RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 NBPF3Q9H094 633 aa17.2■□□□□ 0.34
CDC42SE2-209ENST00000506419 INCENPQ9NQS7 918 aa17.2■□□□□ 0.34
CDC42SE2-209ENST00000506419 RBM27Q9P2N5 1060 aaKnown RBP17.2■□□□□ 0.34
CDC42SE2-209ENST00000506419 CLIP2Q9UDT6 1046 aa17.2■□□□□ 0.34
CDC42SE2-209ENST00000506419 ROBO3Q96MS0 1386 aa17.19■□□□□ 0.34
CDC42SE2-209ENST00000506419 F5H6K3 240 aa17.19■□□□□ 0.34
CDC42SE2-209ENST00000506419 PDE1AP54750 535 aa17.19■□□□□ 0.34
CDC42SE2-209ENST00000506419 KLRC3Q07444 240 aa17.19■□□□□ 0.34
CDC42SE2-209ENST00000506419 DPP9Q86TI2 863 aa17.19■□□□□ 0.34
CDC42SE2-209ENST00000506419 NCAPG2Q86XI2 1143 aa17.19■□□□□ 0.34
CDC42SE2-209ENST00000506419 ZNF444Q8N0Y2 327 aaPredicted RBP17.19■□□□□ 0.34
CDC42SE2-209ENST00000506419 REPS2Q8NFH8 660 aa17.19■□□□□ 0.34
CDC42SE2-209ENST00000506419 MKL1Q969V6 931 aa17.19■□□□□ 0.34
CDC42SE2-209ENST00000506419 MROH8Q9H579 483 aa17.19■□□□□ 0.34
CDC42SE2-209ENST00000506419 C11orf49Q9H6J7 331 aa17.19■□□□□ 0.34
CDC42SE2-209ENST00000506419 PPP1R9AQ9ULJ8 1098 aa17.19■□□□□ 0.34
CDC42SE2-209ENST00000506419 TACC3Q9Y6A5 838 aa17.19■□□□□ 0.34
CDC42SE2-209ENST00000506419 RLFQ13129 1914 aa17.19■□□□□ 0.34
CDC42SE2-209ENST00000506419 VWA5AO00534 786 aa17.18■□□□□ 0.34
CDC42SE2-209ENST00000506419 RAD21O60216 631 aa17.18■□□□□ 0.34
CDC42SE2-209ENST00000506419 NDUFB10O96000 172 aa17.18■□□□□ 0.34
CDC42SE2-209ENST00000506419 IGHDP01880 384 aa17.18■□□□□ 0.34
CDC42SE2-209ENST00000506419 COL6A1P12109 1028 aa17.18■□□□□ 0.34
CDC42SE2-209ENST00000506419 GOPCQ9HD26 462 aa17.18■□□□□ 0.34
CDC42SE2-209ENST00000506419 PFASO15067 1338 aa17.18■□□□□ 0.34
CDC42SE2-209ENST00000506419 SZT2Q5T011 3432 aa17.17■□□□□ 0.34
CDC42SE2-209ENST00000506419 STAT3P40763 770 aa17.17■□□□□ 0.34
CDC42SE2-209ENST00000506419 FAM47AQ5JRC9 791 aa17.17■□□□□ 0.34
CDC42SE2-209ENST00000506419 PRAMEF19Q5SWL8 479 aa17.17■□□□□ 0.34
CDC42SE2-209ENST00000506419 VPS53Q5VIR6 699 aa17.17■□□□□ 0.34
CDC42SE2-209ENST00000506419 ABRAQ8N0Z2 381 aa17.17■□□□□ 0.34
CDC42SE2-209ENST00000506419 NEDD1Q8NHV4 660 aa17.17■□□□□ 0.34
CDC42SE2-209ENST00000506419 CEP95Q96GE4 821 aa17.17■□□□□ 0.34
CDC42SE2-209ENST00000506419 NACAP1Q9BZK3 213 aa17.17■□□□□ 0.34
CDC42SE2-209ENST00000506419 MTMR4Q9NYA4 1195 aa17.17■□□□□ 0.34
CDC42SE2-209ENST00000506419 MYH7P12883 1935 aa17.17■□□□□ 0.34
CDC42SE2-209ENST00000506419 TRIOBPQ9H2D6 2365 aa17.16■□□□□ 0.34
CDC42SE2-209ENST00000506419 SLC25A27O95847 323 aa17.16■□□□□ 0.34
CDC42SE2-209ENST00000506419 CNGA1P29973 690 aa17.16■□□□□ 0.34
CDC42SE2-209ENST00000506419 TFAP4Q01664 338 aa17.16■□□□□ 0.34
CDC42SE2-209ENST00000506419 PPARAQ07869 468 aa17.16■□□□□ 0.34
CDC42SE2-209ENST00000506419 OLFML2BQ68BL8 750 aa17.16■□□□□ 0.34
CDC42SE2-209ENST00000506419 RIOX2Q8IUF8 465 aa17.16■□□□□ 0.34
CDC42SE2-209ENST00000506419 EXOC6Q8TAG9 804 aa17.16■□□□□ 0.34
CDC42SE2-209ENST00000506419 EVI5LQ96CN4 794 aa17.16■□□□□ 0.34
CDC42SE2-209ENST00000506419 LNPKQ9C0E8 428 aa17.16■□□□□ 0.34
CDC42SE2-209ENST00000506419 NAPBQ9H115 298 aa17.16■□□□□ 0.34
CDC42SE2-209ENST00000506419 ZBTB47Q9UFB7 747 aaPredicted RBP17.16■□□□□ 0.34
CDC42SE2-209ENST00000506419 DDX20Q9UHI6 824 aaKnown RBP17.16■□□□□ 0.34
CDC42SE2-209ENST00000506419 ZNF214Q9UL59 606 aaPredicted RBP17.16■□□□□ 0.34
CDC42SE2-209ENST00000506419 CTDSPL2Q05D32 466 aa17.15■□□□□ 0.34
CDC42SE2-209ENST00000506419 B4GALNT3Q6L9W6 998 aa17.15■□□□□ 0.34
CDC42SE2-209ENST00000506419 SMC5Q8IY18 1101 aa17.15■□□□□ 0.34
CDC42SE2-209ENST00000506419 C7orf61Q8IZ16 206 aa17.15■□□□□ 0.34
CDC42SE2-209ENST00000506419 PCDH10Q9P2E7 1040 aa17.15■□□□□ 0.34
CDC42SE2-209ENST00000506419 RIPK3Q9Y572 518 aa17.15■□□□□ 0.34
CDC42SE2-209ENST00000506419 PGK2P07205 417 aa17.14■□□□□ 0.33
CDC42SE2-209ENST00000506419 FCER1AP12319 257 aa17.14■□□□□ 0.33
CDC42SE2-209ENST00000506419 CYBAP13498 195 aa17.14■□□□□ 0.33
CDC42SE2-209ENST00000506419 MAML3Q96JK9 1138 aa17.14■□□□□ 0.33
CDC42SE2-209ENST00000506419 FAM227BQ96M60 508 aa17.14■□□□□ 0.33
CDC42SE2-209ENST00000506419 SLF1Q9BQI6 1058 aa17.14■□□□□ 0.33
CDC42SE2-209ENST00000506419 ZNF287Q9HBT7 754 aa17.14■□□□□ 0.33
CDC42SE2-209ENST00000506419 ZMYND8Q9ULU4 1186 aaPredicted RBP17.14■□□□□ 0.33
CDC42SE2-209ENST00000506419 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.14■□□□□ 0.33
CDC42SE2-209ENST00000506419 TTLL1O95922 423 aa17.13■□□□□ 0.33
CDC42SE2-209ENST00000506419 PDE4BQ07343 736 aa17.13■□□□□ 0.33
CDC42SE2-209ENST00000506419 AAMPQ13685 434 aa17.13■□□□□ 0.33
CDC42SE2-209ENST00000506419 LRRC26Q2I0M4 334 aa17.13■□□□□ 0.33
CDC42SE2-209ENST00000506419 ZNF792Q3KQV3 632 aa17.13■□□□□ 0.33
CDC42SE2-209ENST00000506419 ANO1Q5XXA6 986 aa17.13■□□□□ 0.33
CDC42SE2-209ENST00000506419 LRRC47Q8N1G4 583 aaKnown RBP17.13■□□□□ 0.33
CDC42SE2-209ENST00000506419 PRPF38AQ8NAV1 312 aaKnown RBP17.13■□□□□ 0.33
CDC42SE2-209ENST00000506419 MMP19Q99542 508 aa17.13■□□□□ 0.33
CDC42SE2-209ENST00000506419 RWDD1Q9H446 243 aaPredicted RBP17.13■□□□□ 0.33
CDC42SE2-209ENST00000506419 IL17RBQ9NRM6 502 aa17.13■□□□□ 0.33
CDC42SE2-209ENST00000506419 HELLSQ9NRZ9 838 aa17.13■□□□□ 0.33
CDC42SE2-209ENST00000506419 DNAH12Q6ZR08 3092 aa17.12■□□□□ 0.33
CDC42SE2-209ENST00000506419 A0A0D9SFI3 127 aa17.12■□□□□ 0.33
CDC42SE2-209ENST00000506419 TSPY3P0CV98 308 aa17.12■□□□□ 0.33
CDC42SE2-209ENST00000506419 TSPY8P0CW00 308 aa17.12■□□□□ 0.33
CDC42SE2-209ENST00000506419 ALX1Q15699 326 aa17.12■□□□□ 0.33
CDC42SE2-209ENST00000506419 SLFN13Q68D06 897 aa17.12■□□□□ 0.33
CDC42SE2-209ENST00000506419 GMCL1P1Q8NEA9 526 aa17.12■□□□□ 0.33
CDC42SE2-209ENST00000506419 ANAPC4Q9UJX5 808 aa17.12■□□□□ 0.33
CDC42SE2-209ENST00000506419 NMT2O60551 498 aa17.11■□□□□ 0.33
CDC42SE2-209ENST00000506419 FGAP02671 866 aa17.11■□□□□ 0.33
CDC42SE2-209ENST00000506419 SLC3A2P08195 630 aaKnown RBP17.11■□□□□ 0.33
CDC42SE2-209ENST00000506419 TAL1P17542 331 aaPredicted RBP17.11■□□□□ 0.33
CDC42SE2-209ENST00000506419 SYN1P17600 705 aa17.11■□□□□ 0.33
CDC42SE2-209ENST00000506419 MCMDC2Q4G0Z9 681 aa17.11■□□□□ 0.33
CDC42SE2-209ENST00000506419 PLEKHM2Q8IWE5 1019 aa17.11■□□□□ 0.33
CDC42SE2-209ENST00000506419 KIFC2Q96AC6 838 aa17.11■□□□□ 0.33
CDC42SE2-209ENST00000506419 CHMP4CQ96CF2 233 aa17.11■□□□□ 0.33
CDC42SE2-209ENST00000506419 GDF15Q99988 308 aa17.11■□□□□ 0.33
CDC42SE2-209ENST00000506419 SENP6Q9GZR1 1112 aaPredicted RBP17.11■□□□□ 0.33
CDC42SE2-209ENST00000506419 SLC5A4Q9NY91 659 aa17.11■□□□□ 0.33
CDC42SE2-209ENST00000506419 FEM1BQ9UK73 627 aa17.11■□□□□ 0.33
CDC42SE2-209ENST00000506419 GREB1LQ9C091 1923 aaPredicted RBP17.11■□□□□ 0.33
CDC42SE2-209ENST00000506419 A0A0G2JMZ2 1700 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms