RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 PDE1AP54750 535 aa19.42■□□□□ 0.7
SCLT1-204ENST00000503215 MFSD14CQ5VZR4 134 aa19.42■□□□□ 0.7
SCLT1-204ENST00000503215 NCAPG2Q86XI2 1143 aa19.42■□□□□ 0.7
SCLT1-204ENST00000503215 MB21D1Q8N884 522 aa19.42■□□□□ 0.7
SCLT1-204ENST00000503215 SHCBP1Q8NEM2 672 aa19.42■□□□□ 0.7
SCLT1-204ENST00000503215 NBPF3Q9H094 633 aa19.42■□□□□ 0.7
SCLT1-204ENST00000503215 GOPCQ9HD26 462 aa19.42■□□□□ 0.7
SCLT1-204ENST00000503215 INCENPQ9NQS7 918 aa19.42■□□□□ 0.7
SCLT1-204ENST00000503215 STAP2Q9UGK3 403 aa19.42■□□□□ 0.7
SCLT1-204ENST00000503215 NR2E3Q9Y5X4 410 aa19.42■□□□□ 0.7
SCLT1-204ENST00000503215 A0A0G2JMZ2 1700 aa19.41■□□□□ 0.7
SCLT1-204ENST00000503215 NDUFB10O96000 172 aa19.41■□□□□ 0.7
SCLT1-204ENST00000503215 DPP9Q86TI2 863 aa19.41■□□□□ 0.7
SCLT1-204ENST00000503215 NYAP2Q9P242 653 aa19.41■□□□□ 0.7
SCLT1-204ENST00000503215 CLIP2Q9UDT6 1046 aa19.41■□□□□ 0.7
SCLT1-204ENST00000503215 PPP1R9AQ9ULJ8 1098 aa19.41■□□□□ 0.7
SCLT1-204ENST00000503215 ALPK3Q96L96 1907 aa19.41■□□□□ 0.7
SCLT1-204ENST00000503215 GREB1LQ9C091 1923 aaPredicted RBP19.41■□□□□ 0.7
SCLT1-204ENST00000503215 PFASO15067 1338 aa19.41■□□□□ 0.7
SCLT1-204ENST00000503215 F5H6K3 240 aa19.4■□□□□ 0.7
SCLT1-204ENST00000503215 VWA5AO00534 786 aa19.4■□□□□ 0.7
SCLT1-204ENST00000503215 KLRC3Q07444 240 aa19.4■□□□□ 0.7
SCLT1-204ENST00000503215 LRRFIP1Q32MZ4 808 aaKnown RBP19.4■□□□□ 0.7
SCLT1-204ENST00000503215 FAM47AQ5JRC9 791 aa19.4■□□□□ 0.7
SCLT1-204ENST00000503215 VPS53Q5VIR6 699 aa19.4■□□□□ 0.7
SCLT1-204ENST00000503215 ZNF444Q8N0Y2 327 aaPredicted RBP19.4■□□□□ 0.7
SCLT1-204ENST00000503215 REPS2Q8NFH8 660 aa19.4■□□□□ 0.7
SCLT1-204ENST00000503215 CEP95Q96GE4 821 aa19.4■□□□□ 0.7
SCLT1-204ENST00000503215 PRO3102Q9H379 93 aa19.4■□□□□ 0.7
SCLT1-204ENST00000503215 C11orf49Q9H6J7 331 aa19.4■□□□□ 0.7
SCLT1-204ENST00000503215 TACC3Q9Y6A5 838 aa19.4■□□□□ 0.7
SCLT1-204ENST00000503215 PARP14Q460N5 1801 aa19.4■□□□□ 0.7
SCLT1-204ENST00000503215 STRNO43815 780 aa19.39■□□□□ 0.69
SCLT1-204ENST00000503215 IGHDP01880 384 aa19.39■□□□□ 0.69
SCLT1-204ENST00000503215 PRAMEF19Q5SWL8 479 aa19.39■□□□□ 0.69
SCLT1-204ENST00000503215 C7orf61Q8IZ16 206 aa19.39■□□□□ 0.69
SCLT1-204ENST00000503215 LNPKQ9C0E8 428 aa19.39■□□□□ 0.69
SCLT1-204ENST00000503215 MROH8Q9H579 483 aa19.39■□□□□ 0.69
SCLT1-204ENST00000503215 COL6A1P12109 1028 aa19.38■□□□□ 0.69
SCLT1-204ENST00000503215 CNGA1P29973 690 aa19.38■□□□□ 0.69
SCLT1-204ENST00000503215 PPARAQ07869 468 aa19.38■□□□□ 0.69
SCLT1-204ENST00000503215 B4GALNT3Q6L9W6 998 aa19.38■□□□□ 0.69
SCLT1-204ENST00000503215 LRRC47Q8N1G4 583 aaKnown RBP19.38■□□□□ 0.69
SCLT1-204ENST00000503215 EXOC6Q8TAG9 804 aa19.38■□□□□ 0.69
SCLT1-204ENST00000503215 NACAP1Q9BZK3 213 aa19.38■□□□□ 0.69
SCLT1-204ENST00000503215 NAPBQ9H115 298 aa19.38■□□□□ 0.69
SCLT1-204ENST00000503215 MTMR4Q9NYA4 1195 aa19.38■□□□□ 0.69
SCLT1-204ENST00000503215 ZBTB47Q9UFB7 747 aaPredicted RBP19.38■□□□□ 0.69
SCLT1-204ENST00000503215 ZNF214Q9UL59 606 aaPredicted RBP19.38■□□□□ 0.69
SCLT1-204ENST00000503215 ZMYND8Q9ULU4 1186 aaPredicted RBP19.38■□□□□ 0.69
SCLT1-204ENST00000503215 PGK2P07205 417 aa19.37■□□□□ 0.69
SCLT1-204ENST00000503215 CYBAP13498 195 aa19.37■□□□□ 0.69
SCLT1-204ENST00000503215 STAT3P40763 770 aa19.37■□□□□ 0.69
SCLT1-204ENST00000503215 CTDSPL2Q05D32 466 aa19.37■□□□□ 0.69
SCLT1-204ENST00000503215 ANO1Q5XXA6 986 aa19.37■□□□□ 0.69
SCLT1-204ENST00000503215 RIOX2Q8IUF8 465 aa19.37■□□□□ 0.69
SCLT1-204ENST00000503215 CHMP4CQ96CF2 233 aa19.37■□□□□ 0.69
SCLT1-204ENST00000503215 EVI5LQ96CN4 794 aa19.37■□□□□ 0.69
SCLT1-204ENST00000503215 FAM227BQ96M60 508 aa19.37■□□□□ 0.69
SCLT1-204ENST00000503215 DDX20Q9UHI6 824 aaKnown RBP19.37■□□□□ 0.69
SCLT1-204ENST00000503215 COL11A1P12107 1806 aaPredicted RBP19.36■□□□□ 0.69
SCLT1-204ENST00000503215 TFAP4Q01664 338 aa19.36■□□□□ 0.69
SCLT1-204ENST00000503215 OLFML2BQ68BL8 750 aa19.36■□□□□ 0.69
SCLT1-204ENST00000503215 NEDD1Q8NHV4 660 aa19.36■□□□□ 0.69
SCLT1-204ENST00000503215 MKL1Q969V6 931 aa19.36■□□□□ 0.69
SCLT1-204ENST00000503215 SLF1Q9BQI6 1058 aa19.36■□□□□ 0.69
SCLT1-204ENST00000503215 RIPK3Q9Y572 518 aa19.36■□□□□ 0.69
SCLT1-204ENST00000503215 A0A0D9SFI3 127 aa19.35■□□□□ 0.69
SCLT1-204ENST00000503215 SLC25A27O95847 323 aa19.35■□□□□ 0.69
SCLT1-204ENST00000503215 FCER1AP12319 257 aa19.35■□□□□ 0.69
SCLT1-204ENST00000503215 SYN1P17600 705 aa19.35■□□□□ 0.69
SCLT1-204ENST00000503215 SMC5Q8IY18 1101 aa19.35■□□□□ 0.69
SCLT1-204ENST00000503215 ABRAQ8N0Z2 381 aa19.35■□□□□ 0.69
SCLT1-204ENST00000503215 MMP19Q99542 508 aa19.35■□□□□ 0.69
SCLT1-204ENST00000503215 PDE4BQ07343 736 aa19.34■□□□□ 0.69
SCLT1-204ENST00000503215 LRRC26Q2I0M4 334 aa19.34■□□□□ 0.69
SCLT1-204ENST00000503215 MAML3Q96JK9 1138 aa19.34■□□□□ 0.69
SCLT1-204ENST00000503215 ZNF287Q9HBT7 754 aa19.34■□□□□ 0.69
SCLT1-204ENST00000503215 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.34■□□□□ 0.69
SCLT1-204ENST00000503215 ZNF236Q9UL36 1845 aa19.34■□□□□ 0.69
SCLT1-204ENST00000503215 ZNFX1Q9P2E3 1918 aaKnown RBP19.33■□□□□ 0.69
SCLT1-204ENST00000503215 NMT2O60551 498 aa19.33■□□□□ 0.69
SCLT1-204ENST00000503215 TTLL1O95922 423 aa19.33■□□□□ 0.69
SCLT1-204ENST00000503215 TSPY3P0CV98 308 aa19.33■□□□□ 0.69
SCLT1-204ENST00000503215 TSPY8P0CW00 308 aa19.33■□□□□ 0.69
SCLT1-204ENST00000503215 IL17RBQ9NRM6 502 aa19.33■□□□□ 0.69
SCLT1-204ENST00000503215 PLIN4Q96Q06 1357 aa19.33■□□□□ 0.68
SCLT1-204ENST00000503215 SLC4A3P48751 1232 aa19.32■□□□□ 0.68
SCLT1-204ENST00000503215 ZNF792Q3KQV3 632 aa19.32■□□□□ 0.68
SCLT1-204ENST00000503215 SLFN13Q68D06 897 aa19.32■□□□□ 0.68
SCLT1-204ENST00000503215 RASGRP2Q7LDG7 609 aa19.32■□□□□ 0.68
SCLT1-204ENST00000503215 ZNF589Q86UQ0 364 aaPredicted RBP19.32■□□□□ 0.68
SCLT1-204ENST00000503215 CPXCR1Q8N123 301 aa19.32■□□□□ 0.68
SCLT1-204ENST00000503215 PRPF38AQ8NAV1 312 aaKnown RBP19.32■□□□□ 0.68
SCLT1-204ENST00000503215 KIFC2Q96AC6 838 aa19.32■□□□□ 0.68
SCLT1-204ENST00000503215 RWDD1Q9H446 243 aaPredicted RBP19.32■□□□□ 0.68
SCLT1-204ENST00000503215 HELLSQ9NRZ9 838 aa19.32■□□□□ 0.68
SCLT1-204ENST00000503215 MYH4Q9Y623 1939 aa19.32■□□□□ 0.68
SCLT1-204ENST00000503215 SLC3A2P08195 630 aaKnown RBP19.32■□□□□ 0.68
SCLT1-204ENST00000503215 TAL1P17542 331 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms