RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ZKSCAN1P17029 563 aaPredicted RBP29.52■■■□□ 2.32
LSM6-202ENST00000502781 MTA3Q9BTC8 594 aa29.52■■■□□ 2.32
LSM6-202ENST00000502781 FBXO28Q9NVF7 368 aa29.52■■■□□ 2.32
LSM6-202ENST00000502781 ADAMTS5Q9UNA0 930 aa29.52■■■□□ 2.32
LSM6-202ENST00000502781 BMP3P12645 472 aa29.51■■■□□ 2.31
LSM6-202ENST00000502781 MCCP23508 829 aa29.51■■■□□ 2.31
LSM6-202ENST00000502781 RABGAP1Q9Y3P9 1069 aa29.51■■■□□ 2.31
LSM6-202ENST00000502781 CNMDO75829 334 aa29.5■■■□□ 2.31
LSM6-202ENST00000502781 SNHG28P0DPA3 235 aa29.5■■■□□ 2.31
LSM6-202ENST00000502781 KRT32Q14532 448 aa29.5■■■□□ 2.31
LSM6-202ENST00000502781 RASGRP2Q7LDG7 609 aa29.5■■■□□ 2.31
LSM6-202ENST00000502781 CD99L2Q8TCZ2 262 aa29.5■■■□□ 2.31
LSM6-202ENST00000502781 DCAF4Q8WV16 495 aa29.5■■■□□ 2.31
LSM6-202ENST00000502781 PPP1R9AQ9ULJ8 1098 aa29.5■■■□□ 2.31
LSM6-202ENST00000502781 MCM5P33992 734 aa29.49■■■□□ 2.31
LSM6-202ENST00000502781 SLC1A4P43007 532 aa29.49■■■□□ 2.31
LSM6-202ENST00000502781 ADCK5Q3MIX3 580 aa29.49■■■□□ 2.31
LSM6-202ENST00000502781 CHST3Q7LGC8 479 aa29.49■■■□□ 2.31
LSM6-202ENST00000502781 IGDCC4Q8TDY8 1250 aa29.49■■■□□ 2.31
LSM6-202ENST00000502781 SNX14Q9Y5W7 946 aa29.49■■■□□ 2.31
LSM6-202ENST00000502781 PEX10O60683 326 aa29.48■■■□□ 2.31
LSM6-202ENST00000502781 PLA2G6O60733 806 aa29.48■■■□□ 2.31
LSM6-202ENST00000502781 PDHBP11177 359 aa29.48■■■□□ 2.31
LSM6-202ENST00000502781 CTGFP29279 349 aa29.48■■■□□ 2.31
LSM6-202ENST00000502781 C8orf34Q49A92 452 aa29.48■■■□□ 2.31
LSM6-202ENST00000502781 MB21D1Q8N884 522 aa29.48■■■□□ 2.31
LSM6-202ENST00000502781 PNMA1Q8ND90 353 aa29.48■■■□□ 2.31
LSM6-202ENST00000502781 ATG4CQ96DT6 458 aa29.48■■■□□ 2.31
LSM6-202ENST00000502781 NEK1Q96PY6 1258 aa29.48■■■□□ 2.31
LSM6-202ENST00000502781 FEM1BQ9UK73 627 aa29.48■■■□□ 2.31
LSM6-202ENST00000502781 PARP14Q460N5 1801 aa29.47■■■□□ 2.31
LSM6-202ENST00000502781 IFIT3O14879 490 aaKnown RBP29.47■■■□□ 2.31
LSM6-202ENST00000502781 EIF5BO60841 1220 aaKnown RBP29.47■■■□□ 2.31
LSM6-202ENST00000502781 ERVK-9P63128 1117 aa29.47■■■□□ 2.31
LSM6-202ENST00000502781 ERVK-24P63145 666 aa29.47■■■□□ 2.31
LSM6-202ENST00000502781 SART3Q15020 963 aaKnown RBP29.47■■■□□ 2.31
LSM6-202ENST00000502781 Q3C1V9 767 aa29.47■■■□□ 2.31
LSM6-202ENST00000502781 IFIT1BQ5T764 474 aaKnown RBP29.47■■■□□ 2.31
LSM6-202ENST00000502781 GPRC5AQ8NFJ5 357 aa29.47■■■□□ 2.31
LSM6-202ENST00000502781 SLF1Q9BQI6 1058 aa29.47■■■□□ 2.31
LSM6-202ENST00000502781 ARHGAP39Q9C0H5 1083 aa29.47■■■□□ 2.31
LSM6-202ENST00000502781 KAT14Q9H8E8 782 aa29.47■■■□□ 2.31
LSM6-202ENST00000502781 BTBD7Q9P203 1132 aa29.47■■■□□ 2.31
LSM6-202ENST00000502781 PRC1O43663 620 aa29.46■■■□□ 2.31
LSM6-202ENST00000502781 COL13A1Q5TAT6 717 aaPredicted RBP29.46■■■□□ 2.31
LSM6-202ENST00000502781 PRPF38AQ8NAV1 312 aaKnown RBP29.46■■■□□ 2.31
LSM6-202ENST00000502781 PAGR1Q9BTK6 254 aa29.46■■■□□ 2.31
LSM6-202ENST00000502781 A0A0G2JMZ2 1700 aa29.45■■■□□ 2.31
LSM6-202ENST00000502781 TMEM232C9JQI7 657 aa29.45■■■□□ 2.31
LSM6-202ENST00000502781 CTU1Q7Z7A3 348 aaKnown RBP29.45■■■□□ 2.31
LSM6-202ENST00000502781 SENP2Q9HC62 589 aa29.45■■■□□ 2.31
LSM6-202ENST00000502781 WDR19Q8NEZ3 1342 aa29.45■■■□□ 2.3
LSM6-202ENST00000502781 ERICH2A1L162 156 aa29.44■■■□□ 2.3
LSM6-202ENST00000502781 VWA5AO00534 786 aa29.44■■■□□ 2.3
LSM6-202ENST00000502781 EXOSC10Q01780 885 aaKnown RBP29.44■■■□□ 2.3
LSM6-202ENST00000502781 KIF22Q14807 665 aa29.44■■■□□ 2.3
LSM6-202ENST00000502781 TMEM67Q5HYA8 995 aa29.44■■■□□ 2.3
LSM6-202ENST00000502781 KCTD1Q719H9 257 aa29.44■■■□□ 2.3
LSM6-202ENST00000502781 REPS2Q8NFH8 660 aa29.44■■■□□ 2.3
LSM6-202ENST00000502781 TMEM87BQ96K49 555 aa29.44■■■□□ 2.3
LSM6-202ENST00000502781 TRIM47Q96LD4 638 aa29.44■■■□□ 2.3
LSM6-202ENST00000502781 SEC24BO95487 1268 aa29.43■■■□□ 2.3
LSM6-202ENST00000502781 GNRH1P01148 92 aa29.43■■■□□ 2.3
LSM6-202ENST00000502781 PSMC4P43686 418 aa29.43■■■□□ 2.3
LSM6-202ENST00000502781 STAT2P52630 851 aa29.43■■■□□ 2.3
LSM6-202ENST00000502781 ZNF543Q08ER8 600 aa29.43■■■□□ 2.3
LSM6-202ENST00000502781 WTAPQ15007 396 aa29.43■■■□□ 2.3
LSM6-202ENST00000502781 BTNL9Q6UXG8 535 aa29.43■■■□□ 2.3
LSM6-202ENST00000502781 OTOP1Q7RTM1 612 aa29.43■■■□□ 2.3
LSM6-202ENST00000502781 FAM160B2Q86V87 743 aa29.43■■■□□ 2.3
LSM6-202ENST00000502781 CHURC1Q8WUH1 139 aa29.43■■■□□ 2.3
LSM6-202ENST00000502781 LY9Q9HBG7 655 aa29.43■■■□□ 2.3
LSM6-202ENST00000502781 MTMR7Q9Y216 660 aa29.43■■■□□ 2.3
LSM6-202ENST00000502781 SH2B2O14492 632 aaPredicted RBP29.42■■■□□ 2.3
LSM6-202ENST00000502781 HMGB1P09429 215 aaKnown RBP29.42■■■□□ 2.3
LSM6-202ENST00000502781 ARHGEF6Q15052 776 aa29.42■■■□□ 2.3
LSM6-202ENST00000502781 DHX32Q7L7V1 743 aaKnown RBP29.42■■■□□ 2.3
LSM6-202ENST00000502781 CHMP4CQ96CF2 233 aa29.42■■■□□ 2.3
LSM6-202ENST00000502781 EFCC1Q9HA90 598 aa29.42■■■□□ 2.3
LSM6-202ENST00000502781 LIFRP42702 1097 aa29.41■■■□□ 2.3
LSM6-202ENST00000502781 FCGRTP55899 365 aa29.41■■■□□ 2.3
LSM6-202ENST00000502781 CCDC96Q2M329 555 aa29.41■■■□□ 2.3
LSM6-202ENST00000502781 GPHNQ9NQX3 736 aaPredicted RBP29.41■■■□□ 2.3
LSM6-202ENST00000502781 TMEM132BQ14DG7 1078 aa29.4■■■□□ 2.3
LSM6-202ENST00000502781 GPATCH4Q5T3I0 446 aaKnown RBP29.4■■■□□ 2.3
LSM6-202ENST00000502781 PORCNQ9H237 461 aa29.4■■■□□ 2.3
LSM6-202ENST00000502781 SLC38A10Q9HBR0 1119 aa29.4■■■□□ 2.3
LSM6-202ENST00000502781 ZNF214Q9UL59 606 aaPredicted RBP29.4■■■□□ 2.3
LSM6-202ENST00000502781 TRIM17Q9Y577 477 aa29.4■■■□□ 2.3
LSM6-202ENST00000502781 FDX1P10109 184 aa29.39■■■□□ 2.3
LSM6-202ENST00000502781 CCNA1P78396 465 aa29.39■■■□□ 2.3
LSM6-202ENST00000502781 TROAPQ12815 778 aa29.39■■■□□ 2.3
LSM6-202ENST00000502781 TTBK2Q6IQ55 1244 aa29.39■■■□□ 2.3
LSM6-202ENST00000502781 SAMD1Q6SPF0 538 aaPredicted RBP29.39■■■□□ 2.3
LSM6-202ENST00000502781 TMTC2Q8N394 836 aa29.39■■■□□ 2.3
LSM6-202ENST00000502781 KIFC2Q96AC6 838 aa29.39■■■□□ 2.3
LSM6-202ENST00000502781 JAKMIP1Q96N16 626 aaKnown RBP29.39■■■□□ 2.3
LSM6-202ENST00000502781 SPATC1LQ9H0A9 340 aa29.39■■■□□ 2.3
LSM6-202ENST00000502781 ATP2A1O14983 1001 aa29.39■■■□□ 2.29
LSM6-202ENST00000502781 MOV10L1Q9BXT6 1211 aaKnown RBP29.39■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms