RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 PI4KBQ9UBF8 816 aa15.83■□□□□ 0.12
TCOF1-207ENST00000504761 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.83■□□□□ 0.12
TCOF1-207ENST00000504761 V9GYY5 206 aaPredicted RBP15.83■□□□□ 0.12
TCOF1-207ENST00000504761 FAM193AP78312 1265 aa15.83■□□□□ 0.12
TCOF1-207ENST00000504761 TBC1D8BQ0IIM8 1120 aa15.83■□□□□ 0.12
TCOF1-207ENST00000504761 KRBA2Q6ZNG9 492 aa15.83■□□□□ 0.12
TCOF1-207ENST00000504761 GLT8D2Q9H1C3 349 aa15.83■□□□□ 0.12
TCOF1-207ENST00000504761 FOXP1Q9H334 677 aaPredicted RBP15.83■□□□□ 0.12
TCOF1-207ENST00000504761 PUF60Q9UHX1 559 aaKnown RBP15.83■□□□□ 0.12
TCOF1-207ENST00000504761 PCDHA12Q9UN75 941 aa15.83■□□□□ 0.12
TCOF1-207ENST00000504761 ADGRB2O60241 1585 aa15.83■□□□□ 0.12
TCOF1-207ENST00000504761 SYNRGQ9UMZ2 1314 aa15.82■□□□□ 0.12
TCOF1-207ENST00000504761 ECE2O60344 883 aa15.82■□□□□ 0.12
TCOF1-207ENST00000504761 POLR3EQ9NVU0 708 aa15.82■□□□□ 0.12
TCOF1-207ENST00000504761 TAB2Q9NYJ8 693 aa15.82■□□□□ 0.12
TCOF1-207ENST00000504761 FLOT1O75955 427 aa15.82■□□□□ 0.12
TCOF1-207ENST00000504761 DALRD3Q5D0E6 543 aaKnown RBP15.82■□□□□ 0.12
TCOF1-207ENST00000504761 HAUS3Q68CZ6 603 aa15.82■□□□□ 0.12
TCOF1-207ENST00000504761 KANSL2Q9H9L4 492 aa15.82■□□□□ 0.12
TCOF1-207ENST00000504761 SORBS3O60504 671 aa15.82■□□□□ 0.12
TCOF1-207ENST00000504761 PAK1Q13153 545 aa15.82■□□□□ 0.12
TCOF1-207ENST00000504761 PODNQ7Z5L7 613 aa15.82■□□□□ 0.12
TCOF1-207ENST00000504761 RRAGDQ9NQL2 400 aaPredicted RBP15.82■□□□□ 0.12
TCOF1-207ENST00000504761 TMCO5BA8MYB1 307 aa15.82■□□□□ 0.12
TCOF1-207ENST00000504761 ZBED4O75132 1171 aa15.82■□□□□ 0.12
TCOF1-207ENST00000504761 CASP7P55210 303 aa15.82■□□□□ 0.12
TCOF1-207ENST00000504761 TPH2Q8IWU9 490 aa15.82■□□□□ 0.12
TCOF1-207ENST00000504761 IGSF22Q8N9C0 903 aa15.82■□□□□ 0.12
TCOF1-207ENST00000504761 TMEM47Q9BQJ4 181 aa15.82■□□□□ 0.12
TCOF1-207ENST00000504761 XPO4Q9C0E2 1151 aaKnown RBP15.82■□□□□ 0.12
TCOF1-207ENST00000504761 JADE2Q9NQC1 790 aa15.82■□□□□ 0.12
TCOF1-207ENST00000504761 CNTNAP4Q9C0A0 1308 aa15.81■□□□□ 0.12
TCOF1-207ENST00000504761 OR52Z1P0C646 297 aa15.81■□□□□ 0.12
TCOF1-207ENST00000504761 C3orf67Q6ZVT6 689 aa15.81■□□□□ 0.12
TCOF1-207ENST00000504761 LUC7L2Q9Y383 392 aaKnown RBP15.81■□□□□ 0.12
TCOF1-207ENST00000504761 KRT13P13646 458 aa15.81■□□□□ 0.12
TCOF1-207ENST00000504761 CYP4A11Q02928 519 aa15.81■□□□□ 0.12
TCOF1-207ENST00000504761 PDCL2Q8N4E4 241 aa15.81■□□□□ 0.12
TCOF1-207ENST00000504761 NOC4LQ9BVI4 516 aaKnown RBP15.81■□□□□ 0.12
TCOF1-207ENST00000504761 AXDND1Q5T1B0 1012 aaPredicted RBP15.81■□□□□ 0.12
TCOF1-207ENST00000504761 NAP1L4Q99733 375 aaKnown RBP15.81■□□□□ 0.12
TCOF1-207ENST00000504761 SWAP70Q9UH65 585 aa15.81■□□□□ 0.12
TCOF1-207ENST00000504761 GH2P01242 217 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 DGKHQ86XP1 1220 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 FAM212AQ96EL1 285 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 MPHOSPH6Q99547 160 aaKnown RBP15.8■□□□□ 0.12
TCOF1-207ENST00000504761 PAGR1Q9BTK6 254 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 CENPHQ9H3R5 247 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 SENP2Q9HC62 589 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 MROH7-TTC4A0A0A0MT08 1334 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 PSDA5PKW4 1024 aaPredicted RBP15.8■□□□□ 0.12
TCOF1-207ENST00000504761 ALX1Q15699 326 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 PTPN21Q16825 1174 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 GPATCH4Q5T3I0 446 aaKnown RBP15.8■□□□□ 0.12
TCOF1-207ENST00000504761 DEFB132Q7Z7B7 95 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 TXNRD3Q86VQ6 643 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 SP8Q8IXZ3 490 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 TBCKQ8TEA7 893 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 CEP95Q96GE4 821 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 DNM3Q9UQ16 869 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 PRPF3O43395 683 aaKnown RBP15.8■□□□□ 0.12
TCOF1-207ENST00000504761 EXOSC10Q01780 885 aaKnown RBP15.8■□□□□ 0.12
TCOF1-207ENST00000504761 TSGA10IPQ3SY00 556 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 CNNM4Q6P4Q7 775 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 OXER1Q8TDS5 423 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 PIM2Q9P1W9 311 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 MACROD2A1Z1Q3 448 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 NELFBQ8WX92 580 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 CCDC42Q96M95 316 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 EPB41L4AQ9HCS5 686 aaPredicted RBP15.8■□□□□ 0.12
TCOF1-207ENST00000504761 PCDHA4Q9UN74 947 aa15.8■□□□□ 0.12
TCOF1-207ENST00000504761 CCDC169A6NNP5 214 aa15.79■□□□□ 0.12
TCOF1-207ENST00000504761 HARSP12081 509 aaKnown RBP15.79■□□□□ 0.12
TCOF1-207ENST00000504761 DPCR1Q3MIW9 517 aa15.79■□□□□ 0.12
TCOF1-207ENST00000504761 CIAPIN1Q6FI81 312 aa15.79■□□□□ 0.12
TCOF1-207ENST00000504761 SMYD4Q8IYR2 804 aaPredicted RBP15.79■□□□□ 0.12
TCOF1-207ENST00000504761 AMNQ9BXJ7 453 aa15.79■□□□□ 0.12
TCOF1-207ENST00000504761 FANCLQ9NW38 375 aa15.79■□□□□ 0.12
TCOF1-207ENST00000504761 BCL9O00512 1426 aa15.79■□□□□ 0.12
TCOF1-207ENST00000504761 SALL3Q9BXA9 1300 aa15.79■□□□□ 0.12
TCOF1-207ENST00000504761 RFX7Q2KHR2 1363 aa15.79■□□□□ 0.12
TCOF1-207ENST00000504761 A0A1W2PQ27 194 aa15.79■□□□□ 0.12
TCOF1-207ENST00000504761 A0A1W2PQ64 194 aa15.79■□□□□ 0.12
TCOF1-207ENST00000504761 A0A1W2PQD8 194 aa15.79■□□□□ 0.12
TCOF1-207ENST00000504761 TESPA1A2RU30 521 aaPredicted RBP15.79■□□□□ 0.12
TCOF1-207ENST00000504761 ARHGEF35A5YM69 484 aa15.79■□□□□ 0.12
TCOF1-207ENST00000504761 USP17L5A8MUK1 530 aa15.79■□□□□ 0.12
TCOF1-207ENST00000504761 PRPF4BQ13523 1007 aaKnown RBP15.79■□□□□ 0.12
TCOF1-207ENST00000504761 UBE2SQ16763 222 aa15.79■□□□□ 0.12
TCOF1-207ENST00000504761 ASPRV1Q53RT3 343 aa15.79■□□□□ 0.12
TCOF1-207ENST00000504761 ZBTB9Q96C00 473 aa15.79■□□□□ 0.12
TCOF1-207ENST00000504761 EPSTI1Q96J88 318 aa15.79■□□□□ 0.12
TCOF1-207ENST00000504761 DHX36Q9H2U1 1008 aaKnown RBP15.79■□□□□ 0.12
TCOF1-207ENST00000504761 CYLC1P35663 651 aaPredicted RBP15.79■□□□□ 0.12
TCOF1-207ENST00000504761 TMTC3Q6ZXV5 915 aa15.79■□□□□ 0.12
TCOF1-207ENST00000504761 TICAM2Q86XR7 235 aa15.79■□□□□ 0.12
TCOF1-207ENST00000504761 RTKN2Q8IZC4 609 aa15.79■□□□□ 0.12
TCOF1-207ENST00000504761 DDX25Q9UHL0 483 aaKnown RBP15.79■□□□□ 0.12
TCOF1-207ENST00000504761 GUCA1BQ9UMX6 200 aa15.79■□□□□ 0.12
TCOF1-207ENST00000504761 MRVI1Q9Y6F6 885 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms