RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 CHMP4BP1P59074 171 aa18.12■□□□□ 0.49
DDX41-205ENST00000505081 ST5P78524 1137 aa18.12■□□□□ 0.49
DDX41-205ENST00000505081 DDB1Q16531 1140 aa18.12■□□□□ 0.49
DDX41-205ENST00000505081 RASGRP2Q7LDG7 609 aa18.12■□□□□ 0.49
DDX41-205ENST00000505081 SLC51AQ86UW1 340 aa18.12■□□□□ 0.49
DDX41-205ENST00000505081 NELFBQ8WX92 580 aa18.12■□□□□ 0.49
DDX41-205ENST00000505081 CTAGE1Q96RT6 745 aa18.12■□□□□ 0.49
DDX41-205ENST00000505081 TRIM49BA6NDI0 452 aa18.12■□□□□ 0.49
DDX41-205ENST00000505081 BMP15O95972 392 aa18.12■□□□□ 0.49
DDX41-205ENST00000505081 CALM1P0DP23 149 aa18.12■□□□□ 0.49
DDX41-205ENST00000505081 CALM2P0DP24 149 aa18.12■□□□□ 0.49
DDX41-205ENST00000505081 CALM3P0DP25 149 aa18.12■□□□□ 0.49
DDX41-205ENST00000505081 KIF4BQ2VIQ3 1234 aa18.12■□□□□ 0.49
DDX41-205ENST00000505081 ARFGAP3Q9NP61 516 aa18.12■□□□□ 0.49
DDX41-205ENST00000505081 ADAMTS2O95450 1211 aa18.11■□□□□ 0.49
DDX41-205ENST00000505081 TXLNAP40222 546 aa18.11■□□□□ 0.49
DDX41-205ENST00000505081 COPB1P53618 953 aaKnown RBP18.11■□□□□ 0.49
DDX41-205ENST00000505081 NUP88Q99567 741 aaPredicted RBP18.11■□□□□ 0.49
DDX41-205ENST00000505081 FUT8Q9BYC5 575 aa18.11■□□□□ 0.49
DDX41-205ENST00000505081 BSDC1Q9NW68 430 aaPredicted RBP18.11■□□□□ 0.49
DDX41-205ENST00000505081 CYP2C19P33261 490 aa18.11■□□□□ 0.49
DDX41-205ENST00000505081 SMC1AQ14683 1233 aaKnown RBP18.11■□□□□ 0.49
DDX41-205ENST00000505081 SRGAP1Q7Z6B7 1085 aa18.11■□□□□ 0.49
DDX41-205ENST00000505081 SLF1Q9BQI6 1058 aa18.11■□□□□ 0.49
DDX41-205ENST00000505081 NAA15Q9BXJ9 866 aaKnown RBP18.11■□□□□ 0.49
DDX41-205ENST00000505081 TSPY2A6NKD2 308 aa18.1■□□□□ 0.49
DDX41-205ENST00000505081 PRCPP42785 496 aa18.1■□□□□ 0.49
DDX41-205ENST00000505081 PAK1Q13153 545 aa18.1■□□□□ 0.49
DDX41-205ENST00000505081 CNGA4Q8IV77 575 aa18.1■□□□□ 0.49
DDX41-205ENST00000505081 STAG2Q8N3U4 1231 aa18.1■□□□□ 0.49
DDX41-205ENST00000505081 UBXN6Q9BZV1 441 aa18.1■□□□□ 0.49
DDX41-205ENST00000505081 ANKZF1Q9H8Y5 726 aa18.1■□□□□ 0.49
DDX41-205ENST00000505081 ABHD10Q9NUJ1 306 aa18.1■□□□□ 0.49
DDX41-205ENST00000505081 LIMA1Q9UHB6 759 aaKnown RBP18.1■□□□□ 0.49
DDX41-205ENST00000505081 KCNJ18B7U540 433 aa18.1■□□□□ 0.49
DDX41-205ENST00000505081 USP17L8P0C7I0 530 aa18.1■□□□□ 0.49
DDX41-205ENST00000505081 KCNJ12Q14500 433 aa18.1■□□□□ 0.49
DDX41-205ENST00000505081 PFKFB3Q16875 520 aaPredicted RBP18.1■□□□□ 0.49
DDX41-205ENST00000505081 CT47A1Q5JQC4 288 aaPredicted RBP18.1■□□□□ 0.49
DDX41-205ENST00000505081 RCSD1Q6JBY9 416 aa18.1■□□□□ 0.49
DDX41-205ENST00000505081 TYW1BQ6NUM6 668 aa18.1■□□□□ 0.49
DDX41-205ENST00000505081 NEK11Q8NG66 645 aa18.1■□□□□ 0.49
DDX41-205ENST00000505081 EEF2KMTQ96G04 330 aa18.1■□□□□ 0.49
DDX41-205ENST00000505081 PNKPQ96T60 521 aa18.1■□□□□ 0.49
DDX41-205ENST00000505081 CHP1Q99653 195 aa18.1■□□□□ 0.49
DDX41-205ENST00000505081 TRIM10Q9UDY6 481 aa18.1■□□□□ 0.49
DDX41-205ENST00000505081 CDC23Q9UJX2 597 aa18.1■□□□□ 0.49
DDX41-205ENST00000505081 TFR2Q9UP52 801 aa18.1■□□□□ 0.49
DDX41-205ENST00000505081 STRCQ7RTU9 1775 aa18.1■□□□□ 0.49
DDX41-205ENST00000505081 GTPBP6O43824 516 aaPredicted RBP18.09■□□□□ 0.49
DDX41-205ENST00000505081 RPN1P04843 607 aaKnown RBP18.09■□□□□ 0.49
DDX41-205ENST00000505081 LONRF2Q1L5Z9 754 aa18.09■□□□□ 0.49
DDX41-205ENST00000505081 TCP11X2Q5H9J9 407 aa18.09■□□□□ 0.49
DDX41-205ENST00000505081 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.09■□□□□ 0.49
DDX41-205ENST00000505081 SEMA3EO15041 775 aa18.09■□□□□ 0.49
DDX41-205ENST00000505081 GTF2E1P29083 439 aaPredicted RBP18.09■□□□□ 0.49
DDX41-205ENST00000505081 PMS1P54277 932 aaKnown RBP18.09■□□□□ 0.49
DDX41-205ENST00000505081 TXNRD3Q86VQ6 643 aa18.09■□□□□ 0.49
DDX41-205ENST00000505081 SUGCTQ9HAC7 445 aa18.09■□□□□ 0.49
DDX41-205ENST00000505081 RWDD2AQ9UIY3 292 aa18.09■□□□□ 0.49
DDX41-205ENST00000505081 C4orf32Q8N8J7 132 aa18.09■□□□□ 0.49
DDX41-205ENST00000505081 DYNLL2Q96FJ2 89 aa18.09■□□□□ 0.49
DDX41-205ENST00000505081 A0A1B0GUL6 1792 aa18.09■□□□□ 0.49
DDX41-205ENST00000505081 ORC4O43929 436 aa18.08■□□□□ 0.49
DDX41-205ENST00000505081 RHOXF2BP0C7M4 288 aa18.08■□□□□ 0.49
DDX41-205ENST00000505081 KRT9P35527 623 aa18.08■□□□□ 0.49
DDX41-205ENST00000505081 ARHGAP25P42331 645 aa18.08■□□□□ 0.49
DDX41-205ENST00000505081 FBXO33Q7Z6M2 555 aa18.08■□□□□ 0.49
DDX41-205ENST00000505081 IRF2BP1Q8IU81 584 aa18.08■□□□□ 0.49
DDX41-205ENST00000505081 RHOXF2Q9BQY4 288 aa18.08■□□□□ 0.49
DDX41-205ENST00000505081 PES1O00541 588 aaKnown RBP18.08■□□□□ 0.48
DDX41-205ENST00000505081 UBXN1Q04323 297 aa18.08■□□□□ 0.48
DDX41-205ENST00000505081 ZNF658Q5TYW1 1059 aaPredicted RBP18.08■□□□□ 0.48
DDX41-205ENST00000505081 CRNKL1Q9BZJ0 848 aaKnown RBP18.08■□□□□ 0.48
DDX41-205ENST00000505081 TMEM60Q9H2L4 133 aa18.08■□□□□ 0.48
DDX41-205ENST00000505081 MCM9Q9NXL9 1143 aa18.08■□□□□ 0.48
DDX41-205ENST00000505081 ITIH6Q6UXX5 1313 aa18.07■□□□□ 0.48
DDX41-205ENST00000505081 LRRC10BA6NIK2 292 aa18.07■□□□□ 0.48
DDX41-205ENST00000505081 H3BQF6 201 aa18.07■□□□□ 0.48
DDX41-205ENST00000505081 STAT6P42226 847 aa18.07■□□□□ 0.48
DDX41-205ENST00000505081 SF3B3Q15393 1217 aaKnown RBP18.07■□□□□ 0.48
DDX41-205ENST00000505081 WWC2Q6AWC2 1192 aa18.07■□□□□ 0.48
DDX41-205ENST00000505081 COL14A1Q05707 1796 aaKnown RBP18.07■□□□□ 0.48
DDX41-205ENST00000505081 CTAGE9A4FU28 777 aa18.07■□□□□ 0.48
DDX41-205ENST00000505081 BLIDQ8IZY5 108 aa18.07■□□□□ 0.48
DDX41-205ENST00000505081 IL17RBQ9NRM6 502 aa18.07■□□□□ 0.48
DDX41-205ENST00000505081 ZNF652Q9Y2D9 606 aa18.07■□□□□ 0.48
DDX41-205ENST00000505081 TFAP4Q01664 338 aa18.06■□□□□ 0.48
DDX41-205ENST00000505081 SLC35G1Q2M3R5 365 aa18.06■□□□□ 0.48
DDX41-205ENST00000505081 NAALADL2Q58DX5 795 aa18.06■□□□□ 0.48
DDX41-205ENST00000505081 TBC1D9BQ66K14 1250 aa18.06■□□□□ 0.48
DDX41-205ENST00000505081 RASSF8Q8NHQ8 419 aa18.06■□□□□ 0.48
DDX41-205ENST00000505081 LRRC15Q8TF66 581 aa18.06■□□□□ 0.48
DDX41-205ENST00000505081 DLEC1Q9Y238 1755 aa18.06■□□□□ 0.48
DDX41-205ENST00000505081 ATP8B1O43520 1251 aa18.06■□□□□ 0.48
DDX41-205ENST00000505081 FECHP22830 423 aa18.06■□□□□ 0.48
DDX41-205ENST00000505081 TMTC1Q8IUR5 882 aa18.06■□□□□ 0.48
DDX41-205ENST00000505081 LINC00116Q8NCU8 138 aa18.06■□□□□ 0.48
DDX41-205ENST00000505081 REXO2Q9Y3B8 237 aaKnown RBP18.06■□□□□ 0.48
DDX41-205ENST00000505081 USP17L3A6NCW0 530 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms