RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 RAET1EQ8TD07 263 aa12.78□□□□□ -0.36
CDK11A-222ENST00000498810 APPBP2Q92624 585 aa12.78□□□□□ -0.36
CDK11A-222ENST00000498810 CWC22Q9HCG8 908 aaKnown RBP12.78□□□□□ -0.36
CDK11A-222ENST00000498810 SWAP70Q9UH65 585 aa12.78□□□□□ -0.36
CDK11A-222ENST00000498810 PTPN22Q9Y2R2 807 aa12.78□□□□□ -0.36
CDK11A-222ENST00000498810 RBBP6Q7Z6E9 1792 aaKnown RBP12.78□□□□□ -0.36
CDK11A-222ENST00000498810 C19orf81C9J6K1 198 aa12.77□□□□□ -0.37
CDK11A-222ENST00000498810 RNF113AO15541 343 aaKnown RBP12.77□□□□□ -0.37
CDK11A-222ENST00000498810 PRKAB2O43741 272 aa12.77□□□□□ -0.37
CDK11A-222ENST00000498810 TDO2P48775 406 aa12.77□□□□□ -0.37
CDK11A-222ENST00000498810 PLCD1P51178 756 aa12.77□□□□□ -0.37
CDK11A-222ENST00000498810 MLLT1Q03111 559 aaPredicted RBP12.77□□□□□ -0.37
CDK11A-222ENST00000498810 MAP2K5Q13163 448 aa12.77□□□□□ -0.37
CDK11A-222ENST00000498810 MOGSQ13724 837 aa12.77□□□□□ -0.37
CDK11A-222ENST00000498810 B4GALNT3Q6L9W6 998 aa12.77□□□□□ -0.37
CDK11A-222ENST00000498810 C17orf99Q6UX52 265 aa12.77□□□□□ -0.37
CDK11A-222ENST00000498810 METTL16Q86W50 562 aaKnown RBP12.77□□□□□ -0.37
CDK11A-222ENST00000498810 CCAR1Q8IX12 1150 aaKnown RBP12.77□□□□□ -0.37
CDK11A-222ENST00000498810 ANKRD13CQ8N6S4 541 aa12.77□□□□□ -0.37
CDK11A-222ENST00000498810 EXOC6Q8TAG9 804 aa12.77□□□□□ -0.37
CDK11A-222ENST00000498810 OTUD7AQ8TE49 926 aaPredicted RBP12.77□□□□□ -0.37
CDK11A-222ENST00000498810 WDR18Q9BV38 432 aa12.77□□□□□ -0.37
CDK11A-222ENST00000498810 ARHGAP39Q9C0H5 1083 aa12.77□□□□□ -0.37
CDK11A-222ENST00000498810 ARPP21Q9UBL0 812 aaPredicted RBP12.77□□□□□ -0.37
CDK11A-222ENST00000498810 PTCH2Q9Y6C5 1203 aa12.77□□□□□ -0.37
CDK11A-222ENST00000498810 MYPNQ86TC9 1320 aa12.77□□□□□ -0.37
CDK11A-222ENST00000498810 MYH4Q9Y623 1939 aa12.76□□□□□ -0.37
CDK11A-222ENST00000498810 TNPO2O14787 897 aaKnown RBP12.76□□□□□ -0.37
CDK11A-222ENST00000498810 CYP2D6P10635 497 aa12.76□□□□□ -0.37
CDK11A-222ENST00000498810 GNAT2P19087 354 aa12.76□□□□□ -0.37
CDK11A-222ENST00000498810 USP14P54578 494 aa12.76□□□□□ -0.37
CDK11A-222ENST00000498810 PRMT2P55345 433 aa12.76□□□□□ -0.37
CDK11A-222ENST00000498810 BACE1P56817 501 aa12.76□□□□□ -0.37
CDK11A-222ENST00000498810 SHROOM1Q2M3G4 852 aaPredicted RBP12.76□□□□□ -0.37
CDK11A-222ENST00000498810 USP17L2Q6R6M4 530 aa12.76□□□□□ -0.37
CDK11A-222ENST00000498810 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.76□□□□□ -0.37
CDK11A-222ENST00000498810 TMUB1Q9BVT8 246 aa12.76□□□□□ -0.37
CDK11A-222ENST00000498810 LNPKQ9C0E8 428 aa12.76□□□□□ -0.37
CDK11A-222ENST00000498810 PUS7LQ9H0K6 701 aaKnown RBP12.76□□□□□ -0.37
CDK11A-222ENST00000498810 BIN2Q9UBW5 565 aaPredicted RBP12.76□□□□□ -0.37
CDK11A-222ENST00000498810 ADGRA2Q96PE1 1338 aa12.76□□□□□ -0.37
CDK11A-222ENST00000498810 USP17L12C9JPN9 530 aa12.75□□□□□ -0.37
CDK11A-222ENST00000498810 USP17L21D6R901 530 aa12.75□□□□□ -0.37
CDK11A-222ENST00000498810 GPAA1O43292 621 aa12.75□□□□□ -0.37
CDK11A-222ENST00000498810 MYCP01106 439 aaPredicted RBP12.75□□□□□ -0.37
CDK11A-222ENST00000498810 CHGBP05060 677 aa12.75□□□□□ -0.37
CDK11A-222ENST00000498810 SHMT1P34896 483 aa12.75□□□□□ -0.37
CDK11A-222ENST00000498810 GCLCP48506 637 aaPredicted RBP12.75□□□□□ -0.37
CDK11A-222ENST00000498810 IRX6P78412 446 aaPredicted RBP12.75□□□□□ -0.37
CDK11A-222ENST00000498810 SH3D19Q5HYK7 790 aa12.75□□□□□ -0.37
CDK11A-222ENST00000498810 TATDN1Q6P1N9 297 aa12.75□□□□□ -0.37
CDK11A-222ENST00000498810 STK11IPQ8N1F8 1099 aa12.75□□□□□ -0.37
CDK11A-222ENST00000498810 SLC44A5Q8NCS7 719 aa12.75□□□□□ -0.37
CDK11A-222ENST00000498810 PI4K2BQ8TCG2 481 aa12.75□□□□□ -0.37
CDK11A-222ENST00000498810 COA7Q96BR5 231 aa12.75□□□□□ -0.37
CDK11A-222ENST00000498810 NACAP1Q9BZK3 213 aa12.75□□□□□ -0.37
CDK11A-222ENST00000498810 ASCC2Q9H1I8 757 aaPredicted RBP12.75□□□□□ -0.37
CDK11A-222ENST00000498810 SH2D4AQ9H788 454 aa12.75□□□□□ -0.37
CDK11A-222ENST00000498810 ARHGEF10LQ9HCE6 1279 aa12.75□□□□□ -0.37
CDK11A-222ENST00000498810 MINDY4BA8MYZ0 360 aa12.74□□□□□ -0.37
CDK11A-222ENST00000498810 RAD21O60216 631 aa12.74□□□□□ -0.37
CDK11A-222ENST00000498810 BCRP11274 1271 aa12.74□□□□□ -0.37
CDK11A-222ENST00000498810 ATP2B2Q01814 1243 aa12.74□□□□□ -0.37
CDK11A-222ENST00000498810 SEPT2Q15019 361 aa12.74□□□□□ -0.37
CDK11A-222ENST00000498810 FAM110CQ1W6H9 321 aa12.74□□□□□ -0.37
CDK11A-222ENST00000498810 TMEM179Q6ZVK1 233 aa12.74□□□□□ -0.37
CDK11A-222ENST00000498810 DYNLL2Q96FJ2 89 aa12.74□□□□□ -0.37
CDK11A-222ENST00000498810 TRIM47Q96LD4 638 aa12.74□□□□□ -0.37
CDK11A-222ENST00000498810 PAGR1Q9BTK6 254 aa12.74□□□□□ -0.37
CDK11A-222ENST00000498810 SRRDQ9UH36 339 aa12.74□□□□□ -0.37
CDK11A-222ENST00000498810 CYP2D7A0A087X1C5 515 aa12.73□□□□□ -0.37
CDK11A-222ENST00000498810 DDX11L8A8MPP1 907 aa12.73□□□□□ -0.37
CDK11A-222ENST00000498810 M0R2C6 588 aa12.73□□□□□ -0.37
CDK11A-222ENST00000498810 TLL1O43897 1013 aa12.73□□□□□ -0.37
CDK11A-222ENST00000498810 GGCXP38435 758 aa12.73□□□□□ -0.37
CDK11A-222ENST00000498810 JAG1P78504 1218 aa12.73□□□□□ -0.37
CDK11A-222ENST00000498810 ICA1Q05084 483 aa12.73□□□□□ -0.37
CDK11A-222ENST00000498810 GTF3C2Q8WUA4 911 aaPredicted RBP12.73□□□□□ -0.37
CDK11A-222ENST00000498810 OSBP2Q969R2 916 aa12.73□□□□□ -0.37
CDK11A-222ENST00000498810 RILPL2Q969X0 211 aa12.73□□□□□ -0.37
CDK11A-222ENST00000498810 EVI5LQ96CN4 794 aa12.73□□□□□ -0.37
CDK11A-222ENST00000498810 PRKD2Q9BZL6 878 aa12.73□□□□□ -0.37
CDK11A-222ENST00000498810 TANGO6Q9C0B7 1094 aa12.73□□□□□ -0.37
CDK11A-222ENST00000498810 NAPBQ9H115 298 aa12.73□□□□□ -0.37
CDK11A-222ENST00000498810 MKNK2Q9HBH9 465 aa12.73□□□□□ -0.37
CDK11A-222ENST00000498810 ZNF287Q9HBT7 754 aa12.73□□□□□ -0.37
CDK11A-222ENST00000498810 DOCK3Q8IZD9 2030 aa12.72□□□□□ -0.37
CDK11A-222ENST00000498810 SLC3A2P08195 630 aaKnown RBP12.72□□□□□ -0.37
CDK11A-222ENST00000498810 CDK8P49336 464 aa12.72□□□□□ -0.37
CDK11A-222ENST00000498810 PDE1AP54750 535 aa12.72□□□□□ -0.37
CDK11A-222ENST00000498810 HERVK_113P62684 666 aa12.72□□□□□ -0.37
CDK11A-222ENST00000498810 PRKCZQ05513 592 aa12.72□□□□□ -0.37
CDK11A-222ENST00000498810 GABPAQ06546 454 aa12.72□□□□□ -0.37
CDK11A-222ENST00000498810 C12orf60Q5U649 245 aa12.72□□□□□ -0.37
CDK11A-222ENST00000498810 WDR78Q5VTH9 848 aa12.72□□□□□ -0.37
CDK11A-222ENST00000498810 CTR9Q6PD62 1173 aa12.72□□□□□ -0.37
CDK11A-222ENST00000498810 C16orf86Q6ZW13 317 aa12.72□□□□□ -0.37
CDK11A-222ENST00000498810 SH3TC2Q8TF17 1288 aa12.72□□□□□ -0.37
CDK11A-222ENST00000498810 CCDC17Q96LX7 622 aa12.72□□□□□ -0.37
CDK11A-222ENST00000498810 STRBPQ96SI9 672 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms