RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 TATDN1Q6P1N9 297 aa10.78□□□□□ -0.68
ARHGEF28-206ENST00000504003 CPLX2Q6PUV4 134 aaKnown RBP10.78□□□□□ -0.68
ARHGEF28-206ENST00000504003 BLOC1S3Q6QNY0 202 aa10.78□□□□□ -0.68
ARHGEF28-206ENST00000504003 TMEM179Q6ZVK1 233 aa10.78□□□□□ -0.68
ARHGEF28-206ENST00000504003 CATIPQ7Z7H3 387 aa10.78□□□□□ -0.68
ARHGEF28-206ENST00000504003 USP48Q86UV5 1035 aa10.78□□□□□ -0.68
ARHGEF28-206ENST00000504003 LDHDQ86WU2 507 aa10.78□□□□□ -0.68
ARHGEF28-206ENST00000504003 DGKHQ86XP1 1220 aa10.78□□□□□ -0.68
ARHGEF28-206ENST00000504003 NEDD1Q8NHV4 660 aa10.78□□□□□ -0.68
ARHGEF28-206ENST00000504003 SH2D4AQ9H788 454 aa10.78□□□□□ -0.68
ARHGEF28-206ENST00000504003 KAT14Q9H8E8 782 aa10.78□□□□□ -0.68
ARHGEF28-206ENST00000504003 SLC12A7Q9Y666 1083 aa10.78□□□□□ -0.68
ARHGEF28-206ENST00000504003 TNKSO95271 1327 aa10.78□□□□□ -0.68
ARHGEF28-206ENST00000504003 CCDC196A0A1B0GTZ2 297 aa10.77□□□□□ -0.69
ARHGEF28-206ENST00000504003 ASNSP08243 561 aa10.77□□□□□ -0.69
ARHGEF28-206ENST00000504003 IREB2P48200 963 aaKnown RBP10.77□□□□□ -0.69
ARHGEF28-206ENST00000504003 RCAN1P53805 252 aa10.77□□□□□ -0.69
ARHGEF28-206ENST00000504003 FAM47AQ5JRC9 791 aa10.77□□□□□ -0.69
ARHGEF28-206ENST00000504003 CYB5R4Q7L1T6 521 aa10.77□□□□□ -0.69
ARHGEF28-206ENST00000504003 SH3BP5LQ7L8J4 393 aa10.77□□□□□ -0.69
ARHGEF28-206ENST00000504003 CHST3Q7LGC8 479 aa10.77□□□□□ -0.69
ARHGEF28-206ENST00000504003 BRF1Q92994 677 aa10.77□□□□□ -0.69
ARHGEF28-206ENST00000504003 ZNF274Q96GC6 653 aaPredicted RBP10.77□□□□□ -0.69
ARHGEF28-206ENST00000504003 IPO9Q96P70 1041 aaKnown RBP10.77□□□□□ -0.69
ARHGEF28-206ENST00000504003 AGXT2Q9BYV1 514 aa10.77□□□□□ -0.69
ARHGEF28-206ENST00000504003 SLKQ9H2G2 1235 aaPredicted RBP10.77□□□□□ -0.69
ARHGEF28-206ENST00000504003 KANSL2Q9H9L4 492 aa10.77□□□□□ -0.69
ARHGEF28-206ENST00000504003 GPBP1L1Q9HC44 474 aaPredicted RBP10.77□□□□□ -0.69
ARHGEF28-206ENST00000504003 STX8Q9UNK0 236 aa10.77□□□□□ -0.69
ARHGEF28-206ENST00000504003 KIF3AQ9Y496 699 aa10.77□□□□□ -0.69
ARHGEF28-206ENST00000504003 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.77□□□□□ -0.69
ARHGEF28-206ENST00000504003 TAF6LQ9Y6J9 622 aa10.77□□□□□ -0.69
ARHGEF28-206ENST00000504003 RCCD1A6NED2 376 aa10.76□□□□□ -0.69
ARHGEF28-206ENST00000504003 SH2B2O14492 632 aaPredicted RBP10.76□□□□□ -0.69
ARHGEF28-206ENST00000504003 ZBTB43O43298 467 aa10.76□□□□□ -0.69
ARHGEF28-206ENST00000504003 CTNND1O60716 968 aaKnown RBP10.76□□□□□ -0.69
ARHGEF28-206ENST00000504003 TTLL1O95922 423 aa10.76□□□□□ -0.69
ARHGEF28-206ENST00000504003 CPA1P15085 419 aa10.76□□□□□ -0.69
ARHGEF28-206ENST00000504003 SHMT1P34896 483 aa10.76□□□□□ -0.69
ARHGEF28-206ENST00000504003 MAP3K10Q02779 954 aa10.76□□□□□ -0.69
ARHGEF28-206ENST00000504003 NOL8Q76FK4 1167 aaKnown RBP10.76□□□□□ -0.69
ARHGEF28-206ENST00000504003 MIGA2Q7L4E1 593 aa10.76□□□□□ -0.69
ARHGEF28-206ENST00000504003 SGMS1Q86VZ5 419 aa10.76□□□□□ -0.69
ARHGEF28-206ENST00000504003 SLC44A5Q8NCS7 719 aa10.76□□□□□ -0.69
ARHGEF28-206ENST00000504003 IGDCC4Q8TDY8 1250 aa10.76□□□□□ -0.69
ARHGEF28-206ENST00000504003 ZKSCAN3Q9BRR0 538 aa10.76□□□□□ -0.69
ARHGEF28-206ENST00000504003 TBC1D2Q9BYX2 928 aa10.76□□□□□ -0.69
ARHGEF28-206ENST00000504003 ARHGEF10LQ9HCE6 1279 aa10.76□□□□□ -0.69
ARHGEF28-206ENST00000504003 INCENPQ9NQS7 918 aa10.76□□□□□ -0.69
ARHGEF28-206ENST00000504003 PICK1Q9NRD5 415 aa10.76□□□□□ -0.69
ARHGEF28-206ENST00000504003 PLIN4Q96Q06 1357 aa10.76□□□□□ -0.69
ARHGEF28-206ENST00000504003 KLF18A0A0U1RQI7 1052 aa10.75□□□□□ -0.69
ARHGEF28-206ENST00000504003 CPLX1O14810 134 aa10.75□□□□□ -0.69
ARHGEF28-206ENST00000504003 CDKL5O76039 1030 aa10.75□□□□□ -0.69
ARHGEF28-206ENST00000504003 DDAH1O94760 285 aa10.75□□□□□ -0.69
ARHGEF28-206ENST00000504003 CFHP08603 1231 aa10.75□□□□□ -0.69
ARHGEF28-206ENST00000504003 TOP1P11387 765 aaKnown RBP10.75□□□□□ -0.69
ARHGEF28-206ENST00000504003 KIF5BP33176 963 aa10.75□□□□□ -0.69
ARHGEF28-206ENST00000504003 TTLL12Q14166 644 aaPredicted RBP10.75□□□□□ -0.69
ARHGEF28-206ENST00000504003 RAB3GAP1Q15042 981 aa10.75□□□□□ -0.69
ARHGEF28-206ENST00000504003 NBPF12Q5TAG4 269 aaPredicted RBP10.75□□□□□ -0.69
ARHGEF28-206ENST00000504003 ARMC9Q7Z3E5 817 aa10.75□□□□□ -0.69
ARHGEF28-206ENST00000504003 ZNF526Q8TF50 670 aaPredicted RBP10.75□□□□□ -0.69
ARHGEF28-206ENST00000504003 ANKS1AQ92625 1134 aa10.75□□□□□ -0.69
ARHGEF28-206ENST00000504003 TCEANC2Q96MN5 208 aa10.75□□□□□ -0.69
ARHGEF28-206ENST00000504003 TEPSINQ96N21 525 aa10.75□□□□□ -0.69
ARHGEF28-206ENST00000504003 LRRC2Q9BYS8 371 aa10.75□□□□□ -0.69
ARHGEF28-206ENST00000504003 AS3MTQ9HBK9 375 aa10.75□□□□□ -0.69
ARHGEF28-206ENST00000504003 RBM28Q9NW13 759 aaKnown RBP10.75□□□□□ -0.69
ARHGEF28-206ENST00000504003 SYNPO2Q9UMS6 1093 aa10.75□□□□□ -0.69
ARHGEF28-206ENST00000504003 CSADQ9Y600 493 aa10.75□□□□□ -0.69
ARHGEF28-206ENST00000504003 ASTN2O75129 1339 aaPredicted RBP10.75□□□□□ -0.69
ARHGEF28-206ENST00000504003 POLR2AP24928 1970 aaKnown RBP10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 UNCXA6NJT0 531 aa10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 GOLGA8BA8MQT2 603 aa10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 POTECB2RU33 542 aa10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 ACTN4O43707 911 aaKnown RBP10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 PDIA4P13667 645 aaKnown RBP10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 AKR1B1P15121 316 aa10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 CAP2P40123 477 aa10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 GNAQP50148 359 aa10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 METAP2P50579 478 aaKnown RBP eCLIP10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 EVCP57679 992 aa10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 ANTXR2P58335 489 aa10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 ATP2B2Q01814 1243 aa10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 ICA1Q05084 483 aa10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 APOBRQ0VD83 1088 aa10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 TOB2Q14106 344 aaPredicted RBP10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 ENAHQ8N8S7 591 aaPredicted RBP10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 CTCFLQ8NI51 663 aaPredicted RBP10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 INTS4Q96HW7 963 aaKnown RBP10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 TMX3Q96JJ7 454 aa10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 WRNIP1Q96S55 665 aa10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 LY9Q9HBG7 655 aa10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 GOPCQ9HD26 462 aa10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 MTMR4Q9NYA4 1195 aa10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 NYAP2Q9P242 653 aa10.74□□□□□ -0.69
ARHGEF28-206ENST00000504003 SIPA1L1O43166 1804 aa10.73□□□□□ -0.69
ARHGEF28-206ENST00000504003 FAM196BA6NMK8 535 aa10.73□□□□□ -0.69
ARHGEF28-206ENST00000504003 GOLGA8AA7E2F4 631 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms