RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 DBNLQ9UJU6 430 aaKnown RBP11.97□□□□□ -0.49
NEDD9-210ENST00000505589 FAM184BQ9ULE4 1060 aa11.97□□□□□ -0.49
NEDD9-210ENST00000505589 LAMA2P24043 3122 aaKnown RBP11.97□□□□□ -0.49
NEDD9-210ENST00000505589 ELP1O95163 1332 aa11.96□□□□□ -0.49
NEDD9-210ENST00000505589 PQBP1O60828 265 aaKnown RBP11.96□□□□□ -0.49
NEDD9-210ENST00000505589 DNAJB2P25686 324 aa11.96□□□□□ -0.49
NEDD9-210ENST00000505589 GUCY1A2P33402 732 aa11.96□□□□□ -0.49
NEDD9-210ENST00000505589 STAT3P40763 770 aa11.96□□□□□ -0.49
NEDD9-210ENST00000505589 FAM47AQ5JRC9 791 aa11.96□□□□□ -0.49
NEDD9-210ENST00000505589 SLC9C2Q5TAH2 1124 aa11.96□□□□□ -0.49
NEDD9-210ENST00000505589 MFSD5Q6N075 450 aa11.96□□□□□ -0.49
NEDD9-210ENST00000505589 SH3RF1Q7Z6J0 888 aa11.96□□□□□ -0.49
NEDD9-210ENST00000505589 TMEM199Q8N511 208 aa11.96□□□□□ -0.49
NEDD9-210ENST00000505589 TIFAQ96CG3 184 aa11.96□□□□□ -0.49
NEDD9-210ENST00000505589 EAF2Q96CJ1 260 aaPredicted RBP11.96□□□□□ -0.49
NEDD9-210ENST00000505589 RIOK1Q9BRS2 568 aaKnown RBP11.96□□□□□ -0.49
NEDD9-210ENST00000505589 SEZ6LQ9BYH1 1024 aa11.96□□□□□ -0.49
NEDD9-210ENST00000505589 KANSL2Q9H9L4 492 aa11.96□□□□□ -0.49
NEDD9-210ENST00000505589 GOPCQ9HD26 462 aa11.96□□□□□ -0.49
NEDD9-210ENST00000505589 MYH1P12882 1939 aa11.96□□□□□ -0.5
NEDD9-210ENST00000505589 MAST2Q6P0Q8 1798 aa11.95□□□□□ -0.5
NEDD9-210ENST00000505589 A0A1W2PQ45 241 aaPredicted RBP11.95□□□□□ -0.5
NEDD9-210ENST00000505589 A0A1W2PQY0 241 aa11.95□□□□□ -0.5
NEDD9-210ENST00000505589 A0A1W2PRG0 241 aa11.95□□□□□ -0.5
NEDD9-210ENST00000505589 TLR3O15455 904 aaKnown RBP11.95□□□□□ -0.5
NEDD9-210ENST00000505589 BCAR3O75815 825 aa11.95□□□□□ -0.5
NEDD9-210ENST00000505589 COL9A1P20849 921 aa11.95□□□□□ -0.5
NEDD9-210ENST00000505589 ICA1Q05084 483 aa11.95□□□□□ -0.5
NEDD9-210ENST00000505589 ZNF792Q3KQV3 632 aa11.95□□□□□ -0.5
NEDD9-210ENST00000505589 AKNAD1Q5T1N1 836 aa11.95□□□□□ -0.5
NEDD9-210ENST00000505589 CCDC129Q6ZRS4 1044 aa11.95□□□□□ -0.5
NEDD9-210ENST00000505589 FTSJ3Q8IY81 847 aaKnown RBP11.95□□□□□ -0.5
NEDD9-210ENST00000505589 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.95□□□□□ -0.5
NEDD9-210ENST00000505589 CLUAP1Q96AJ1 413 aa11.95□□□□□ -0.5
NEDD9-210ENST00000505589 VTI1AQ96AJ9 217 aa11.95□□□□□ -0.5
NEDD9-210ENST00000505589 DDX11Q96FC9 970 aa11.95□□□□□ -0.5
NEDD9-210ENST00000505589 MSRAQ9UJ68 235 aa11.95□□□□□ -0.5
NEDD9-210ENST00000505589 ADAMTS5Q9UNA0 930 aa11.95□□□□□ -0.5
NEDD9-210ENST00000505589 CTDP1Q9Y5B0 961 aaPredicted RBP11.95□□□□□ -0.5
NEDD9-210ENST00000505589 RLFQ13129 1914 aa11.95□□□□□ -0.5
NEDD9-210ENST00000505589 SIPA1L1O43166 1804 aa11.95□□□□□ -0.5
NEDD9-210ENST00000505589 FOCADQ5VW36 1801 aa11.95□□□□□ -0.5
NEDD9-210ENST00000505589 SYNGAP1Q96PV0 1343 aa11.94□□□□□ -0.5
NEDD9-210ENST00000505589 DUSP11O75319 330 aaKnown RBP11.94□□□□□ -0.5
NEDD9-210ENST00000505589 ACLYP53396 1101 aa11.94□□□□□ -0.5
NEDD9-210ENST00000505589 MRPS5P82675 430 aaKnown RBP11.94□□□□□ -0.5
NEDD9-210ENST00000505589 FAAP100Q0VG06 881 aa11.94□□□□□ -0.5
NEDD9-210ENST00000505589 GRIN2CQ14957 1233 aa11.94□□□□□ -0.5
NEDD9-210ENST00000505589 PSRC1Q6PGN9 363 aaPredicted RBP11.94□□□□□ -0.5
NEDD9-210ENST00000505589 CLASRPQ8N2M8 674 aaKnown RBP11.94□□□□□ -0.5
NEDD9-210ENST00000505589 ATG4CQ96DT6 458 aa11.94□□□□□ -0.5
NEDD9-210ENST00000505589 DCP1AQ9NPI6 582 aaPredicted RBP11.94□□□□□ -0.5
NEDD9-210ENST00000505589 FRMPD3Q5JV73 1810 aa11.93□□□□□ -0.5
NEDD9-210ENST00000505589 PGK1P00558 417 aa11.93□□□□□ -0.5
NEDD9-210ENST00000505589 ZNF865P0CJ78 1059 aaPredicted RBP11.93□□□□□ -0.5
NEDD9-210ENST00000505589 TMEM132BQ14DG7 1078 aa11.93□□□□□ -0.5
NEDD9-210ENST00000505589 RAB30Q15771 203 aa11.93□□□□□ -0.5
NEDD9-210ENST00000505589 MAMDC4Q6UXC1 1216 aa11.93□□□□□ -0.5
NEDD9-210ENST00000505589 ZNF467Q7Z7K2 595 aaPredicted RBP11.93□□□□□ -0.5
NEDD9-210ENST00000505589 AACSQ86V21 672 aa11.93□□□□□ -0.5
NEDD9-210ENST00000505589 TMEM57Q8N5G2 664 aa11.93□□□□□ -0.5
NEDD9-210ENST00000505589 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.93□□□□□ -0.5
NEDD9-210ENST00000505589 ABHD16BQ9H3Z7 469 aa11.93□□□□□ -0.5
NEDD9-210ENST00000505589 ZNF236Q9UL36 1845 aa11.93□□□□□ -0.5
NEDD9-210ENST00000505589 ROBO3Q96MS0 1386 aa11.92□□□□□ -0.5
NEDD9-210ENST00000505589 CDH23Q9H251 3354 aa11.92□□□□□ -0.5
NEDD9-210ENST00000505589 VWA5AO00534 786 aa11.92□□□□□ -0.5
NEDD9-210ENST00000505589 KCNA10Q16322 511 aa11.92□□□□□ -0.5
NEDD9-210ENST00000505589 AAK1Q2M2I8 961 aa11.92□□□□□ -0.5
NEDD9-210ENST00000505589 ZSCAN25Q6NSZ9 544 aa11.92□□□□□ -0.5
NEDD9-210ENST00000505589 SAMD1Q6SPF0 538 aaPredicted RBP11.92□□□□□ -0.5
NEDD9-210ENST00000505589 SPICE1Q8N0Z3 855 aa11.92□□□□□ -0.5
NEDD9-210ENST00000505589 MIER1Q8N108 512 aa11.92□□□□□ -0.5
NEDD9-210ENST00000505589 PRPF38AQ8NAV1 312 aaKnown RBP11.92□□□□□ -0.5
NEDD9-210ENST00000505589 KLHDC9Q8NEP7 349 aa11.92□□□□□ -0.5
NEDD9-210ENST00000505589 ASB2Q96Q27 587 aa11.92□□□□□ -0.5
NEDD9-210ENST00000505589 TEX13BQ9BXU2 312 aa11.92□□□□□ -0.5
NEDD9-210ENST00000505589 ANTXR1Q9H6X2 564 aa11.92□□□□□ -0.5
NEDD9-210ENST00000505589 THEGQ9P2T0 379 aa11.92□□□□□ -0.5
NEDD9-210ENST00000505589 FBXO40Q9UH90 709 aa11.92□□□□□ -0.5
NEDD9-210ENST00000505589 PPP1R9AQ9ULJ8 1098 aa11.92□□□□□ -0.5
NEDD9-210ENST00000505589 EYSQ5T1H1 3165 aa11.91□□□□□ -0.5
NEDD9-210ENST00000505589 ZNF532Q9HCE3 1301 aa11.91□□□□□ -0.5
NEDD9-210ENST00000505589 LTBP2Q14767 1821 aa11.91□□□□□ -0.5
NEDD9-210ENST00000505589 A0A0U1RQG5 324 aaPredicted RBP11.91□□□□□ -0.5
NEDD9-210ENST00000505589 ARVCFO00192 962 aa11.91□□□□□ -0.5
NEDD9-210ENST00000505589 ZBED4O75132 1171 aa11.91□□□□□ -0.5
NEDD9-210ENST00000505589 ADAMTS4O75173 837 aa11.91□□□□□ -0.5
NEDD9-210ENST00000505589 CABYRO75952 493 aa11.91□□□□□ -0.5
NEDD9-210ENST00000505589 IFIT2P09913 472 aaKnown RBP11.91□□□□□ -0.5
NEDD9-210ENST00000505589 FDX1P10109 184 aa11.91□□□□□ -0.5
NEDD9-210ENST00000505589 MS4A1P11836 297 aa11.91□□□□□ -0.5
NEDD9-210ENST00000505589 PDE6AP16499 860 aa11.91□□□□□ -0.5
NEDD9-210ENST00000505589 ITGB8P26012 769 aa11.91□□□□□ -0.5
NEDD9-210ENST00000505589 CST5P28325 142 aaPredicted RBP11.91□□□□□ -0.5
NEDD9-210ENST00000505589 CDK8P49336 464 aa11.91□□□□□ -0.5
NEDD9-210ENST00000505589 RPUSD2Q8IZ73 545 aaKnown RBP11.91□□□□□ -0.5
NEDD9-210ENST00000505589 SDR42E1Q8WUS8 393 aa11.91□□□□□ -0.5
NEDD9-210ENST00000505589 C1QTNF1Q9BXJ1 281 aa11.91□□□□□ -0.5
NEDD9-210ENST00000505589 SLC28A3Q9HAS3 691 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms