RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 TMEM240Q5SV17 173 aa19.27■□□□□ 0.68
PDLIM7-210ENST00000503827 ZNF512BQ96KM6 892 aaPredicted RBP19.27■□□□□ 0.68
PDLIM7-210ENST00000503827 MMP19Q99542 508 aa19.27■□□□□ 0.68
PDLIM7-210ENST00000503827 MSRAQ9UJ68 235 aa19.27■□□□□ 0.68
PDLIM7-210ENST00000503827 TBX21Q9UL17 535 aa19.27■□□□□ 0.68
PDLIM7-210ENST00000503827 FPGT-TNNI3KV9GXZ4 949 aa19.27■□□□□ 0.68
PDLIM7-210ENST00000503827 MROH7Q68CQ1 1323 aa19.26■□□□□ 0.67
PDLIM7-210ENST00000503827 NAV1Q8NEY1 1877 aa19.26■□□□□ 0.67
PDLIM7-210ENST00000503827 MOXD2PA6NHM9 499 aa19.26■□□□□ 0.67
PDLIM7-210ENST00000503827 ADAMTS4O75173 837 aa19.26■□□□□ 0.67
PDLIM7-210ENST00000503827 IDH1O75874 414 aaKnown RBP19.26■□□□□ 0.67
PDLIM7-210ENST00000503827 FLOT1O75955 427 aa19.26■□□□□ 0.67
PDLIM7-210ENST00000503827 PLCD1P51178 756 aa19.26■□□□□ 0.67
PDLIM7-210ENST00000503827 RAB30Q15771 203 aa19.26■□□□□ 0.67
PDLIM7-210ENST00000503827 RASIP1Q5U651 963 aa19.26■□□□□ 0.67
PDLIM7-210ENST00000503827 TMEM199Q8N511 208 aa19.26■□□□□ 0.67
PDLIM7-210ENST00000503827 ATG4CQ96DT6 458 aa19.26■□□□□ 0.67
PDLIM7-210ENST00000503827 DIS3Q9Y2L1 958 aaKnown RBP19.26■□□□□ 0.67
PDLIM7-210ENST00000503827 PNMA6EA0A0J9YXQ4 647 aa19.25■□□□□ 0.67
PDLIM7-210ENST00000503827 GNAI2P04899 355 aa19.25■□□□□ 0.67
PDLIM7-210ENST00000503827 POLR3DP05423 398 aaPredicted RBP19.25■□□□□ 0.67
PDLIM7-210ENST00000503827 TAL1P17542 331 aaPredicted RBP19.25■□□□□ 0.67
PDLIM7-210ENST00000503827 PSRC1Q6PGN9 363 aaPredicted RBP19.25■□□□□ 0.67
PDLIM7-210ENST00000503827 C16orf59Q7L2K0 433 aa19.25■□□□□ 0.67
PDLIM7-210ENST00000503827 MAGEB6Q8N7X4 407 aa19.25■□□□□ 0.67
PDLIM7-210ENST00000503827 CNPY2Q9Y2B0 182 aa19.25■□□□□ 0.67
PDLIM7-210ENST00000503827 BDP1A6H8Y1 2624 aa19.24■□□□□ 0.67
PDLIM7-210ENST00000503827 PGK2P07205 417 aa19.24■□□□□ 0.67
PDLIM7-210ENST00000503827 CT47B1P0C2W7 299 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-210ENST00000503827 ZNF865P0CJ78 1059 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-210ENST00000503827 CSF2RAP15509 400 aa19.24■□□□□ 0.67
PDLIM7-210ENST00000503827 KCTD2Q14681 263 aa19.24■□□□□ 0.67
PDLIM7-210ENST00000503827 SAMD1Q6SPF0 538 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-210ENST00000503827 ZNF365Q70YC5 407 aa19.24■□□□□ 0.67
PDLIM7-210ENST00000503827 LENG1Q96BZ8 264 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-210ENST00000503827 GLT1D1Q96MS3 346 aa19.24■□□□□ 0.67
PDLIM7-210ENST00000503827 SLC28A3Q9HAS3 691 aa19.24■□□□□ 0.67
PDLIM7-210ENST00000503827 CXXC1Q9P0U4 656 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-210ENST00000503827 ARIH1Q9Y4X5 557 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-210ENST00000503827 OS9Q13438 667 aaPredicted RBP19.23■□□□□ 0.67
PDLIM7-210ENST00000503827 TMEM132BQ14DG7 1078 aa19.23■□□□□ 0.67
PDLIM7-210ENST00000503827 KCNA10Q16322 511 aa19.23■□□□□ 0.67
PDLIM7-210ENST00000503827 ZNF792Q3KQV3 632 aa19.23■□□□□ 0.67
PDLIM7-210ENST00000503827 CDCA7LQ96GN5 454 aa19.23■□□□□ 0.67
PDLIM7-210ENST00000503827 MTIF3Q9H2K0 278 aaKnown RBP19.23■□□□□ 0.67
PDLIM7-210ENST00000503827 HCN4Q9Y3Q4 1203 aa19.23■□□□□ 0.67
PDLIM7-210ENST00000503827 ELP1O95163 1332 aa19.23■□□□□ 0.67
PDLIM7-210ENST00000503827 SYNRGQ9UMZ2 1314 aa19.23■□□□□ 0.67
PDLIM7-210ENST00000503827 APBB1O00213 710 aa19.22■□□□□ 0.67
PDLIM7-210ENST00000503827 ACRP10323 421 aa19.22■□□□□ 0.67
PDLIM7-210ENST00000503827 BMP1P13497 986 aa19.22■□□□□ 0.67
PDLIM7-210ENST00000503827 GABPAQ06546 454 aa19.22■□□□□ 0.67
PDLIM7-210ENST00000503827 AAK1Q2M2I8 961 aa19.22■□□□□ 0.67
PDLIM7-210ENST00000503827 KIAA1755Q5JYT7 1200 aa19.22■□□□□ 0.67
PDLIM7-210ENST00000503827 TMED8Q6PL24 325 aaPredicted RBP19.22■□□□□ 0.67
PDLIM7-210ENST00000503827 TMEM179Q6ZVK1 233 aa19.22■□□□□ 0.67
PDLIM7-210ENST00000503827 KLHDC9Q8NEP7 349 aa19.22■□□□□ 0.67
PDLIM7-210ENST00000503827 ARHGAP45Q92619 1136 aa19.22■□□□□ 0.67
PDLIM7-210ENST00000503827 NECAB3Q96P71 396 aaPredicted RBP19.22■□□□□ 0.67
PDLIM7-210ENST00000503827 NKX2-4Q9H2Z4 354 aa19.22■□□□□ 0.67
PDLIM7-210ENST00000503827 SH2D4AQ9H788 454 aa19.22■□□□□ 0.67
PDLIM7-210ENST00000503827 ARHGEF10LQ9HCE6 1279 aa19.22■□□□□ 0.67
PDLIM7-210ENST00000503827 FAM184BQ9ULE4 1060 aa19.22■□□□□ 0.67
PDLIM7-210ENST00000503827 RIOX2Q8IUF8 465 aa19.21■□□□□ 0.67
PDLIM7-210ENST00000503827 SPICE1Q8N0Z3 855 aa19.21■□□□□ 0.67
PDLIM7-210ENST00000503827 VTI1AQ96AJ9 217 aa19.21■□□□□ 0.67
PDLIM7-210ENST00000503827 SYNGAP1Q96PV0 1343 aa19.21■□□□□ 0.67
PDLIM7-210ENST00000503827 WDR46O15213 610 aaKnown RBP19.2■□□□□ 0.66
PDLIM7-210ENST00000503827 TLR3O15455 904 aaKnown RBP19.2■□□□□ 0.66
PDLIM7-210ENST00000503827 CDK7P50613 346 aa19.2■□□□□ 0.66
PDLIM7-210ENST00000503827 CCSAPQ6IQ19 270 aaPredicted RBP19.2■□□□□ 0.66
PDLIM7-210ENST00000503827 PCSK9Q8NBP7 692 aaKnown RBP19.2■□□□□ 0.66
PDLIM7-210ENST00000503827 HERVK_113Q902F9 699 aa19.2■□□□□ 0.66
PDLIM7-210ENST00000503827 PPP1R12CQ9BZL4 782 aa19.2■□□□□ 0.66
PDLIM7-210ENST00000503827 VCPKMTQ9H867 229 aa19.2■□□□□ 0.66
PDLIM7-210ENST00000503827 TMX2Q9Y320 296 aa19.2■□□□□ 0.66
PDLIM7-210ENST00000503827 COPB2P35606 906 aa19.19■□□□□ 0.66
PDLIM7-210ENST00000503827 MSL3Q8N5Y2 521 aaKnown RBP19.19■□□□□ 0.66
PDLIM7-210ENST00000503827 IL23AQ9NPF7 189 aa19.19■□□□□ 0.66
PDLIM7-210ENST00000503827 MCM9Q9NXL9 1143 aa19.19■□□□□ 0.66
PDLIM7-210ENST00000503827 ADAMTS5Q9UNA0 930 aa19.19■□□□□ 0.66
PDLIM7-210ENST00000503827 A0A0U1RQG5 324 aaPredicted RBP19.18■□□□□ 0.66
PDLIM7-210ENST00000503827 ARVCFO00192 962 aa19.18■□□□□ 0.66
PDLIM7-210ENST00000503827 DUSP11O75319 330 aaKnown RBP19.18■□□□□ 0.66
PDLIM7-210ENST00000503827 FGBP02675 491 aa19.18■□□□□ 0.66
PDLIM7-210ENST00000503827 CST5P28325 142 aaPredicted RBP19.18■□□□□ 0.66
PDLIM7-210ENST00000503827 STAT3P40763 770 aa19.18■□□□□ 0.66
PDLIM7-210ENST00000503827 MICALL1Q8N3F8 863 aa19.18■□□□□ 0.66
PDLIM7-210ENST00000503827 RIOK1Q9BRS2 568 aaKnown RBP19.18■□□□□ 0.66
PDLIM7-210ENST00000503827 LRFN3Q9BTN0 628 aa19.18■□□□□ 0.66
PDLIM7-210ENST00000503827 SPC25Q9HBM1 224 aa19.18■□□□□ 0.66
PDLIM7-210ENST00000503827 DBNLQ9UJU6 430 aaKnown RBP19.18■□□□□ 0.66
PDLIM7-210ENST00000503827 ZHX1Q9UKY1 873 aaPredicted RBP19.18■□□□□ 0.66
PDLIM7-210ENST00000503827 CHD9Q3L8U1 2897 aa19.18■□□□□ 0.66
PDLIM7-210ENST00000503827 MAGEB6P1A0A0J9YX57 407 aa19.17■□□□□ 0.66
PDLIM7-210ENST00000503827 ASGR1P07306 291 aa19.17■□□□□ 0.66
PDLIM7-210ENST00000503827 C6orf222P0C671 652 aaPredicted RBP19.17■□□□□ 0.66
PDLIM7-210ENST00000503827 TFF2Q03403 129 aa19.17■□□□□ 0.66
PDLIM7-210ENST00000503827 ICA1Q05084 483 aa19.17■□□□□ 0.66
PDLIM7-210ENST00000503827 FAM126BQ8IXS8 530 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms