RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 CALM2P0DP24 149 aa13.24□□□□□ -0.29
SGCA-205ENST00000505964 CALM3P0DP25 149 aa13.24□□□□□ -0.29
SGCA-205ENST00000505964 AKR1B1P15121 316 aa13.24□□□□□ -0.29
SGCA-205ENST00000505964 ARHGEF6Q15052 776 aa13.24□□□□□ -0.29
SGCA-205ENST00000505964 MTFR1Q15390 333 aa13.24□□□□□ -0.29
SGCA-205ENST00000505964 RCSD1Q6JBY9 416 aa13.24□□□□□ -0.29
SGCA-205ENST00000505964 DPF3Q92784 378 aa13.24□□□□□ -0.29
SGCA-205ENST00000505964 LLPHQ9BRT6 129 aaKnown RBP13.24□□□□□ -0.29
SGCA-205ENST00000505964 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.24□□□□□ -0.29
SGCA-205ENST00000505964 LAMA2P24043 3122 aaKnown RBP13.23□□□□□ -0.29
SGCA-205ENST00000505964 GOLGA8BA8MQT2 603 aa13.23□□□□□ -0.29
SGCA-205ENST00000505964 NMT2O60551 498 aa13.23□□□□□ -0.29
SGCA-205ENST00000505964 DDAH1O94760 285 aa13.23□□□□□ -0.29
SGCA-205ENST00000505964 GTF2A2P52657 109 aa13.23□□□□□ -0.29
SGCA-205ENST00000505964 ST3GAL1Q11201 340 aa13.23□□□□□ -0.29
SGCA-205ENST00000505964 DCAF15Q66K64 600 aa13.23□□□□□ -0.29
SGCA-205ENST00000505964 TMEM179Q6ZVK1 233 aa13.23□□□□□ -0.29
SGCA-205ENST00000505964 CATIPQ7Z7H3 387 aa13.23□□□□□ -0.29
SGCA-205ENST00000505964 CCDC83Q8IWF9 413 aa13.23□□□□□ -0.29
SGCA-205ENST00000505964 ZNF654Q8IZM8 581 aa13.23□□□□□ -0.29
SGCA-205ENST00000505964 SHISA4Q96DD7 197 aa13.23□□□□□ -0.29
SGCA-205ENST00000505964 MAP3K14Q99558 947 aa13.23□□□□□ -0.29
SGCA-205ENST00000505964 SENP2Q9HC62 589 aa13.23□□□□□ -0.29
SGCA-205ENST00000505964 GINM1Q9NU53 330 aa13.23□□□□□ -0.29
SGCA-205ENST00000505964 DOCK3Q8IZD9 2030 aa13.23□□□□□ -0.29
SGCA-205ENST00000505964 ALPK3Q96L96 1907 aa13.23□□□□□ -0.29
SGCA-205ENST00000505964 CCDC196A0A1B0GTZ2 297 aa13.22□□□□□ -0.29
SGCA-205ENST00000505964 FAM196BA6NMK8 535 aa13.22□□□□□ -0.29
SGCA-205ENST00000505964 TOP1P11387 765 aaKnown RBP13.22□□□□□ -0.29
SGCA-205ENST00000505964 METAP2P50579 478 aaKnown RBP eCLIP13.22□□□□□ -0.29
SGCA-205ENST00000505964 MAP3K9P80192 1104 aa13.22□□□□□ -0.29
SGCA-205ENST00000505964 LACTBP83111 547 aaPredicted RBP13.22□□□□□ -0.29
SGCA-205ENST00000505964 SCRN1Q12765 414 aa13.22□□□□□ -0.29
SGCA-205ENST00000505964 TROAPQ12815 778 aa13.22□□□□□ -0.29
SGCA-205ENST00000505964 STK3Q13188 491 aa13.22□□□□□ -0.29
SGCA-205ENST00000505964 ABCB5Q2M3G0 1257 aa13.22□□□□□ -0.29
SGCA-205ENST00000505964 NECAB1Q8N987 351 aa13.22□□□□□ -0.29
SGCA-205ENST00000505964 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.22□□□□□ -0.29
SGCA-205ENST00000505964 CEP95Q96GE4 821 aa13.22□□□□□ -0.29
SGCA-205ENST00000505964 KAT14Q9H8E8 782 aa13.22□□□□□ -0.29
SGCA-205ENST00000505964 KANSL2Q9H9L4 492 aa13.22□□□□□ -0.29
SGCA-205ENST00000505964 CABP5Q9NP86 173 aa13.22□□□□□ -0.29
SGCA-205ENST00000505964 MTMR4Q9NYA4 1195 aa13.22□□□□□ -0.29
SGCA-205ENST00000505964 SYNPO2Q9UMS6 1093 aa13.22□□□□□ -0.29
SGCA-205ENST00000505964 CSADQ9Y600 493 aa13.22□□□□□ -0.29
SGCA-205ENST00000505964 BTBD19C9JJ37 291 aa13.21□□□□□ -0.29
SGCA-205ENST00000505964 DLL1O00548 723 aa13.21□□□□□ -0.29
SGCA-205ENST00000505964 TTLL1O95922 423 aa13.21□□□□□ -0.29
SGCA-205ENST00000505964 SLURP2P0DP57 97 aa13.21□□□□□ -0.29
SGCA-205ENST00000505964 DDIT3P35638 169 aa13.21□□□□□ -0.29
SGCA-205ENST00000505964 KIF22Q14807 665 aa13.21□□□□□ -0.29
SGCA-205ENST00000505964 CPLX2Q6PUV4 134 aaKnown RBP13.21□□□□□ -0.29
SGCA-205ENST00000505964 MKL1Q969V6 931 aa13.21□□□□□ -0.29
SGCA-205ENST00000505964 TMEM47Q9BQJ4 181 aa13.21□□□□□ -0.29
SGCA-205ENST00000505964 ZNF341Q9BYN7 854 aa13.21□□□□□ -0.29
SGCA-205ENST00000505964 NYAP2Q9P242 653 aa13.21□□□□□ -0.29
SGCA-205ENST00000505964 CIZ1Q9ULV3 898 aaPredicted RBP13.21□□□□□ -0.29
SGCA-205ENST00000505964 NAP1L2Q9ULW6 460 aaPredicted RBP13.21□□□□□ -0.29
SGCA-205ENST00000505964 STX8Q9UNK0 236 aa13.21□□□□□ -0.29
SGCA-205ENST00000505964 GOLGA8AA7E2F4 631 aa13.2□□□□□ -0.3
SGCA-205ENST00000505964 PHF20L1A8MW92 1017 aa13.2□□□□□ -0.3
SGCA-205ENST00000505964 MPHOSPH10O00566 681 aaKnown RBP13.2□□□□□ -0.3
SGCA-205ENST00000505964 TLR2O60603 784 aa13.2□□□□□ -0.3
SGCA-205ENST00000505964 CDKL5O76039 1030 aa13.2□□□□□ -0.3
SGCA-205ENST00000505964 PDIA4P13667 645 aaKnown RBP13.2□□□□□ -0.3
SGCA-205ENST00000505964 CTGFP29279 349 aa13.2□□□□□ -0.3
SGCA-205ENST00000505964 GUCY1A2P33402 732 aa13.2□□□□□ -0.3
SGCA-205ENST00000505964 CAP2P40123 477 aa13.2□□□□□ -0.3
SGCA-205ENST00000505964 CCT2P78371 535 aaKnown RBP13.2□□□□□ -0.3
SGCA-205ENST00000505964 RTN1Q16799 776 aa13.2□□□□□ -0.3
SGCA-205ENST00000505964 MIGA2Q7L4E1 593 aa13.2□□□□□ -0.3
SGCA-205ENST00000505964 MICU3Q86XE3 530 aa13.2□□□□□ -0.3
SGCA-205ENST00000505964 FANCBQ8NB91 859 aa13.2□□□□□ -0.3
SGCA-205ENST00000505964 SPRYD3Q8NCJ5 442 aa13.2□□□□□ -0.3
SGCA-205ENST00000505964 PNMA1Q8ND90 353 aa13.2□□□□□ -0.3
SGCA-205ENST00000505964 SLC17A8Q8NDX2 589 aa13.2□□□□□ -0.3
SGCA-205ENST00000505964 SMARCC2Q8TAQ2 1214 aa13.2□□□□□ -0.3
SGCA-205ENST00000505964 RBM28Q9NW13 759 aaKnown RBP13.2□□□□□ -0.3
SGCA-205ENST00000505964 ZNF112Q9UJU3 913 aa13.2□□□□□ -0.3
SGCA-205ENST00000505964 SMC3Q9UQE7 1217 aa13.2□□□□□ -0.3
SGCA-205ENST00000505964 PHIPQ8WWQ0 1821 aa13.2□□□□□ -0.3
SGCA-205ENST00000505964 CPLX1O14810 134 aa13.19□□□□□ -0.3
SGCA-205ENST00000505964 CTNND1O60716 968 aaKnown RBP13.19□□□□□ -0.3
SGCA-205ENST00000505964 ASNSP08243 561 aa13.19□□□□□ -0.3
SGCA-205ENST00000505964 HMGN5P82970 282 aaKnown RBP13.19□□□□□ -0.3
SGCA-205ENST00000505964 RRP1BQ14684 758 aaKnown RBP13.19□□□□□ -0.3
SGCA-205ENST00000505964 SEPT2Q15019 361 aa13.19□□□□□ -0.3
SGCA-205ENST00000505964 NSUN7Q8NE18 718 aaKnown RBP13.19□□□□□ -0.3
SGCA-205ENST00000505964 CTCFLQ8NI51 663 aaPredicted RBP13.19□□□□□ -0.3
SGCA-205ENST00000505964 ZKSCAN4Q969J2 545 aaPredicted RBP13.19□□□□□ -0.3
SGCA-205ENST00000505964 WRNIP1Q96S55 665 aa13.19□□□□□ -0.3
SGCA-205ENST00000505964 FAM217BQ9NTX9 383 aaPredicted RBP13.19□□□□□ -0.3
SGCA-205ENST00000505964 CPA4Q9UI42 421 aa13.19□□□□□ -0.3
SGCA-205ENST00000505964 ZBTB21Q9ULJ3 1066 aa13.19□□□□□ -0.3
SGCA-205ENST00000505964 SNCAIPQ9Y6H5 919 aa13.19□□□□□ -0.3
SGCA-205ENST00000505964 SPDYE5A6NIY4 337 aa13.18□□□□□ -0.3
SGCA-205ENST00000505964 IRF6O14896 467 aa13.18□□□□□ -0.3
SGCA-205ENST00000505964 GDF11O95390 407 aa13.18□□□□□ -0.3
SGCA-205ENST00000505964 CTDNEP1O95476 244 aa13.18□□□□□ -0.3
SGCA-205ENST00000505964 GH2P01242 217 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms