RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 EGFRP00533 1210 aa10.46□□□□□ -0.73
NR1I3-216ENST00000502848 EEF2P13639 858 aaKnown RBP10.46□□□□□ -0.73
NR1I3-216ENST00000502848 NCLP19338 710 aaKnown RBP10.46□□□□□ -0.73
NR1I3-216ENST00000502848 TRAPPC10P48553 1259 aa10.46□□□□□ -0.73
NR1I3-216ENST00000502848 UBE2HP62256 183 aa10.46□□□□□ -0.73
NR1I3-216ENST00000502848 RILPL1Q5EBL4 403 aa10.46□□□□□ -0.73
NR1I3-216ENST00000502848 NOL9Q5SY16 702 aaKnown RBP10.46□□□□□ -0.73
NR1I3-216ENST00000502848 MYSM1Q5VVJ2 828 aa10.46□□□□□ -0.73
NR1I3-216ENST00000502848 MCTP2Q6DN12 878 aa10.46□□□□□ -0.73
NR1I3-216ENST00000502848 BTNL9Q6UXG8 535 aa10.46□□□□□ -0.73
NR1I3-216ENST00000502848 NOSTRINQ8IVI9 506 aa10.46□□□□□ -0.73
NR1I3-216ENST00000502848 TRPM4Q8TD43 1214 aa10.46□□□□□ -0.73
NR1I3-216ENST00000502848 LPAR1Q92633 364 aa10.46□□□□□ -0.73
NR1I3-216ENST00000502848 MTMR8Q96EF0 704 aa10.46□□□□□ -0.73
NR1I3-216ENST00000502848 BARHL2Q9NY43 387 aa10.46□□□□□ -0.73
NR1I3-216ENST00000502848 GGA3Q9NZ52 723 aa10.46□□□□□ -0.73
NR1I3-216ENST00000502848 RTEL1Q9NZ71 1219 aa10.46□□□□□ -0.73
NR1I3-216ENST00000502848 WDR90Q96KV7 1748 aa10.46□□□□□ -0.74
NR1I3-216ENST00000502848 SCN4AP35499 1836 aa10.46□□□□□ -0.74
NR1I3-216ENST00000502848 UNCXA6NJT0 531 aa10.45□□□□□ -0.74
NR1I3-216ENST00000502848 TRAK2O60296 914 aa10.45□□□□□ -0.74
NR1I3-216ENST00000502848 DDNO94850 711 aaPredicted RBP10.45□□□□□ -0.74
NR1I3-216ENST00000502848 EPS15P42566 896 aa10.45□□□□□ -0.74
NR1I3-216ENST00000502848 SLC1A4P43007 532 aa10.45□□□□□ -0.74
NR1I3-216ENST00000502848 NASPP49321 788 aaPredicted RBP10.45□□□□□ -0.74
NR1I3-216ENST00000502848 DNM1Q05193 864 aaKnown RBP10.45□□□□□ -0.74
NR1I3-216ENST00000502848 GNL2Q13823 731 aaKnown RBP10.45□□□□□ -0.74
NR1I3-216ENST00000502848 ANGEL2Q5VTE6 544 aaKnown RBP10.45□□□□□ -0.74
NR1I3-216ENST00000502848 USP48Q86UV5 1035 aa10.45□□□□□ -0.74
NR1I3-216ENST00000502848 FERMT3Q86UX7 667 aa10.45□□□□□ -0.74
NR1I3-216ENST00000502848 PNMA8AQ86V59 439 aaPredicted RBP10.45□□□□□ -0.74
NR1I3-216ENST00000502848 SIAH1Q8IUQ4 282 aa10.45□□□□□ -0.74
NR1I3-216ENST00000502848 DIS3L2Q8IYB7 885 aaKnown RBP10.45□□□□□ -0.74
NR1I3-216ENST00000502848 LRRC47Q8N1G4 583 aaKnown RBP10.45□□□□□ -0.74
NR1I3-216ENST00000502848 STAG2Q8N3U4 1231 aa10.45□□□□□ -0.74
NR1I3-216ENST00000502848 SPDYE1Q8NFV5 336 aaPredicted RBP10.45□□□□□ -0.74
NR1I3-216ENST00000502848 BICD2Q8TD16 824 aa10.45□□□□□ -0.74
NR1I3-216ENST00000502848 KCNG4Q8TDN1 519 aa10.45□□□□□ -0.74
NR1I3-216ENST00000502848 KIAA1683Q9H0B3 1180 aa10.45□□□□□ -0.74
NR1I3-216ENST00000502848 RCOR1Q9UKL0 485 aa10.45□□□□□ -0.74
NR1I3-216ENST00000502848 PNMA2Q9UL42 364 aa10.45□□□□□ -0.74
NR1I3-216ENST00000502848 PNMA6FA0A0J9YX94 578 aa10.44□□□□□ -0.74
NR1I3-216ENST00000502848 FAM196BA6NMK8 535 aa10.44□□□□□ -0.74
NR1I3-216ENST00000502848 USP17L5A8MUK1 530 aa10.44□□□□□ -0.74
NR1I3-216ENST00000502848 F5H6K3 240 aa10.44□□□□□ -0.74
NR1I3-216ENST00000502848 CYTH3O43739 400 aa10.44□□□□□ -0.74
NR1I3-216ENST00000502848 GDF11O95390 407 aa10.44□□□□□ -0.74
NR1I3-216ENST00000502848 GNA11P29992 359 aa10.44□□□□□ -0.74
NR1I3-216ENST00000502848 KRT2P35908 639 aa10.44□□□□□ -0.74
NR1I3-216ENST00000502848 HIRAP54198 1017 aaPredicted RBP10.44□□□□□ -0.74
NR1I3-216ENST00000502848 USP14P54578 494 aa10.44□□□□□ -0.74
NR1I3-216ENST00000502848 KLRC3Q07444 240 aa10.44□□□□□ -0.74
NR1I3-216ENST00000502848 ORC2Q13416 577 aaPredicted RBP10.44□□□□□ -0.74
NR1I3-216ENST00000502848 SLFN13Q68D06 897 aa10.44□□□□□ -0.74
NR1I3-216ENST00000502848 USP17L2Q6R6M4 530 aa10.44□□□□□ -0.74
NR1I3-216ENST00000502848 FAM160B2Q86V87 743 aa10.44□□□□□ -0.74
NR1I3-216ENST00000502848 SULF1Q8IWU6 871 aa10.44□□□□□ -0.74
NR1I3-216ENST00000502848 JMYQ8N9B5 988 aa10.44□□□□□ -0.74
NR1I3-216ENST00000502848 LEO1Q8WVC0 666 aaPredicted RBP10.44□□□□□ -0.74
NR1I3-216ENST00000502848 SYAP1Q96A49 352 aaPredicted RBP10.44□□□□□ -0.74
NR1I3-216ENST00000502848 DCPSQ96C86 337 aaKnown RBP10.44□□□□□ -0.74
NR1I3-216ENST00000502848 SPATA32Q96LK8 384 aa10.44□□□□□ -0.74
NR1I3-216ENST00000502848 WDR18Q9BV38 432 aa10.44□□□□□ -0.74
NR1I3-216ENST00000502848 ZMYND12Q9H0C1 365 aa10.44□□□□□ -0.74
NR1I3-216ENST00000502848 VCPKMTQ9H867 229 aa10.44□□□□□ -0.74
NR1I3-216ENST00000502848 AS3MTQ9HBK9 375 aa10.44□□□□□ -0.74
NR1I3-216ENST00000502848 ISY1Q9ULR0 285 aaKnown RBP10.44□□□□□ -0.74
NR1I3-216ENST00000502848 CEP131Q9UPN4 1083 aa10.44□□□□□ -0.74
NR1I3-216ENST00000502848 CLEC11AQ9Y240 323 aa10.44□□□□□ -0.74
NR1I3-216ENST00000502848 MYH15Q9Y2K3 1946 aa10.43□□□□□ -0.74
NR1I3-216ENST00000502848 MYH4Q9Y623 1939 aa10.43□□□□□ -0.74
NR1I3-216ENST00000502848 DOCK1Q14185 1865 aa10.43□□□□□ -0.74
NR1I3-216ENST00000502848 ZBTB5O15062 677 aa10.43□□□□□ -0.74
NR1I3-216ENST00000502848 PRPF40AO75400 957 aaKnown RBP10.43□□□□□ -0.74
NR1I3-216ENST00000502848 NDUFB10O96000 172 aa10.43□□□□□ -0.74
NR1I3-216ENST00000502848 FDX1P10109 184 aa10.43□□□□□ -0.74
NR1I3-216ENST00000502848 BMP3P12645 472 aa10.43□□□□□ -0.74
NR1I3-216ENST00000502848 NBR1Q14596 966 aa10.43□□□□□ -0.74
NR1I3-216ENST00000502848 RRP1BQ14684 758 aaKnown RBP10.43□□□□□ -0.74
NR1I3-216ENST00000502848 NPY5RQ15761 445 aa10.43□□□□□ -0.74
NR1I3-216ENST00000502848 FOXD4L5Q5VV16 416 aaPredicted RBP10.43□□□□□ -0.74
NR1I3-216ENST00000502848 SCYL3Q8IZE3 742 aa10.43□□□□□ -0.74
NR1I3-216ENST00000502848 CHURC1Q8WUH1 139 aa10.43□□□□□ -0.74
NR1I3-216ENST00000502848 FOXD4L4Q8WXT5 416 aaPredicted RBP10.43□□□□□ -0.74
NR1I3-216ENST00000502848 AIFM3Q96NN9 605 aa10.43□□□□□ -0.74
NR1I3-216ENST00000502848 MAF1Q9H063 256 aa10.43□□□□□ -0.74
NR1I3-216ENST00000502848 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.43□□□□□ -0.74
NR1I3-216ENST00000502848 NOL7Q9UMY1 257 aaKnown RBP10.43□□□□□ -0.74
NR1I3-216ENST00000502848 PCDHA4Q9UN74 947 aa10.43□□□□□ -0.74
NR1I3-216ENST00000502848 CNPY2Q9Y2B0 182 aa10.43□□□□□ -0.74
NR1I3-216ENST00000502848 DDX49Q9Y6V7 483 aaKnown RBP10.43□□□□□ -0.74
NR1I3-216ENST00000502848 STXBP3O00186 592 aa10.42□□□□□ -0.74
NR1I3-216ENST00000502848 WDR46O15213 610 aaKnown RBP10.42□□□□□ -0.74
NR1I3-216ENST00000502848 FIBPO43427 364 aa10.42□□□□□ -0.74
NR1I3-216ENST00000502848 PPP6R2O75170 966 aa10.42□□□□□ -0.74
NR1I3-216ENST00000502848 EPHX2P34913 555 aa10.42□□□□□ -0.74
NR1I3-216ENST00000502848 NF2P35240 595 aa10.42□□□□□ -0.74
NR1I3-216ENST00000502848 STAT2P52630 851 aa10.42□□□□□ -0.74
NR1I3-216ENST00000502848 NLRP5P59047 1200 aa10.42□□□□□ -0.74
NR1I3-216ENST00000502848 GUCY1B3Q02153 619 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms