RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 DIS3L2Q8IYB7 885 aaKnown RBP14.2□□□□□ -0.14
AFF3-215ENST00000498090 CRACR2BQ8N4Y2 399 aaPredicted RBP14.2□□□□□ -0.14
AFF3-215ENST00000498090 AGBL3Q8NEM8 1001 aa14.2□□□□□ -0.14
AFF3-215ENST00000498090 TSC1Q92574 1164 aa14.2□□□□□ -0.14
AFF3-215ENST00000498090 UBAC1Q9BSL1 405 aa14.2□□□□□ -0.14
AFF3-215ENST00000498090 RNF181Q9P0P0 153 aa14.2□□□□□ -0.14
AFF3-215ENST00000498090 BAG3O95817 575 aa14.19□□□□□ -0.14
AFF3-215ENST00000498090 SERPINC1P01008 464 aa14.19□□□□□ -0.14
AFF3-215ENST00000498090 CALM1P0DP23 149 aa14.19□□□□□ -0.14
AFF3-215ENST00000498090 CALM2P0DP24 149 aa14.19□□□□□ -0.14
AFF3-215ENST00000498090 CALM3P0DP25 149 aa14.19□□□□□ -0.14
AFF3-215ENST00000498090 RXRAP19793 462 aa14.19□□□□□ -0.14
AFF3-215ENST00000498090 EIF6P56537 245 aaKnown RBP14.19□□□□□ -0.14
AFF3-215ENST00000498090 UBASH3AP57075 661 aa14.19□□□□□ -0.14
AFF3-215ENST00000498090 HDLBPQ00341 1268 aaKnown RBP14.19□□□□□ -0.14
AFF3-215ENST00000498090 PPARAQ07869 468 aa14.19□□□□□ -0.14
AFF3-215ENST00000498090 TNIP1Q15025 636 aa14.19□□□□□ -0.14
AFF3-215ENST00000498090 FANCBQ8NB91 859 aa14.19□□□□□ -0.14
AFF3-215ENST00000498090 ZDHHC15Q96MV8 337 aa14.19□□□□□ -0.14
AFF3-215ENST00000498090 MRIQ9BWK5 157 aa14.19□□□□□ -0.14
AFF3-215ENST00000498090 SENP2Q9HC62 589 aa14.19□□□□□ -0.14
AFF3-215ENST00000498090 RBM28Q9NW13 759 aaKnown RBP14.19□□□□□ -0.14
AFF3-215ENST00000498090 SERPINA10Q9UK55 444 aa14.19□□□□□ -0.14
AFF3-215ENST00000498090 A0A087WWV3 80 aa14.18□□□□□ -0.14
AFF3-215ENST00000498090 AKAP17AQ02040 695 aaKnown RBP14.18□□□□□ -0.14
AFF3-215ENST00000498090 CFAP100Q494V2 611 aa14.18□□□□□ -0.14
AFF3-215ENST00000498090 C9orf131Q5VYM1 1079 aa14.18□□□□□ -0.14
AFF3-215ENST00000498090 ARMCX5Q6P1M9 558 aa14.18□□□□□ -0.14
AFF3-215ENST00000498090 METTL16Q86W50 562 aaKnown RBP14.18□□□□□ -0.14
AFF3-215ENST00000498090 ZNF592Q92610 1267 aa14.18□□□□□ -0.14
AFF3-215ENST00000498090 CRNKL1Q9BZJ0 848 aaKnown RBP14.18□□□□□ -0.14
AFF3-215ENST00000498090 SRPRBQ9Y5M8 271 aaKnown RBP14.18□□□□□ -0.14
AFF3-215ENST00000498090 DDX60LQ5H9U9 1706 aaKnown RBP14.18□□□□□ -0.14
AFF3-215ENST00000498090 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.17□□□□□ -0.14
AFF3-215ENST00000498090 USP27XA6NNY8 438 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 SMIM22K7EJ46 135 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 SLU7O95391 586 aaKnown RBP14.17□□□□□ -0.14
AFF3-215ENST00000498090 LMOD1P29536 600 aaPredicted RBP14.17□□□□□ -0.14
AFF3-215ENST00000498090 GMPSP49915 693 aaPredicted RBP14.17□□□□□ -0.14
AFF3-215ENST00000498090 MDM2Q00987 491 aaPredicted RBP14.17□□□□□ -0.14
AFF3-215ENST00000498090 EVX2Q03828 476 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 LONRF3Q496Y0 759 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 E4F1Q66K89 784 aaPredicted RBP14.17□□□□□ -0.14
AFF3-215ENST00000498090 TEX11Q8IYF3 940 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 ZNF654Q8IZM8 581 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 ZNF784Q8NCA9 323 aaPredicted RBP14.17□□□□□ -0.14
AFF3-215ENST00000498090 DCP1AQ9NPI6 582 aaPredicted RBP14.17□□□□□ -0.14
AFF3-215ENST00000498090 MKRN1Q9UHC7 482 aaKnown RBP14.17□□□□□ -0.14
AFF3-215ENST00000498090 FBXO2Q9UK22 296 aaPredicted RBP14.17□□□□□ -0.14
AFF3-215ENST00000498090 PCDHA5Q9Y5H7 936 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 GJA3Q9Y6H8 435 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 GOLGA6L9A6NEM1 432 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 BTBD18B2RXH4 712 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 USP17L8P0C7I0 530 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 SARSP49591 514 aaKnown RBP14.17□□□□□ -0.14
AFF3-215ENST00000498090 PNOCQ13519 176 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 POSTNQ15063 836 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 CDC42EP5Q6NZY7 148 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 VSTM4Q8IW00 320 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 STK11IPQ8N1F8 1099 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 NKX2-3Q8TAU0 364 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 ENOX1Q8TC92 643 aaKnown RBP14.17□□□□□ -0.14
AFF3-215ENST00000498090 TGFBRAP1Q8WUH2 860 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 PPP1R13BQ96KQ4 1090 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 MYL10Q9BUA6 226 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 HSD3B7Q9H2F3 369 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 TMX1Q9H3N1 280 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 L2HGDHQ9H9P8 463 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 TOMM22Q9NS69 142 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 OGFRQ9NZT2 677 aa14.17□□□□□ -0.14
AFF3-215ENST00000498090 PHLPP2Q6ZVD8 1323 aa14.16□□□□□ -0.14
AFF3-215ENST00000498090 CYP2D7A0A087X1C5 515 aa14.16□□□□□ -0.14
AFF3-215ENST00000498090 ZSCAN12O43309 604 aa14.16□□□□□ -0.14
AFF3-215ENST00000498090 TOP1P11387 765 aaKnown RBP14.16□□□□□ -0.14
AFF3-215ENST00000498090 PLCG2P16885 1265 aa14.16□□□□□ -0.14
AFF3-215ENST00000498090 RPS12P25398 132 aaKnown RBP14.16□□□□□ -0.14
AFF3-215ENST00000498090 ERCC5P28715 1186 aaPredicted RBP14.16□□□□□ -0.14
AFF3-215ENST00000498090 RRP12Q5JTH9 1297 aaKnown RBP14.16□□□□□ -0.14
AFF3-215ENST00000498090 CERS3Q8IU89 383 aa14.16□□□□□ -0.14
AFF3-215ENST00000498090 MAPKAPK5Q8IW41 473 aa14.16□□□□□ -0.14
AFF3-215ENST00000498090 SMARCE1Q969G3 411 aa14.16□□□□□ -0.14
AFF3-215ENST00000498090 CLIC6Q96NY7 704 aa14.16□□□□□ -0.14
AFF3-215ENST00000498090 PYM1Q9BRP8 204 aaKnown RBP14.16□□□□□ -0.14
AFF3-215ENST00000498090 SRRTQ9BXP5 876 aaKnown RBP14.16□□□□□ -0.14
AFF3-215ENST00000498090 BRMS1Q9HCU9 246 aa14.16□□□□□ -0.14
AFF3-215ENST00000498090 DDX4Q9NQI0 724 aaKnown RBP14.16□□□□□ -0.14
AFF3-215ENST00000498090 ATP8A2Q9NTI2 1148 aa14.16□□□□□ -0.14
AFF3-215ENST00000498090 USP40Q9NVE5 1235 aa14.16□□□□□ -0.14
AFF3-215ENST00000498090 TACC3Q9Y6A5 838 aa14.16□□□□□ -0.14
AFF3-215ENST00000498090 CDK5RAP2Q96SN8 1893 aa14.16□□□□□ -0.14
AFF3-215ENST00000498090 NAV1Q8NEY1 1877 aa14.15□□□□□ -0.14
AFF3-215ENST00000498090 FLT1P17948 1338 aa14.15□□□□□ -0.14
AFF3-215ENST00000498090 SPDYE2BA6NHP3 402 aa14.15□□□□□ -0.14
AFF3-215ENST00000498090 PRPF3O43395 683 aaKnown RBP14.15□□□□□ -0.14
AFF3-215ENST00000498090 FGRP09769 529 aa14.15□□□□□ -0.14
AFF3-215ENST00000498090 SPDYE6P0CI01 402 aa14.15□□□□□ -0.14
AFF3-215ENST00000498090 CYP2D6P10635 497 aa14.15□□□□□ -0.14
AFF3-215ENST00000498090 USP5P45974 858 aa14.15□□□□□ -0.14
AFF3-215ENST00000498090 TOB1P50616 345 aaPredicted RBP14.15□□□□□ -0.14
AFF3-215ENST00000498090 RBM5P52756 815 aaKnown RBP eCLIP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms