RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 HOXC10Q9NYD6 342 aa13.06□□□□□ -0.32
VCAN-205ENST00000503923 CPA4Q9UI42 421 aa13.06□□□□□ -0.32
VCAN-205ENST00000503923 MYPNQ86TC9 1320 aa13.06□□□□□ -0.32
VCAN-205ENST00000503923 WDR19Q8NEZ3 1342 aa13.06□□□□□ -0.32
VCAN-205ENST00000503923 FKTNO75072 461 aa13.05□□□□□ -0.32
VCAN-205ENST00000503923 SEC24BO95487 1268 aa13.05□□□□□ -0.32
VCAN-205ENST00000503923 BCRP11274 1271 aa13.05□□□□□ -0.32
VCAN-205ENST00000503923 PSMA5P28066 241 aa13.05□□□□□ -0.32
VCAN-205ENST00000503923 SP3Q02447 781 aa13.05□□□□□ -0.32
VCAN-205ENST00000503923 TMEM67Q5HYA8 995 aa13.05□□□□□ -0.32
VCAN-205ENST00000503923 LBX2Q6XYB7 198 aa13.05□□□□□ -0.32
VCAN-205ENST00000503923 DHX32Q7L7V1 743 aaKnown RBP13.05□□□□□ -0.32
VCAN-205ENST00000503923 PNMA1Q8ND90 353 aa13.05□□□□□ -0.32
VCAN-205ENST00000503923 IGDCC4Q8TDY8 1250 aa13.05□□□□□ -0.32
VCAN-205ENST00000503923 JAKMIP1Q96N16 626 aaKnown RBP13.05□□□□□ -0.32
VCAN-205ENST00000503923 ISY1Q9ULR0 285 aaKnown RBP13.05□□□□□ -0.32
VCAN-205ENST00000503923 MTMR7Q9Y216 660 aa13.05□□□□□ -0.32
VCAN-205ENST00000503923 SPDYE16A6NNV3 312 aaPredicted RBP13.04□□□□□ -0.32
VCAN-205ENST00000503923 SH2B2O14492 632 aaPredicted RBP13.04□□□□□ -0.32
VCAN-205ENST00000503923 PDHBP11177 359 aa13.04□□□□□ -0.32
VCAN-205ENST00000503923 DSG3P32926 999 aa13.04□□□□□ -0.32
VCAN-205ENST00000503923 ANAPC15P60006 121 aa13.04□□□□□ -0.32
VCAN-205ENST00000503923 EXOSC10Q01780 885 aaKnown RBP13.04□□□□□ -0.32
VCAN-205ENST00000503923 FAM110CQ1W6H9 321 aa13.04□□□□□ -0.32
VCAN-205ENST00000503923 CCDC96Q2M329 555 aa13.04□□□□□ -0.32
VCAN-205ENST00000503923 BLOC1S2Q6QNY1 142 aa13.04□□□□□ -0.32
VCAN-205ENST00000503923 TMTC2Q8N394 836 aa13.04□□□□□ -0.32
VCAN-205ENST00000503923 ANKRD13CQ8N6S4 541 aa13.04□□□□□ -0.32
VCAN-205ENST00000503923 ZNF296Q8WUU4 475 aaPredicted RBP13.04□□□□□ -0.32
VCAN-205ENST00000503923 SLF1Q9BQI6 1058 aa13.04□□□□□ -0.32
VCAN-205ENST00000503923 FEM1BQ9UK73 627 aa13.04□□□□□ -0.32
VCAN-205ENST00000503923 PPP1R9AQ9ULJ8 1098 aa13.04□□□□□ -0.32
VCAN-205ENST00000503923 PARP14Q460N5 1801 aa13.04□□□□□ -0.32
VCAN-205ENST00000503923 RLFQ13129 1914 aa13.03□□□□□ -0.32
VCAN-205ENST00000503923 TMEM232C9JQI7 657 aa13.03□□□□□ -0.32
VCAN-205ENST00000503923 PLA2G6O60733 806 aa13.03□□□□□ -0.32
VCAN-205ENST00000503923 SNHG28P0DPA3 235 aa13.03□□□□□ -0.32
VCAN-205ENST00000503923 LIFRP42702 1097 aa13.03□□□□□ -0.32
VCAN-205ENST00000503923 STAT2P52630 851 aa13.03□□□□□ -0.32
VCAN-205ENST00000503923 COL9A3Q14050 684 aaPredicted RBP13.03□□□□□ -0.32
VCAN-205ENST00000503923 FAM160B2Q86V87 743 aa13.03□□□□□ -0.32
VCAN-205ENST00000503923 MB21D1Q8N884 522 aa13.03□□□□□ -0.32
VCAN-205ENST00000503923 PRPF38AQ8NAV1 312 aaKnown RBP13.03□□□□□ -0.32
VCAN-205ENST00000503923 GPRC5AQ8NFJ5 357 aa13.03□□□□□ -0.32
VCAN-205ENST00000503923 CHURC1Q8WUH1 139 aa13.03□□□□□ -0.32
VCAN-205ENST00000503923 CHMP4CQ96CF2 233 aa13.03□□□□□ -0.32
VCAN-205ENST00000503923 ERO1AQ96HE7 468 aa13.03□□□□□ -0.32
VCAN-205ENST00000503923 LY9Q9HBG7 655 aa13.03□□□□□ -0.32
VCAN-205ENST00000503923 PRDM10Q9NQV6 1147 aa13.03□□□□□ -0.32
VCAN-205ENST00000503923 FBXO28Q9NVF7 368 aa13.03□□□□□ -0.32
VCAN-205ENST00000503923 MORF4L1Q9UBU8 362 aa13.03□□□□□ -0.32
VCAN-205ENST00000503923 RABGAP1Q9Y3P9 1069 aa13.03□□□□□ -0.32
VCAN-205ENST00000503923 CASP8AP2Q9UKL3 1982 aa13.02□□□□□ -0.32
VCAN-205ENST00000503923 CCDC69A6NI79 296 aa13.02□□□□□ -0.33
VCAN-205ENST00000503923 CASTP20810 708 aaKnown RBP13.02□□□□□ -0.33
VCAN-205ENST00000503923 RPS6KB1P23443 525 aa13.02□□□□□ -0.33
VCAN-205ENST00000503923 ZNF543Q08ER8 600 aa13.02□□□□□ -0.33
VCAN-205ENST00000503923 IKQ13123 557 aaPredicted RBP13.02□□□□□ -0.33
VCAN-205ENST00000503923 KIF22Q14807 665 aa13.02□□□□□ -0.33
VCAN-205ENST00000503923 GPATCH4Q5T3I0 446 aaKnown RBP13.02□□□□□ -0.33
VCAN-205ENST00000503923 SAMD1Q6SPF0 538 aaPredicted RBP13.02□□□□□ -0.33
VCAN-205ENST00000503923 NFXL1Q6ZNB6 911 aa13.02□□□□□ -0.33
VCAN-205ENST00000503923 KCTD1Q719H9 257 aa13.02□□□□□ -0.33
VCAN-205ENST00000503923 RASGRP2Q7LDG7 609 aa13.02□□□□□ -0.33
VCAN-205ENST00000503923 CATIPQ7Z7H3 387 aa13.02□□□□□ -0.33
VCAN-205ENST00000503923 ATG4CQ96DT6 458 aa13.02□□□□□ -0.33
VCAN-205ENST00000503923 PAGR1Q9BTK6 254 aa13.02□□□□□ -0.33
VCAN-205ENST00000503923 LRRC2Q9BYS8 371 aa13.02□□□□□ -0.33
VCAN-205ENST00000503923 TM6SF1Q9BZW5 370 aa13.02□□□□□ -0.33
VCAN-205ENST00000503923 SENP2Q9HC62 589 aa13.02□□□□□ -0.33
VCAN-205ENST00000503923 TXNRD2Q9NNW7 524 aa13.02□□□□□ -0.33
VCAN-205ENST00000503923 RBPJLQ9UBG7 517 aa13.02□□□□□ -0.33
VCAN-205ENST00000503923 ADAMTS5Q9UNA0 930 aa13.02□□□□□ -0.33
VCAN-205ENST00000503923 A0A0G2JMZ2 1700 aa13.02□□□□□ -0.33
VCAN-205ENST00000503923 VWA5AO00534 786 aa13.01□□□□□ -0.33
VCAN-205ENST00000503923 CNMDO75829 334 aa13.01□□□□□ -0.33
VCAN-205ENST00000503923 DDAH1O94760 285 aa13.01□□□□□ -0.33
VCAN-205ENST00000503923 PARP1P09874 1014 aaKnown RBP13.01□□□□□ -0.33
VCAN-205ENST00000503923 FDX1P10109 184 aa13.01□□□□□ -0.33
VCAN-205ENST00000503923 ERVK-9P63128 1117 aa13.01□□□□□ -0.33
VCAN-205ENST00000503923 ERVK-24P63145 666 aa13.01□□□□□ -0.33
VCAN-205ENST00000503923 LACTBP83111 547 aaPredicted RBP13.01□□□□□ -0.33
VCAN-205ENST00000503923 FGD1P98174 961 aa13.01□□□□□ -0.33
VCAN-205ENST00000503923 ARHGEF6Q15052 776 aa13.01□□□□□ -0.33
VCAN-205ENST00000503923 ASPRV1Q53RT3 343 aa13.01□□□□□ -0.33
VCAN-205ENST00000503923 POTEEQ6S8J3 1075 aa13.01□□□□□ -0.33
VCAN-205ENST00000503923 BTNL9Q6UXG8 535 aa13.01□□□□□ -0.33
VCAN-205ENST00000503923 RUFY3Q7L099 469 aa13.01□□□□□ -0.33
VCAN-205ENST00000503923 SGMS1Q86VZ5 419 aa13.01□□□□□ -0.33
VCAN-205ENST00000503923 KIFC2Q96AC6 838 aa13.01□□□□□ -0.33
VCAN-205ENST00000503923 TCEANC2Q96MN5 208 aa13.01□□□□□ -0.33
VCAN-205ENST00000503923 UPF2Q9HAU5 1272 aaKnown RBP13.01□□□□□ -0.33
VCAN-205ENST00000503923 ZSWIM6Q9HCJ5 1215 aa13.01□□□□□ -0.33
VCAN-205ENST00000503923 GPCPD1Q9NPB8 672 aa13.01□□□□□ -0.33
VCAN-205ENST00000503923 GPHNQ9NQX3 736 aaPredicted RBP13.01□□□□□ -0.33
VCAN-205ENST00000503923 CYP46A1Q9Y6A2 500 aa13.01□□□□□ -0.33
VCAN-205ENST00000503923 FRMPD2Q68DX3 1309 aaPredicted RBP13.01□□□□□ -0.33
VCAN-205ENST00000503923 ZBED4O75132 1171 aa13□□□□□ -0.33
VCAN-205ENST00000503923 CPA1P15085 419 aa13□□□□□ -0.33
VCAN-205ENST00000503923 CCNA1P78396 465 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms