1.02
HERC4-213ENST00000506515 JMYQ8N9B5 988 aa8.66□□□□□ -1.02
HERC4-213ENST00000506515 ARHGEF4Q9NR80 690 aa8.66□□□□□ -1.02
HERC4-213ENST00000506515 TMEM260Q9NX78 707 aa8.66□□□□□ -1.02
HERC4-213ENST00000506515 PRR13Q9NZ81 148 aa8.66□□□□□ -1.02
HERC4-213ENST00000506515 DIS3Q9Y2L1 958 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms