RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 ADD1P35611 737 aaKnown RBP16.12■□□□□ 0.17
CYSTM1-202ENST00000504227 ZNF543Q08ER8 600 aa16.12■□□□□ 0.17
CYSTM1-202ENST00000504227 SNAPC2Q13487 334 aa16.12■□□□□ 0.17
CYSTM1-202ENST00000504227 SH3D19Q5HYK7 790 aa16.12■□□□□ 0.17
CYSTM1-202ENST00000504227 SPRYD7Q5W111 196 aa16.12■□□□□ 0.17
CYSTM1-202ENST00000504227 RGMBQ6NW40 437 aa16.12■□□□□ 0.17
CYSTM1-202ENST00000504227 CCDC83Q8IWF9 413 aa16.12■□□□□ 0.17
CYSTM1-202ENST00000504227 LZTS2Q9BRK4 669 aa16.12■□□□□ 0.17
CYSTM1-202ENST00000504227 GPCPD1Q9NPB8 672 aa16.12■□□□□ 0.17
CYSTM1-202ENST00000504227 EMILIN3Q9NT22 766 aa16.12■□□□□ 0.17
CYSTM1-202ENST00000504227 MAD2L2Q9UI95 211 aa16.12■□□□□ 0.17
CYSTM1-202ENST00000504227 OTOFQ9HC10 1997 aa16.12■□□□□ 0.17
CYSTM1-202ENST00000504227 NID2Q14112 1375 aa16.12■□□□□ 0.17
CYSTM1-202ENST00000504227 PALM3A6NDB9 673 aaPredicted RBP16.11■□□□□ 0.17
CYSTM1-202ENST00000504227 KLRF2D3W0D1 207 aa16.11■□□□□ 0.17
CYSTM1-202ENST00000504227 WDR46O15213 610 aaKnown RBP16.11■□□□□ 0.17
CYSTM1-202ENST00000504227 CDKL5O76039 1030 aa16.11■□□□□ 0.17
CYSTM1-202ENST00000504227 GOLGA8HP0CJ92 632 aa16.11■□□□□ 0.17
CYSTM1-202ENST00000504227 ZBTB48P10074 688 aaPredicted RBP16.11■□□□□ 0.17
CYSTM1-202ENST00000504227 CDC27P30260 824 aa16.11■□□□□ 0.17
CYSTM1-202ENST00000504227 GJA5P36382 358 aa16.11■□□□□ 0.17
CYSTM1-202ENST00000504227 APLP1P51693 650 aa16.11■□□□□ 0.17
CYSTM1-202ENST00000504227 KIAA1755Q5JYT7 1200 aa16.11■□□□□ 0.17
CYSTM1-202ENST00000504227 KCTD1Q719H9 257 aa16.11■□□□□ 0.17
CYSTM1-202ENST00000504227 FASTKD5Q7L8L6 764 aaKnown RBP16.11■□□□□ 0.17
CYSTM1-202ENST00000504227 CCDC102AQ96A19 550 aa16.11■□□□□ 0.17
CYSTM1-202ENST00000504227 HHIPL1Q96JK4 782 aa16.11■□□□□ 0.17
CYSTM1-202ENST00000504227 C12orf42Q96LP6 360 aa16.11■□□□□ 0.17
CYSTM1-202ENST00000504227 FAM217BQ9NTX9 383 aaPredicted RBP16.11■□□□□ 0.17
CYSTM1-202ENST00000504227 FRMPD2Q68DX3 1309 aaPredicted RBP16.11■□□□□ 0.17
CYSTM1-202ENST00000504227 A0A0G2JLL6 359 aaPredicted RBP16.1■□□□□ 0.17
CYSTM1-202ENST00000504227 TMEM232C9JQI7 657 aa16.1■□□□□ 0.17
CYSTM1-202ENST00000504227 CETPP11597 493 aa16.1■□□□□ 0.17
CYSTM1-202ENST00000504227 GTF2A2P52657 109 aa16.1■□□□□ 0.17
CYSTM1-202ENST00000504227 IKQ13123 557 aaPredicted RBP16.1■□□□□ 0.17
CYSTM1-202ENST00000504227 CUL4AQ13619 759 aa16.1■□□□□ 0.17
CYSTM1-202ENST00000504227 FAM83BQ5T0W9 1011 aa16.1■□□□□ 0.17
CYSTM1-202ENST00000504227 GADL1Q6ZQY3 521 aa16.1■□□□□ 0.17
CYSTM1-202ENST00000504227 TMTC3Q6ZXV5 915 aa16.1■□□□□ 0.17
CYSTM1-202ENST00000504227 PRRT2Q7Z6L0 340 aaPredicted RBP16.1■□□□□ 0.17
CYSTM1-202ENST00000504227 STAG2Q8N3U4 1231 aa16.1■□□□□ 0.17
CYSTM1-202ENST00000504227 NUP88Q99567 741 aaPredicted RBP16.1■□□□□ 0.17
CYSTM1-202ENST00000504227 LLPHQ9BRT6 129 aaKnown RBP16.1■□□□□ 0.17
CYSTM1-202ENST00000504227 CREBZFQ9NS37 354 aa16.1■□□□□ 0.17
CYSTM1-202ENST00000504227 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.1■□□□□ 0.17
CYSTM1-202ENST00000504227 IFNAR1P17181 557 aa16.09■□□□□ 0.17
CYSTM1-202ENST00000504227 VCAM1P19320 739 aa16.09■□□□□ 0.17
CYSTM1-202ENST00000504227 SMARCA1P28370 1054 aa16.09■□□□□ 0.17
CYSTM1-202ENST00000504227 RASGRP2Q7LDG7 609 aa16.09■□□□□ 0.17
CYSTM1-202ENST00000504227 PROCA1Q8NCQ7 364 aaPredicted RBP16.09■□□□□ 0.17
CYSTM1-202ENST00000504227 CHURC1Q8WUH1 139 aa16.09■□□□□ 0.17
CYSTM1-202ENST00000504227 INTS4Q96HW7 963 aaKnown RBP16.09■□□□□ 0.17
CYSTM1-202ENST00000504227 RPAP3Q9H6T3 665 aaPredicted RBP16.09■□□□□ 0.17
CYSTM1-202ENST00000504227 FEM1BQ9UK73 627 aa16.09■□□□□ 0.17
CYSTM1-202ENST00000504227 PHIPQ8WWQ0 1821 aa16.08■□□□□ 0.17
CYSTM1-202ENST00000504227 PLA2G6O60733 806 aa16.08■□□□□ 0.16
CYSTM1-202ENST00000504227 PLEKHA8P1O95397 391 aa16.08■□□□□ 0.16
CYSTM1-202ENST00000504227 SSRP1Q08945 709 aaKnown RBP16.08■□□□□ 0.16
CYSTM1-202ENST00000504227 ST3GAL1Q11201 340 aa16.08■□□□□ 0.16
CYSTM1-202ENST00000504227 MKRN3Q13064 507 aaKnown RBP16.08■□□□□ 0.16
CYSTM1-202ENST00000504227 DGKZQ13574 1117 aa16.08■□□□□ 0.16
CYSTM1-202ENST00000504227 TTBK2Q6IQ55 1244 aa16.08■□□□□ 0.16
CYSTM1-202ENST00000504227 PAXIP1Q6ZW49 1069 aaPredicted RBP16.08■□□□□ 0.16
CYSTM1-202ENST00000504227 FAM160B2Q86V87 743 aa16.08■□□□□ 0.16
CYSTM1-202ENST00000504227 RASAL3Q86YV0 1011 aa16.08■□□□□ 0.16
CYSTM1-202ENST00000504227 CCDC82Q8N4S0 544 aa16.08■□□□□ 0.16
CYSTM1-202ENST00000504227 SRBD1Q8N5C6 995 aaKnown RBP16.08■□□□□ 0.16
CYSTM1-202ENST00000504227 TANGO6Q9C0B7 1094 aa16.08■□□□□ 0.16
CYSTM1-202ENST00000504227 UBA5Q9GZZ9 404 aa16.08■□□□□ 0.16
CYSTM1-202ENST00000504227 USP17L15C9J2P7 530 aa16.07■□□□□ 0.16
CYSTM1-202ENST00000504227 USP17L13C9JLJ4 530 aa16.07■□□□□ 0.16
CYSTM1-202ENST00000504227 USP17L11C9JVI0 530 aa16.07■□□□□ 0.16
CYSTM1-202ENST00000504227 USP17L18D6R9N7 530 aa16.07■□□□□ 0.16
CYSTM1-202ENST00000504227 USP17L22D6RA61 530 aa16.07■□□□□ 0.16
CYSTM1-202ENST00000504227 USP17L17D6RBQ6 530 aa16.07■□□□□ 0.16
CYSTM1-202ENST00000504227 USP17L19D6RCP7 530 aa16.07■□□□□ 0.16
CYSTM1-202ENST00000504227 USP17L20D6RJB6 530 aa16.07■□□□□ 0.16
CYSTM1-202ENST00000504227 SLC10A3P09131 477 aa16.07■□□□□ 0.16
CYSTM1-202ENST00000504227 SLC16A2P36021 539 aa16.07■□□□□ 0.16
CYSTM1-202ENST00000504227 SLC4A3P48751 1232 aa16.07■□□□□ 0.16
CYSTM1-202ENST00000504227 STAT2P52630 851 aa16.07■□□□□ 0.16
CYSTM1-202ENST00000504227 AKAP17AQ02040 695 aaKnown RBP16.07■□□□□ 0.16
CYSTM1-202ENST00000504227 USP17L24Q0WX57 530 aa16.07■□□□□ 0.16
CYSTM1-202ENST00000504227 PABPC4Q13310 644 aaKnown RBP eCLIP16.07■□□□□ 0.167e-8■■□□□ 12
CYSTM1-202ENST00000504227 NTRK3Q16288 839 aa16.07■□□□□ 0.16
CYSTM1-202ENST00000504227 BTNL9Q6UXG8 535 aa16.07■□□□□ 0.16
CYSTM1-202ENST00000504227 TRIM22Q8IYM9 498 aa16.07■□□□□ 0.16
CYSTM1-202ENST00000504227 CMTR1Q8N1G2 835 aaKnown RBP16.07■□□□□ 0.16
CYSTM1-202ENST00000504227 IPO9Q96P70 1041 aaKnown RBP16.07■□□□□ 0.16
CYSTM1-202ENST00000504227 SPZ1Q9BXG8 430 aa16.07■□□□□ 0.16
CYSTM1-202ENST00000504227 VAT1LQ9HCJ6 419 aa16.07■□□□□ 0.16
CYSTM1-202ENST00000504227 SMC3Q9UQE7 1217 aa16.07■□□□□ 0.16
CYSTM1-202ENST00000504227 CCL15-CCL14A0A0B4J2E2 113 aa16.06■□□□□ 0.16
CYSTM1-202ENST00000504227 PTPDC1A2A3K4 754 aa16.06■□□□□ 0.16
CYSTM1-202ENST00000504227 FLOT1O75955 427 aa16.06■□□□□ 0.16
CYSTM1-202ENST00000504227 CTDNEP1O95476 244 aa16.06■□□□□ 0.16
CYSTM1-202ENST00000504227 HMGN5P82970 282 aaKnown RBP16.06■□□□□ 0.16
CYSTM1-202ENST00000504227 FUT2Q10981 343 aa16.06■□□□□ 0.16
CYSTM1-202ENST00000504227 CCL15Q16663 113 aa16.06■□□□□ 0.16
CYSTM1-202ENST00000504227 DEFB115Q30KQ5 88 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms