RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 TMEM179Q6ZVK1 233 aa14.15□□□□□ -0.14
CDK9-205ENST00000498339 TRMT2AQ8IZ69 625 aaKnown RBP14.15□□□□□ -0.14
CDK9-205ENST00000498339 SH2D4AQ9H788 454 aa14.15□□□□□ -0.14
CDK9-205ENST00000498339 NRBP1Q9UHY1 535 aa14.15□□□□□ -0.14
CDK9-205ENST00000498339 TNNQ9UQP3 1299 aa14.15□□□□□ -0.14
CDK9-205ENST00000498339 CNPY2Q9Y2B0 182 aa14.15□□□□□ -0.14
CDK9-205ENST00000498339 MCM3APO60318 1980 aa14.14□□□□□ -0.15
CDK9-205ENST00000498339 TCF20Q9UGU0 1960 aaKnown RBP14.14□□□□□ -0.15
CDK9-205ENST00000498339 RAD21O60216 631 aa14.14□□□□□ -0.15
CDK9-205ENST00000498339 SLC25A27O95847 323 aa14.14□□□□□ -0.15
CDK9-205ENST00000498339 ICA1Q05084 483 aa14.14□□□□□ -0.15
CDK9-205ENST00000498339 CCDC174Q6PII3 467 aa14.14□□□□□ -0.15
CDK9-205ENST00000498339 CLEC10AQ8IUN9 316 aa14.14□□□□□ -0.15
CDK9-205ENST00000498339 ADAMTS19Q8TE59 1207 aa14.14□□□□□ -0.15
CDK9-205ENST00000498339 NUP133Q8WUM0 1156 aa14.14□□□□□ -0.15
CDK9-205ENST00000498339 ATXN2LQ8WWM7 1075 aaKnown RBP14.14□□□□□ -0.15
CDK9-205ENST00000498339 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.14□□□□□ -0.154e-15■■□□□ 12.9
CDK9-205ENST00000498339 CRNKL1Q9BZJ0 848 aaKnown RBP14.14□□□□□ -0.15
CDK9-205ENST00000498339 PRDM12Q9H4Q4 367 aa14.14□□□□□ -0.15
CDK9-205ENST00000498339 ANTXR1Q9H6X2 564 aa14.14□□□□□ -0.15
CDK9-205ENST00000498339 ROBO3Q96MS0 1386 aa14.13□□□□□ -0.15
CDK9-205ENST00000498339 BCAR3O75815 825 aa14.13□□□□□ -0.15
CDK9-205ENST00000498339 TAL1P17542 331 aaPredicted RBP14.13□□□□□ -0.15
CDK9-205ENST00000498339 IGFBP4P22692 258 aa14.13□□□□□ -0.15
CDK9-205ENST00000498339 EVX2Q03828 476 aa14.13□□□□□ -0.15
CDK9-205ENST00000498339 FAAP100Q0VG06 881 aa14.13□□□□□ -0.15
CDK9-205ENST00000498339 POLA2Q14181 598 aa14.13□□□□□ -0.15
CDK9-205ENST00000498339 CCDC85BQ15834 202 aaPredicted RBP14.13□□□□□ -0.15
CDK9-205ENST00000498339 KIAA1755Q5JYT7 1200 aa14.13□□□□□ -0.15
CDK9-205ENST00000498339 TINF2Q9BSI4 451 aa14.13□□□□□ -0.15
CDK9-205ENST00000498339 C1orf115Q9H7X2 142 aa14.13□□□□□ -0.15
CDK9-205ENST00000498339 MROH7Q68CQ1 1323 aa14.13□□□□□ -0.15
CDK9-205ENST00000498339 ZNF316A6NFI3 1004 aaPredicted RBP14.12□□□□□ -0.15
CDK9-205ENST00000498339 WDR46O15213 610 aaKnown RBP14.12□□□□□ -0.15
CDK9-205ENST00000498339 TIMP1P01033 207 aa14.12□□□□□ -0.15
CDK9-205ENST00000498339 PBX2P40425 430 aa14.12□□□□□ -0.15
CDK9-205ENST00000498339 ACLYP53396 1101 aa14.12□□□□□ -0.15
CDK9-205ENST00000498339 GABPAQ06546 454 aa14.12□□□□□ -0.15
CDK9-205ENST00000498339 PPIGQ13427 754 aaKnown RBP eCLIP14.12□□□□□ -0.151e-6■□□□□ 10.6
CDK9-205ENST00000498339 TMEM132BQ14DG7 1078 aa14.12□□□□□ -0.15
CDK9-205ENST00000498339 ANKRD33Q7Z3H0 272 aa14.12□□□□□ -0.15
CDK9-205ENST00000498339 VTI1AQ96AJ9 217 aa14.12□□□□□ -0.15
CDK9-205ENST00000498339 FAM122AQ96E09 287 aa14.12□□□□□ -0.15
CDK9-205ENST00000498339 ASB2Q96Q27 587 aa14.12□□□□□ -0.15
CDK9-205ENST00000498339 UHRF1Q96T88 793 aaPredicted RBP14.12□□□□□ -0.15
CDK9-205ENST00000498339 RIOK1Q9BRS2 568 aaKnown RBP14.12□□□□□ -0.15
CDK9-205ENST00000498339 PBX4Q9BYU1 374 aa14.12□□□□□ -0.15
CDK9-205ENST00000498339 VCPKMTQ9H867 229 aa14.12□□□□□ -0.15
CDK9-205ENST00000498339 ZHX1Q9UKY1 873 aaPredicted RBP14.12□□□□□ -0.15
CDK9-205ENST00000498339 SYNRGQ9UMZ2 1314 aa14.12□□□□□ -0.15
CDK9-205ENST00000498339 MOXD2PA6NHM9 499 aa14.11□□□□□ -0.15
CDK9-205ENST00000498339 GRXCR1A8MXD5 290 aa14.11□□□□□ -0.15
CDK9-205ENST00000498339 ADAMTS4O75173 837 aa14.11□□□□□ -0.15
CDK9-205ENST00000498339 CYP2D6P10635 497 aa14.11□□□□□ -0.15
CDK9-205ENST00000498339 MRPS5P82675 430 aaKnown RBP14.11□□□□□ -0.15
CDK9-205ENST00000498339 TMED8Q6PL24 325 aaPredicted RBP14.11□□□□□ -0.15
CDK9-205ENST00000498339 SSH3Q8TE77 659 aa14.11□□□□□ -0.15
CDK9-205ENST00000498339 SDR42E1Q8WUS8 393 aa14.11□□□□□ -0.15
CDK9-205ENST00000498339 EAF2Q96CJ1 260 aaPredicted RBP14.11□□□□□ -0.15
CDK9-205ENST00000498339 GLT1D1Q96MS3 346 aa14.11□□□□□ -0.15
CDK9-205ENST00000498339 TOX2Q96NM4 488 aa14.11□□□□□ -0.15
CDK9-205ENST00000498339 TSEN34Q9BSV6 310 aaKnown RBP14.11□□□□□ -0.15
CDK9-205ENST00000498339 SWAP70Q9UH65 585 aa14.11□□□□□ -0.15
CDK9-205ENST00000498339 MSRAQ9UJ68 235 aa14.11□□□□□ -0.15
CDK9-205ENST00000498339 MYH7P12883 1935 aa14.11□□□□□ -0.15
CDK9-205ENST00000498339 ZNF865P0CJ78 1059 aaPredicted RBP14.1□□□□□ -0.15
CDK9-205ENST00000498339 AKR1B1P15121 316 aa14.1□□□□□ -0.15
CDK9-205ENST00000498339 PLA2G5P39877 138 aa14.1□□□□□ -0.15
CDK9-205ENST00000498339 ATP8B2P98198 1209 aa14.1□□□□□ -0.15
CDK9-205ENST00000498339 KCNA10Q16322 511 aa14.1□□□□□ -0.15
CDK9-205ENST00000498339 ZNF792Q3KQV3 632 aa14.1□□□□□ -0.15
CDK9-205ENST00000498339 AKNAD1Q5T1N1 836 aa14.1□□□□□ -0.15
CDK9-205ENST00000498339 SLC9C2Q5TAH2 1124 aa14.1□□□□□ -0.15
CDK9-205ENST00000498339 MFSD5Q6N075 450 aa14.1□□□□□ -0.15
CDK9-205ENST00000498339 PSRC1Q6PGN9 363 aaPredicted RBP14.1□□□□□ -0.15
CDK9-205ENST00000498339 AACSQ86V21 672 aa14.1□□□□□ -0.15
CDK9-205ENST00000498339 RIOX2Q8IUF8 465 aa14.1□□□□□ -0.15
CDK9-205ENST00000498339 MICALL1Q8N3F8 863 aa14.1□□□□□ -0.15
CDK9-205ENST00000498339 TMEM199Q8N511 208 aa14.1□□□□□ -0.15
CDK9-205ENST00000498339 TMEM57Q8N5G2 664 aa14.1□□□□□ -0.15
CDK9-205ENST00000498339 DYNLL2Q96FJ2 89 aa14.1□□□□□ -0.15
CDK9-205ENST00000498339 PPP1R12CQ9BZL4 782 aa14.1□□□□□ -0.15
CDK9-205ENST00000498339 FBXO28Q9NVF7 368 aa14.1□□□□□ -0.15
CDK9-205ENST00000498339 DIS3Q9Y2L1 958 aaKnown RBP14.1□□□□□ -0.15
CDK9-205ENST00000498339 TMX2Q9Y320 296 aa14.1□□□□□ -0.15
CDK9-205ENST00000498339 REV3LO60673 3130 aa14.1□□□□□ -0.15
CDK9-205ENST00000498339 XIRP2A4UGR9 3374 aa14.09□□□□□ -0.15
CDK9-205ENST00000498339 MYH4Q9Y623 1939 aa14.09□□□□□ -0.15
CDK9-205ENST00000498339 TLR3O15455 904 aaKnown RBP14.09□□□□□ -0.15
CDK9-205ENST00000498339 C6orf222P0C671 652 aaPredicted RBP14.09□□□□□ -0.15
CDK9-205ENST00000498339 ACRP10323 421 aa14.09□□□□□ -0.15
CDK9-205ENST00000498339 CSF2RAP15509 400 aa14.09□□□□□ -0.15
CDK9-205ENST00000498339 PDE6AP16499 860 aa14.09□□□□□ -0.15
CDK9-205ENST00000498339 COPB2P35606 906 aa14.09□□□□□ -0.15
CDK9-205ENST00000498339 STAT3P40763 770 aa14.09□□□□□ -0.15
CDK9-205ENST00000498339 SLC4A3P48751 1232 aa14.09□□□□□ -0.15
CDK9-205ENST00000498339 TTF1Q15361 905 aaPredicted RBP14.09□□□□□ -0.15
CDK9-205ENST00000498339 AMOTL1Q8IY63 956 aa14.09□□□□□ -0.15
CDK9-205ENST00000498339 TSPYL2Q9H2G4 693 aaPredicted RBP14.09□□□□□ -0.15
CDK9-205ENST00000498339 SPC25Q9HBM1 224 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms