RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 THSD7BQ9C0I4 1608 aa15.54■□□□□ 0.08
PDLIM7-212ENST00000504380 WDR19Q8NEZ3 1342 aa15.54■□□□□ 0.08
PDLIM7-212ENST00000504380 GOLGA8HP0CJ92 632 aa15.54■□□□□ 0.08
PDLIM7-212ENST00000504380 CYP2C8P10632 490 aa15.54■□□□□ 0.08
PDLIM7-212ENST00000504380 RXRAP19793 462 aa15.54■□□□□ 0.08
PDLIM7-212ENST00000504380 INHBEP58166 350 aa15.54■□□□□ 0.08
PDLIM7-212ENST00000504380 FGD1P98174 961 aa15.54■□□□□ 0.08
PDLIM7-212ENST00000504380 APOBRQ0VD83 1088 aa15.54■□□□□ 0.08
PDLIM7-212ENST00000504380 CCDC96Q2M329 555 aa15.54■□□□□ 0.08
PDLIM7-212ENST00000504380 TTBK2Q6IQ55 1244 aa15.54■□□□□ 0.08
PDLIM7-212ENST00000504380 BRF1Q92994 677 aa15.54■□□□□ 0.08
PDLIM7-212ENST00000504380 IL17RAQ96F46 866 aa15.54■□□□□ 0.08
PDLIM7-212ENST00000504380 TANGO6Q9C0B7 1094 aa15.54■□□□□ 0.08
PDLIM7-212ENST00000504380 R3HDMLQ9H3Y0 253 aa15.54■□□□□ 0.08
PDLIM7-212ENST00000504380 FBXO28Q9NVF7 368 aa15.54■□□□□ 0.08
PDLIM7-212ENST00000504380 NAP1L2Q9ULW6 460 aaPredicted RBP15.54■□□□□ 0.08
PDLIM7-212ENST00000504380 CCDC69A6NI79 296 aa15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 USP17L15C9J2P7 530 aa15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 USP17L13C9JLJ4 530 aa15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 USP17L11C9JVI0 530 aa15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 USP17L18D6R9N7 530 aa15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 USP17L22D6RA61 530 aa15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 USP17L17D6RBQ6 530 aa15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 USP17L19D6RCP7 530 aa15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 USP17L20D6RJB6 530 aa15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 WDR46O15213 610 aaKnown RBP15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 PEX10O60683 326 aa15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 TRPA1O75762 1119 aa15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 PDHBP11177 359 aa15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 BMP3P12645 472 aa15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 SLC1A4P43007 532 aa15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 NEK4P51957 841 aa15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 USP17L24Q0WX57 530 aa15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 TOB2Q14106 344 aaPredicted RBP15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 CATSPERGQ6ZRH7 1159 aa15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 NOL8Q76FK4 1167 aaKnown RBP15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 CCDC144CPQ8IYA2 1237 aa15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 ZNF654Q8IZM8 581 aa15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 NUP133Q8WUM0 1156 aa15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 LPAR1Q92633 364 aa15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 P2RX7Q99572 595 aaKnown RBP15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 ASCC2Q9H1I8 757 aaPredicted RBP15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 RNF186Q9NXI6 227 aa15.53■□□□□ 0.08
PDLIM7-212ENST00000504380 TMEM232C9JQI7 657 aa15.52■□□□□ 0.08
PDLIM7-212ENST00000504380 TBC1D8O95759 1140 aa15.52■□□□□ 0.08
PDLIM7-212ENST00000504380 OSBPP22059 807 aa15.52■□□□□ 0.08
PDLIM7-212ENST00000504380 SLC16A2P36021 539 aa15.52■□□□□ 0.08
PDLIM7-212ENST00000504380 LIFRP42702 1097 aa15.52■□□□□ 0.08
PDLIM7-212ENST00000504380 TAF1CQ15572 869 aaPredicted RBP15.52■□□□□ 0.08
PDLIM7-212ENST00000504380 STAG2Q8N3U4 1231 aa15.52■□□□□ 0.08
PDLIM7-212ENST00000504380 GMCL1Q96IK5 515 aa15.52■□□□□ 0.08
PDLIM7-212ENST00000504380 MTA3Q9BTC8 594 aa15.52■□□□□ 0.08
PDLIM7-212ENST00000504380 CPVLQ9H3G5 476 aa15.52■□□□□ 0.08
PDLIM7-212ENST00000504380 TSKSQ9UJT2 592 aa15.52■□□□□ 0.08
PDLIM7-212ENST00000504380 SYNPO2Q9UMS6 1093 aa15.52■□□□□ 0.08
PDLIM7-212ENST00000504380 KLF18A0A0U1RQI7 1052 aa15.51■□□□□ 0.07
PDLIM7-212ENST00000504380 FLOT1O75955 427 aa15.51■□□□□ 0.07
PDLIM7-212ENST00000504380 HOXA7P31268 230 aaPredicted RBP15.51■□□□□ 0.07
PDLIM7-212ENST00000504380 AK2P54819 239 aa15.51■□□□□ 0.07
PDLIM7-212ENST00000504380 SNAP25P60880 206 aa15.51■□□□□ 0.07
PDLIM7-212ENST00000504380 IRX3P78415 501 aaPredicted RBP15.51■□□□□ 0.07
PDLIM7-212ENST00000504380 CRHR2Q13324 411 aa15.51■□□□□ 0.07
PDLIM7-212ENST00000504380 OTUD7BQ6GQQ9 843 aa15.51■□□□□ 0.07
PDLIM7-212ENST00000504380 POTEEQ6S8J3 1075 aa15.51■□□□□ 0.07
PDLIM7-212ENST00000504380 CATIPQ7Z7H3 387 aa15.51■□□□□ 0.07
PDLIM7-212ENST00000504380 REM2Q8IYK8 340 aaPredicted RBP15.51■□□□□ 0.07
PDLIM7-212ENST00000504380 TMTC2Q8N394 836 aa15.51■□□□□ 0.07
PDLIM7-212ENST00000504380 DCAF4Q8WV16 495 aa15.51■□□□□ 0.07
PDLIM7-212ENST00000504380 UBA5Q9GZZ9 404 aa15.51■□□□□ 0.07
PDLIM7-212ENST00000504380 SLC12A7Q9Y666 1083 aa15.51■□□□□ 0.07
PDLIM7-212ENST00000504380 SNHG28P0DPA3 235 aa15.5■□□□□ 0.07
PDLIM7-212ENST00000504380 ZNF543Q08ER8 600 aa15.5■□□□□ 0.07
PDLIM7-212ENST00000504380 TROAPQ12815 778 aa15.5■□□□□ 0.07
PDLIM7-212ENST00000504380 IKQ13123 557 aaPredicted RBP15.5■□□□□ 0.07
PDLIM7-212ENST00000504380 PABPC4Q13310 644 aaKnown RBP eCLIP15.5■□□□□ 0.073e-6■□□□□ 9
PDLIM7-212ENST00000504380 SGMS1Q86VZ5 419 aa15.5■□□□□ 0.07
PDLIM7-212ENST00000504380 MICU3Q86XE3 530 aa15.5■□□□□ 0.07
PDLIM7-212ENST00000504380 KIFC2Q96AC6 838 aa15.5■□□□□ 0.07
PDLIM7-212ENST00000504380 ATG4CQ96DT6 458 aa15.5■□□□□ 0.07
PDLIM7-212ENST00000504380 AGXT2Q9BYV1 514 aa15.5■□□□□ 0.07
PDLIM7-212ENST00000504380 CPA4Q9UI42 421 aa15.5■□□□□ 0.07
PDLIM7-212ENST00000504380 RLFQ13129 1914 aa15.49■□□□□ 0.07
PDLIM7-212ENST00000504380 SPDYE16A6NNV3 312 aaPredicted RBP15.49■□□□□ 0.07
PDLIM7-212ENST00000504380 ECM2O94769 699 aaPredicted RBP15.49■□□□□ 0.07
PDLIM7-212ENST00000504380 PARP1P09874 1014 aaKnown RBP15.49■□□□□ 0.07
PDLIM7-212ENST00000504380 DSG3P32926 999 aa15.49■□□□□ 0.07
PDLIM7-212ENST00000504380 HERVK_113P62684 666 aa15.49■□□□□ 0.07
PDLIM7-212ENST00000504380 COG2Q14746 738 aa15.49■□□□□ 0.07
PDLIM7-212ENST00000504380 GRM4Q14833 912 aa15.49■□□□□ 0.07
PDLIM7-212ENST00000504380 APOA5Q6Q788 366 aa15.49■□□□□ 0.07
PDLIM7-212ENST00000504380 MAD2L2Q9UI95 211 aa15.49■□□□□ 0.07
PDLIM7-212ENST00000504380 SLC45A1Q9Y2W3 748 aa15.49■□□□□ 0.07
PDLIM7-212ENST00000504380 ZBTB43O43298 467 aa15.48■□□□□ 0.07
PDLIM7-212ENST00000504380 CA12O43570 354 aa15.48■□□□□ 0.07
PDLIM7-212ENST00000504380 DDAH1O94760 285 aa15.48■□□□□ 0.07
PDLIM7-212ENST00000504380 STK3Q13188 491 aa15.48■□□□□ 0.07
PDLIM7-212ENST00000504380 SLC35G1Q2M3R5 365 aa15.48■□□□□ 0.07
PDLIM7-212ENST00000504380 SYNE3Q6ZMZ3 975 aa15.48■□□□□ 0.07
PDLIM7-212ENST00000504380 CMTR1Q8N1G2 835 aaKnown RBP15.48■□□□□ 0.07
PDLIM7-212ENST00000504380 SMCR8Q8TEV9 937 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms