RNA–Protein interactions for RNA: ENST00000504263.1

PCAT4-201, prostate cancer associated transcript 4, humanhuman

TSL 1 (best) BASIC

Gene PCAT4, Length 2,091 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT4-201ENST00000504263 PENKP01210 267 aaPredicted RBP3.96□□□□□ -1.77
PCAT4-201ENST00000504263 PROCP04070 461 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 MYL1P05976 194 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 PDCP20941 246 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 CCNG1P51959 295 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 NAP1L1P55209 391 aaKnown RBP3.96□□□□□ -1.77
PCAT4-201ENST00000504263 DNM1Q05193 864 aaKnown RBP3.96□□□□□ -1.77
PCAT4-201ENST00000504263 PABPC4Q13310 644 aaKnown RBP eCLIP3.96□□□□□ -1.77
PCAT4-201ENST00000504263 DYNC1I2Q13409 638 aaKnown RBP3.96□□□□□ -1.77
PCAT4-201ENST00000504263 XRCC4Q13426 336 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 GNL2Q13823 731 aaKnown RBP3.96□□□□□ -1.77
PCAT4-201ENST00000504263 BLMHQ13867 455 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 LRRC23Q53EV4 343 aaPredicted RBP3.96□□□□□ -1.77
PCAT4-201ENST00000504263 RRP12Q5JTH9 1297 aaKnown RBP3.96□□□□□ -1.77
PCAT4-201ENST00000504263 ZNF385CQ66K41 422 aaPredicted RBP3.96□□□□□ -1.77
PCAT4-201ENST00000504263 NUGGCQ68CJ6 796 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 CYB5D1Q6P9G0 228 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 C6orf89Q6UWU4 347 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 TTC6Q86TZ1 520 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 FAM228AQ86W67 206 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 DHX40Q8IX18 779 aaKnown RBP3.96□□□□□ -1.77
PCAT4-201ENST00000504263 FUKQ8N0W3 1084 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 TEX9Q8N6V9 391 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 IGSF22Q8N9C0 903 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 C1orf131Q8NDD1 294 aaKnown RBP3.96□□□□□ -1.77
PCAT4-201ENST00000504263 ACRBPQ8NEB7 543 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 PIK3R5Q8WYR1 880 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 CCDC102AQ96A19 550 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 MRGPRX2Q96LB1 330 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 ZSCAN31Q96LW9 406 aaPredicted RBP3.96□□□□□ -1.77
PCAT4-201ENST00000504263 JAKMIP1Q96N16 626 aaKnown RBP3.96□□□□□ -1.77
PCAT4-201ENST00000504263 TTC14Q96N46 770 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 GORASP1Q9BQQ3 440 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 ESYT1Q9BSJ8 1104 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 CAPS2Q9BXY5 557 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 DNAJC25Q9H1X3 360 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 SLC40A1Q9NP59 571 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 SH2B1Q9NRF2 756 aaPredicted RBP3.96□□□□□ -1.77
PCAT4-201ENST00000504263 PAPOLBQ9NRJ5 636 aaKnown RBP3.96□□□□□ -1.77
PCAT4-201ENST00000504263 DACT1Q9NYF0 836 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 CDC23Q9UJX2 597 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 LIMCH1Q9UPQ0 1083 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 WDR37Q9Y2I8 494 aa3.96□□□□□ -1.77
PCAT4-201ENST00000504263 GLI3P10071 1580 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 TARSL2A2RTX5 802 aaKnown RBP3.96□□□□□ -1.78
PCAT4-201ENST00000504263 BECN2A8MW95 431 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 GOLGA8KD6RF30 607 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 E2F6O75461 281 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 NPTXRO95502 500 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 CNGA1P29973 690 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 HSPA4P34932 840 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 CUL3Q13618 768 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 MFSD10Q14728 455 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 WHAMMP3Q1A5X7 153 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 TSNAXIP1Q2TAA8 658 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 LACTB2Q53H82 288 aaPredicted RBP3.96□□□□□ -1.78
PCAT4-201ENST00000504263 CMPK2Q5EBM0 449 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 KLHL10Q6JEL2 608 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 PRPF40BQ6NWY9 871 aaKnown RBP3.96□□□□□ -1.78
PCAT4-201ENST00000504263 RPAP2Q8IXW5 612 aaPredicted RBP3.96□□□□□ -1.78
PCAT4-201ENST00000504263 CCDC13Q8IYE1 715 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 CEP57L1Q8IYX8 460 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 GBP7Q8N8V2 638 aaPredicted RBP3.96□□□□□ -1.78
PCAT4-201ENST00000504263 KCNH5Q8NCM2 988 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 DDX12PQ92771 950 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 CUL5Q93034 780 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 CNKSR1Q969H4 720 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 KAT14Q9H8E8 782 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 ABCF2Q9UG63 623 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 HOOK1Q9UJC3 728 aaKnown RBP3.96□□□□□ -1.78
PCAT4-201ENST00000504263 HPCAL4Q9UM19 191 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 FCF1Q9Y324 198 aaKnown RBP3.96□□□□□ -1.78
PCAT4-201ENST00000504263 SPATA31A1Q5TZJ5 1347 aa3.96□□□□□ -1.78
PCAT4-201ENST00000504263 CPDO75976 1380 aa3.95□□□□□ -1.78
PCAT4-201ENST00000504263 NSD2O96028 1365 aa3.95□□□□□ -1.78
PCAT4-201ENST00000504263 SBNO2Q9Y2G9 1366 aa3.95□□□□□ -1.78
PCAT4-201ENST00000504263 KDM6AO15550 1401 aaPredicted RBP3.95□□□□□ -1.78
PCAT4-201ENST00000504263 USP6P35125 1406 aa3.95□□□□□ -1.78
PCAT4-201ENST00000504263 CRYBG1Q9Y4K1 1723 aa3.95□□□□□ -1.78
PCAT4-201ENST00000504263 LRRIQ3A6PVS8 624 aaPredicted RBP3.95□□□□□ -1.78
PCAT4-201ENST00000504263 STX10O60499 249 aa3.95□□□□□ -1.78
PCAT4-201ENST00000504263 DNAJC8O75937 253 aaPredicted RBP3.95□□□□□ -1.78
PCAT4-201ENST00000504263 ARHGEF15O94989 841 aa3.95□□□□□ -1.78
PCAT4-201ENST00000504263 VIMP08670 466 aaKnown RBP3.95□□□□□ -1.78
PCAT4-201ENST00000504263 GHRP10912 638 aa3.95□□□□□ -1.78
PCAT4-201ENST00000504263 KRT76Q01546 638 aa3.95□□□□□ -1.78
PCAT4-201ENST00000504263 EXOSC9Q06265 439 aaKnown RBP3.95□□□□□ -1.78
PCAT4-201ENST00000504263 SLC4A8Q2Y0W8 1093 aa3.95□□□□□ -1.78
PCAT4-201ENST00000504263 THEMIS2Q5TEJ8 643 aa3.95□□□□□ -1.78
PCAT4-201ENST00000504263 CCDC80Q76M96 950 aa3.95□□□□□ -1.78
PCAT4-201ENST00000504263 UBE3BQ7Z3V4 1068 aa3.95□□□□□ -1.78
PCAT4-201ENST00000504263 HDGFL2Q7Z4V5 671 aaPredicted RBP3.95□□□□□ -1.78
PCAT4-201ENST00000504263 SESTD1Q86VW0 696 aa3.95□□□□□ -1.78
PCAT4-201ENST00000504263 CCAR1Q8IX12 1150 aaKnown RBP3.95□□□□□ -1.78
PCAT4-201ENST00000504263 SAMD3Q8N6K7 520 aa3.95□□□□□ -1.78
PCAT4-201ENST00000504263 ANKRD44Q8N8A2 993 aa3.95□□□□□ -1.78
PCAT4-201ENST00000504263 PROCA1Q8NCQ7 364 aaPredicted RBP3.95□□□□□ -1.78
PCAT4-201ENST00000504263 HELBQ8NG08 1087 aaPredicted RBP3.95□□□□□ -1.78
PCAT4-201ENST00000504263 SMARCC2Q8TAQ2 1214 aa3.95□□□□□ -1.78
PCAT4-201ENST00000504263 COG1Q8WTW3 980 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms