RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 USP40Q9NVE5 1235 aa12.91□□□□□ -0.34
NFKB1-205ENST00000505458 PSME4Q14997 1843 aa12.91□□□□□ -0.34
NFKB1-205ENST00000505458 USP17L3A6NCW0 530 aa12.91□□□□□ -0.34
NFKB1-205ENST00000505458 USP17L4A6NCW7 530 aa12.91□□□□□ -0.34
NFKB1-205ENST00000505458 SLFN14P0C7P3 912 aa12.91□□□□□ -0.34
NFKB1-205ENST00000505458 SLC15A2Q16348 729 aa12.91□□□□□ -0.34
NFKB1-205ENST00000505458 DPCR1Q3MIW9 517 aa12.91□□□□□ -0.34
NFKB1-205ENST00000505458 USP17L1Q7RTZ2 530 aa12.91□□□□□ -0.34
NFKB1-205ENST00000505458 FBXW7Q969H0 707 aa12.91□□□□□ -0.34
NFKB1-205ENST00000505458 UBE2Q2LH0YL09 131 aa12.9□□□□□ -0.34
NFKB1-205ENST00000505458 HOXA7P31268 230 aaPredicted RBP12.9□□□□□ -0.34
NFKB1-205ENST00000505458 GPATCH4Q5T3I0 446 aaKnown RBP12.9□□□□□ -0.34
NFKB1-205ENST00000505458 METTL16Q86W50 562 aaKnown RBP12.9□□□□□ -0.34
NFKB1-205ENST00000505458 IQUBQ8NA54 791 aa12.9□□□□□ -0.34
NFKB1-205ENST00000505458 CCDC150Q8NCX0 1101 aa12.9□□□□□ -0.34
NFKB1-205ENST00000505458 SERPINA10Q9UK55 444 aa12.9□□□□□ -0.34
NFKB1-205ENST00000505458 IGKV6D-41A0A0C4DH26 115 aa12.9□□□□□ -0.34
NFKB1-205ENST00000505458 AP5Z1O43299 807 aa12.9□□□□□ -0.34
NFKB1-205ENST00000505458 ERCC5P28715 1186 aaPredicted RBP12.9□□□□□ -0.34
NFKB1-205ENST00000505458 NAP1L4Q99733 375 aaKnown RBP12.9□□□□□ -0.34
NFKB1-205ENST00000505458 ZMYND12Q9H0C1 365 aa12.9□□□□□ -0.34
NFKB1-205ENST00000505458 CSRNP2Q9H175 543 aa12.9□□□□□ -0.34
NFKB1-205ENST00000505458 SYNPO2Q9UMS6 1093 aa12.9□□□□□ -0.34
NFKB1-205ENST00000505458 TTLL1O95922 423 aa12.9□□□□□ -0.34
NFKB1-205ENST00000505458 LONRF3Q496Y0 759 aa12.9□□□□□ -0.34
NFKB1-205ENST00000505458 GSDMAQ96QA5 445 aa12.9□□□□□ -0.34
NFKB1-205ENST00000505458 IDI2Q9BXS1 227 aa12.9□□□□□ -0.34
NFKB1-205ENST00000505458 MTMR4Q9NYA4 1195 aa12.9□□□□□ -0.34
NFKB1-205ENST00000505458 POLR2DO15514 142 aaKnown RBP12.89□□□□□ -0.35
NFKB1-205ENST00000505458 MCTP2Q6DN12 878 aa12.89□□□□□ -0.35
NFKB1-205ENST00000505458 AK8Q96MA6 479 aa12.89□□□□□ -0.35
NFKB1-205ENST00000505458 CUEDC2Q9H467 287 aa12.89□□□□□ -0.35
NFKB1-205ENST00000505458 RMND1Q9NWS8 449 aa12.89□□□□□ -0.35
NFKB1-205ENST00000505458 STXBP3O00186 592 aa12.89□□□□□ -0.35
NFKB1-205ENST00000505458 ACTN4O43707 911 aaKnown RBP12.89□□□□□ -0.35
NFKB1-205ENST00000505458 CRKP46108 304 aa12.89□□□□□ -0.35
NFKB1-205ENST00000505458 MDM2Q00987 491 aaPredicted RBP12.89□□□□□ -0.35
NFKB1-205ENST00000505458 PIK3AP1Q6ZUJ8 805 aa12.89□□□□□ -0.35
NFKB1-205ENST00000505458 SPATA20Q8TB22 786 aa12.89□□□□□ -0.35
NFKB1-205ENST00000505458 SNHG28P0DPA3 235 aa12.89□□□□□ -0.35
NFKB1-205ENST00000505458 SARSP49591 514 aaKnown RBP12.89□□□□□ -0.35
NFKB1-205ENST00000505458 CERS5Q8N5B7 392 aa12.89□□□□□ -0.35
NFKB1-205ENST00000505458 SLC44A5Q8NCS7 719 aa12.89□□□□□ -0.35
NFKB1-205ENST00000505458 CEP95Q96GE4 821 aa12.89□□□□□ -0.35
NFKB1-205ENST00000505458 RIOX1Q9H6W3 641 aa12.89□□□□□ -0.35
NFKB1-205ENST00000505458 PTGDRQ13258 359 aa12.88□□□□□ -0.35
NFKB1-205ENST00000505458 HEATR3Q7Z4Q2 680 aa12.88□□□□□ -0.35
NFKB1-205ENST00000505458 KIAA1524Q8TCG1 905 aa12.88□□□□□ -0.35
NFKB1-205ENST00000505458 SLC16A10Q8TF71 515 aa12.88□□□□□ -0.35
NFKB1-205ENST00000505458 PCDHA5Q9Y5H7 936 aa12.88□□□□□ -0.35
NFKB1-205ENST00000505458 M0R2N6 131 aa12.88□□□□□ -0.35
NFKB1-205ENST00000505458 NAPAP54920 295 aa12.88□□□□□ -0.35
NFKB1-205ENST00000505458 PNOCQ13519 176 aa12.88□□□□□ -0.35
NFKB1-205ENST00000505458 NOLC1Q14978 699 aaKnown RBP eCLIP12.88□□□□□ -0.35
NFKB1-205ENST00000505458 WWC2Q6AWC2 1192 aa12.88□□□□□ -0.35
NFKB1-205ENST00000505458 SHISA4Q96DD7 197 aa12.88□□□□□ -0.35
NFKB1-205ENST00000505458 TRIM34Q9BYJ4 488 aa12.88□□□□□ -0.35
NFKB1-205ENST00000505458 SERTAD1Q9UHV2 236 aa12.88□□□□□ -0.35
NFKB1-205ENST00000505458 ZNF646O15015 1829 aaPredicted RBP12.88□□□□□ -0.35
NFKB1-205ENST00000505458 MMP14P50281 582 aa12.88□□□□□ -0.35
NFKB1-205ENST00000505458 MORC3Q14149 939 aa12.88□□□□□ -0.35
NFKB1-205ENST00000505458 NONOQ15233 471 aaKnown RBP eCLIP12.88□□□□□ -0.35
NFKB1-205ENST00000505458 CDC42EP5Q6NZY7 148 aa12.88□□□□□ -0.35
NFKB1-205ENST00000505458 SH3RF1Q7Z6J0 888 aa12.88□□□□□ -0.35
NFKB1-205ENST00000505458 FOXP4Q8IVH2 680 aaPredicted RBP12.88□□□□□ -0.35
NFKB1-205ENST00000505458 SPC24Q8NBT2 197 aa12.88□□□□□ -0.35
NFKB1-205ENST00000505458 ENOX1Q8TC92 643 aaKnown RBP12.88□□□□□ -0.35
NFKB1-205ENST00000505458 ENTPD3O75355 529 aa12.87□□□□□ -0.35
NFKB1-205ENST00000505458 ATP2B1P20020 1258 aa12.87□□□□□ -0.35
NFKB1-205ENST00000505458 STAG2Q8N3U4 1231 aa12.87□□□□□ -0.35
NFKB1-205ENST00000505458 PRIMPOLQ96LW4 560 aa12.87□□□□□ -0.35
NFKB1-205ENST00000505458 ECE2O60344 883 aa12.87□□□□□ -0.35
NFKB1-205ENST00000505458 KCNJ6P48051 423 aa12.87□□□□□ -0.35
NFKB1-205ENST00000505458 EVX2Q03828 476 aa12.87□□□□□ -0.35
NFKB1-205ENST00000505458 DACT2Q5SW24 774 aa12.87□□□□□ -0.35
NFKB1-205ENST00000505458 CCDC186Q7Z3E2 898 aa12.87□□□□□ -0.35
NFKB1-205ENST00000505458 RTKN2Q8IZC4 609 aa12.87□□□□□ -0.35
NFKB1-205ENST00000505458 SYMPKQ92797 1274 aaKnown RBP12.87□□□□□ -0.35
NFKB1-205ENST00000505458 NAP1L5Q96NT1 182 aaPredicted RBP12.87□□□□□ -0.35
NFKB1-205ENST00000505458 PI4KBQ9UBF8 816 aa12.87□□□□□ -0.35
NFKB1-205ENST00000505458 SLX4Q8IY92 1834 aa12.87□□□□□ -0.35
NFKB1-205ENST00000505458 TRAF1Q13077 416 aa12.87□□□□□ -0.35
NFKB1-205ENST00000505458 PICALMQ13492 652 aa12.87□□□□□ -0.35
NFKB1-205ENST00000505458 ZNF174Q15697 407 aa12.87□□□□□ -0.35
NFKB1-205ENST00000505458 APOBEC3HQ6NTF7 200 aaKnown RBP12.87□□□□□ -0.35
NFKB1-205ENST00000505458 DTHD1Q6ZMT9 781 aa12.87□□□□□ -0.35
NFKB1-205ENST00000505458 TTC12Q9H892 705 aaPredicted RBP12.87□□□□□ -0.35
NFKB1-205ENST00000505458 PDHBP11177 359 aa12.86□□□□□ -0.35
NFKB1-205ENST00000505458 PPP1R2P41236 205 aa12.86□□□□□ -0.35
NFKB1-205ENST00000505458 DCAF4Q8WV16 495 aa12.86□□□□□ -0.35
NFKB1-205ENST00000505458 CAMKK2Q96RR4 588 aa12.86□□□□□ -0.35
NFKB1-205ENST00000505458 MAN1B1Q9UKM7 699 aa12.86□□□□□ -0.35
NFKB1-205ENST00000505458 PCDHA6Q9UN73 950 aa12.86□□□□□ -0.35
NFKB1-205ENST00000505458 PCDHA8Q9Y5H6 950 aa12.86□□□□□ -0.35
NFKB1-205ENST00000505458 hCG_1642624A0A1W2PR95 340 aa12.86□□□□□ -0.35
NFKB1-205ENST00000505458 BIN1O00499 593 aa12.86□□□□□ -0.35
NFKB1-205ENST00000505458 CCP110O43303 1012 aa12.86□□□□□ -0.35
NFKB1-205ENST00000505458 SLC26A4O43511 780 aa12.86□□□□□ -0.35
NFKB1-205ENST00000505458 GTPBP6O43824 516 aaPredicted RBP12.86□□□□□ -0.35
NFKB1-205ENST00000505458 NCAPHQ15003 741 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms