RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 MFSD4AQ8N468 514 aa7.29□□□□□ -1.24
TRAPPC13-205ENST00000504243 DNAJB8Q8NHS0 232 aa7.29□□□□□ -1.24
TRAPPC13-205ENST00000504243 HRASLS5Q96KN8 279 aa7.29□□□□□ -1.24
TRAPPC13-205ENST00000504243 PLAGL2Q9UPG8 496 aa7.29□□□□□ -1.24
TRAPPC13-205ENST00000504243 MSRB2Q9Y3D2 182 aa7.29□□□□□ -1.24
TRAPPC13-205ENST00000504243 MRPL42Q9Y6G3 142 aaKnown RBP7.29□□□□□ -1.24
TRAPPC13-205ENST00000504243 FAM155AB1AL88 458 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC13-205ENST00000504243 RASGRF1Q13972 1273 aa7.28□□□□□ -1.24
TRAPPC13-205ENST00000504243 SV2CQ496J9 727 aa7.28□□□□□ -1.24
TRAPPC13-205ENST00000504243 HEATR6Q6AI08 1181 aaKnown RBP7.28□□□□□ -1.24
TRAPPC13-205ENST00000504243 ADAT2Q7Z6V5 191 aaKnown RBP7.28□□□□□ -1.24
TRAPPC13-205ENST00000504243 PPP1R13LQ8WUF5 828 aa7.28□□□□□ -1.24
TRAPPC13-205ENST00000504243 BCL7CQ8WUZ0 217 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC13-205ENST00000504243 U3KQE9 123 aa7.28□□□□□ -1.24
TRAPPC13-205ENST00000504243 CBX7O95931 251 aa7.27□□□□□ -1.25
TRAPPC13-205ENST00000504243 NAT2P11245 290 aa7.27□□□□□ -1.25
TRAPPC13-205ENST00000504243 GP2P55259 537 aaKnown RBP7.27□□□□□ -1.25
TRAPPC13-205ENST00000504243 RNF4P78317 190 aa7.27□□□□□ -1.25
TRAPPC13-205ENST00000504243 AOC3Q16853 763 aa7.27□□□□□ -1.25
TRAPPC13-205ENST00000504243 NKPD1Q17RQ9 610 aa7.27□□□□□ -1.25
TRAPPC13-205ENST00000504243 SDE2Q6IQ49 451 aa7.27□□□□□ -1.25
TRAPPC13-205ENST00000504243 PPFIBP1Q86W92 1011 aa7.27□□□□□ -1.25
TRAPPC13-205ENST00000504243 SPACA3Q8IXA5 215 aa7.27□□□□□ -1.25
TRAPPC13-205ENST00000504243 AGBL5Q8NDL9 886 aa7.27□□□□□ -1.25
TRAPPC13-205ENST00000504243 FLCNQ8NFG4 579 aa7.27□□□□□ -1.25
TRAPPC13-205ENST00000504243 PIWIL2Q8TC59 973 aaKnown RBP7.27□□□□□ -1.25
TRAPPC13-205ENST00000504243 ASB11Q8WXH4 323 aa7.27□□□□□ -1.25
TRAPPC13-205ENST00000504243 KREMEN1Q96MU8 473 aa7.27□□□□□ -1.25
TRAPPC13-205ENST00000504243 LRP2BPQ9P2M1 347 aa7.27□□□□□ -1.25
TRAPPC13-205ENST00000504243 FBXL21Q9UKT6 434 aa7.27□□□□□ -1.25
TRAPPC13-205ENST00000504243 CAPN6Q9Y6Q1 641 aa7.27□□□□□ -1.25
TRAPPC13-205ENST00000504243 CNTNAP4Q9C0A0 1308 aa7.27□□□□□ -1.25
TRAPPC13-205ENST00000504243 LOC100996750A0A140TA64 210 aa7.26□□□□□ -1.25
TRAPPC13-205ENST00000504243 C9IYK1 514 aa7.26□□□□□ -1.25
TRAPPC13-205ENST00000504243 AGRPO00253 132 aa7.26□□□□□ -1.25
TRAPPC13-205ENST00000504243 CLSTN1O94985 981 aa7.26□□□□□ -1.25
TRAPPC13-205ENST00000504243 SSRP1Q08945 709 aaKnown RBP7.26□□□□□ -1.25
TRAPPC13-205ENST00000504243 TCEAL1Q15170 157 aa7.26□□□□□ -1.25
TRAPPC13-205ENST00000504243 DCAF15Q66K64 600 aa7.26□□□□□ -1.25
TRAPPC13-205ENST00000504243 MRM1Q6IN84 353 aaKnown RBP7.26□□□□□ -1.25
TRAPPC13-205ENST00000504243 JAZF1Q86VZ6 243 aa7.26□□□□□ -1.25
TRAPPC13-205ENST00000504243 RNF141Q8WVD5 230 aa7.26□□□□□ -1.25
TRAPPC13-205ENST00000504243 KLHL6Q8WZ60 621 aa7.26□□□□□ -1.25
TRAPPC13-205ENST00000504243 SMARCC1Q92922 1105 aaPredicted RBP7.26□□□□□ -1.25
TRAPPC13-205ENST00000504243 APBA2Q99767 749 aa7.26□□□□□ -1.25
TRAPPC13-205ENST00000504243 KRTAP4-6Q9BYQ5 205 aa7.26□□□□□ -1.25
TRAPPC13-205ENST00000504243 KCNH3Q9ULD8 1083 aa7.26□□□□□ -1.25
TRAPPC13-205ENST00000504243 SUGT1Q9Y2Z0 365 aa7.26□□□□□ -1.25
TRAPPC13-205ENST00000504243 KDM2BQ8NHM5 1336 aa7.26□□□□□ -1.25
TRAPPC13-205ENST00000504243 PRR33A8MZF0 331 aa7.25□□□□□ -1.25
TRAPPC13-205ENST00000504243 SUSD5O60279 629 aa7.25□□□□□ -1.25
TRAPPC13-205ENST00000504243 ADAMTS4O75173 837 aa7.25□□□□□ -1.25
TRAPPC13-205ENST00000504243 AXDND1Q5T1B0 1012 aaPredicted RBP7.25□□□□□ -1.25
TRAPPC13-205ENST00000504243 NBPF12Q5TAG4 269 aaPredicted RBP7.25□□□□□ -1.25
TRAPPC13-205ENST00000504243 SPATC1Q76KD6 591 aa7.25□□□□□ -1.25
TRAPPC13-205ENST00000504243 TP53INP2Q8IXH6 220 aa7.25□□□□□ -1.25
TRAPPC13-205ENST00000504243 ST13P5Q8NFI4 369 aaPredicted RBP7.25□□□□□ -1.25
TRAPPC13-205ENST00000504243 SH3TC2Q8TF17 1288 aa7.25□□□□□ -1.25
TRAPPC13-205ENST00000504243 FGD4Q96M96 766 aa7.25□□□□□ -1.25
TRAPPC13-205ENST00000504243 HAUS7Q99871 368 aa7.25□□□□□ -1.25
TRAPPC13-205ENST00000504243 ASPNQ9BXN1 380 aa7.25□□□□□ -1.25
TRAPPC13-205ENST00000504243 GBP3Q9H0R5 595 aa7.25□□□□□ -1.25
TRAPPC13-205ENST00000504243 ANKRD34BA5PLL1 514 aa7.24□□□□□ -1.25
TRAPPC13-205ENST00000504243 EPHX1P07099 455 aa7.24□□□□□ -1.25
TRAPPC13-205ENST00000504243 BNIP3Q12983 259 aa7.24□□□□□ -1.25
TRAPPC13-205ENST00000504243 NOL9Q5SY16 702 aaKnown RBP7.24□□□□□ -1.25
TRAPPC13-205ENST00000504243 THAP5Q7Z6K1 395 aa7.24□□□□□ -1.25
TRAPPC13-205ENST00000504243 TBX22Q9Y458 520 aa7.24□□□□□ -1.25
TRAPPC13-205ENST00000504243 IQCA1LA6NCM1 817 aa7.23□□□□□ -1.25
TRAPPC13-205ENST00000504243 CANXP27824 592 aaKnown RBP7.23□□□□□ -1.25
TRAPPC13-205ENST00000504243 TNK2Q07912 1038 aa7.23□□□□□ -1.25
TRAPPC13-205ENST00000504243 AUHQ13825 339 aaKnown RBP7.23□□□□□ -1.25
TRAPPC13-205ENST00000504243 CDKAL1Q5VV42 579 aa7.23□□□□□ -1.25
TRAPPC13-205ENST00000504243 LILRB2Q8N423 598 aa7.23□□□□□ -1.25
TRAPPC13-205ENST00000504243 HSPA12BQ96MM6 686 aa7.23□□□□□ -1.25
TRAPPC13-205ENST00000504243 ASCC2Q9H1I8 757 aaPredicted RBP7.23□□□□□ -1.25
TRAPPC13-205ENST00000504243 PAK6Q9NQU5 681 aaPredicted RBP7.23□□□□□ -1.25
TRAPPC13-205ENST00000504243 ZMYM5Q9UJ78 669 aa7.23□□□□□ -1.25
TRAPPC13-205ENST00000504243 PCDHB12Q9Y5F1 795 aa7.23□□□□□ -1.25
TRAPPC13-205ENST00000504243 ST14Q9Y5Y6 855 aa7.23□□□□□ -1.25
TRAPPC13-205ENST00000504243 PITPNM2Q9BZ72 1349 aa7.23□□□□□ -1.25
TRAPPC13-205ENST00000504243 DIAPH1O60610 1272 aaKnown RBP7.22□□□□□ -1.25
TRAPPC13-205ENST00000504243 LRRN2O75325 713 aa7.22□□□□□ -1.25
TRAPPC13-205ENST00000504243 PPM1BO75688 479 aa7.22□□□□□ -1.25
TRAPPC13-205ENST00000504243 CD8BP10966 210 aa7.22□□□□□ -1.25
TRAPPC13-205ENST00000504243 XP32Q5T750 250 aa7.22□□□□□ -1.25
TRAPPC13-205ENST00000504243 ANGEL2Q5VTE6 544 aaKnown RBP7.22□□□□□ -1.25
TRAPPC13-205ENST00000504243 NFXL1Q6ZNB6 911 aa7.22□□□□□ -1.25
TRAPPC13-205ENST00000504243 SPRED2Q7Z698 418 aa7.22□□□□□ -1.25
TRAPPC13-205ENST00000504243 C7orf61Q8IZ16 206 aa7.22□□□□□ -1.25
TRAPPC13-205ENST00000504243 LRRC47Q8N1G4 583 aaKnown RBP7.22□□□□□ -1.25
TRAPPC13-205ENST00000504243 LRRN4CLQ8ND94 238 aa7.22□□□□□ -1.25
TRAPPC13-205ENST00000504243 ADCY4Q8NFM4 1077 aa7.22□□□□□ -1.25
TRAPPC13-205ENST00000504243 RNPC3Q96LT9 517 aaKnown RBP7.22□□□□□ -1.25
TRAPPC13-205ENST00000504243 Q96M66 194 aa7.22□□□□□ -1.25
TRAPPC13-205ENST00000504243 EPN3Q9H201 632 aa7.22□□□□□ -1.25
TRAPPC13-205ENST00000504243 TRIT1Q9H3H1 467 aaKnown RBP7.22□□□□□ -1.25
TRAPPC13-205ENST00000504243 SEMA3GQ9NS98 782 aa7.22□□□□□ -1.25
TRAPPC13-205ENST00000504243 ZNF451Q9Y4E5 1061 aa7.22□□□□□ -1.25
TRAPPC13-205ENST00000504243 OAS3Q9Y6K5 1087 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms