RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 FASTKD5Q7L8L6 764 aaKnown RBP23.49■■□□□ 1.35
CTSD-206ENST00000497544 PRRT2Q7Z6L0 340 aaPredicted RBP23.49■■□□□ 1.35
CTSD-206ENST00000497544 TMTC2Q8N394 836 aa23.49■■□□□ 1.35
CTSD-206ENST00000497544 IGDCC4Q8TDY8 1250 aa23.49■■□□□ 1.35
CTSD-206ENST00000497544 TMEM47Q9BQJ4 181 aa23.49■■□□□ 1.35
CTSD-206ENST00000497544 PRO3102Q9H379 93 aa23.49■■□□□ 1.35
CTSD-206ENST00000497544 KAT14Q9H8E8 782 aa23.49■■□□□ 1.35
CTSD-206ENST00000497544 SYNPO2Q9UMS6 1093 aa23.49■■□□□ 1.35
CTSD-206ENST00000497544 LAMA3Q16787 3333 aa23.48■■□□□ 1.35
CTSD-206ENST00000497544 COL9A3Q14050 684 aaPredicted RBP23.48■■□□□ 1.35
CTSD-206ENST00000497544 SEC23AQ15436 765 aa23.48■■□□□ 1.35
CTSD-206ENST00000497544 LRRC47Q8N1G4 583 aaKnown RBP23.48■■□□□ 1.35
CTSD-206ENST00000497544 IL17RAQ96F46 866 aa23.48■■□□□ 1.35
CTSD-206ENST00000497544 TCEANC2Q96MN5 208 aa23.48■■□□□ 1.35
CTSD-206ENST00000497544 LRRC2Q9BYS8 371 aa23.48■■□□□ 1.35
CTSD-206ENST00000497544 VCPKMTQ9H867 229 aa23.48■■□□□ 1.35
CTSD-206ENST00000497544 EFCC1Q9HA90 598 aa23.48■■□□□ 1.35
CTSD-206ENST00000497544 EMILIN3Q9NT22 766 aa23.48■■□□□ 1.35
CTSD-206ENST00000497544 IFNL1Q8IU54 200 aa23.47■■□□□ 1.35
CTSD-206ENST00000497544 TBC1D32Q96NH3 1257 aa23.47■■□□□ 1.35
CTSD-206ENST00000497544 UPF3BQ9BZI7 483 aaKnown RBP23.47■■□□□ 1.35
CTSD-206ENST00000497544 PTPRFP10586 1907 aa23.47■■□□□ 1.35
CTSD-206ENST00000497544 F5H6K3 240 aa23.46■■□□□ 1.35
CTSD-206ENST00000497544 KLRC3Q07444 240 aa23.46■■□□□ 1.35
CTSD-206ENST00000497544 NFXL1Q6ZNB6 911 aa23.46■■□□□ 1.35
CTSD-206ENST00000497544 PROCA1Q8NCQ7 364 aaPredicted RBP23.46■■□□□ 1.35
CTSD-206ENST00000497544 PDRG1Q9NUG6 133 aa23.46■■□□□ 1.35
CTSD-206ENST00000497544 MTMR7Q9Y216 660 aa23.46■■□□□ 1.35
CTSD-206ENST00000497544 TESPA1A2RU30 521 aaPredicted RBP23.45■■□□□ 1.34
CTSD-206ENST00000497544 SH2B2O14492 632 aaPredicted RBP23.45■■□□□ 1.34
CTSD-206ENST00000497544 LIFRP42702 1097 aa23.45■■□□□ 1.34
CTSD-206ENST00000497544 SLFN13Q68D06 897 aa23.45■■□□□ 1.34
CTSD-206ENST00000497544 Q6ZUG5 572 aa23.45■■□□□ 1.34
CTSD-206ENST00000497544 SPICE1Q8N0Z3 855 aa23.45■■□□□ 1.34
CTSD-206ENST00000497544 BRI3BPQ8WY22 251 aa23.45■■□□□ 1.34
CTSD-206ENST00000497544 LPAR1Q92633 364 aa23.45■■□□□ 1.34
CTSD-206ENST00000497544 C12orf42Q96LP6 360 aa23.45■■□□□ 1.34
CTSD-206ENST00000497544 GPHNQ9NQX3 736 aaPredicted RBP23.45■■□□□ 1.34
CTSD-206ENST00000497544 CCDC69A6NI79 296 aa23.44■■□□□ 1.34
CTSD-206ENST00000497544 IGF2BP3O00425 579 aaKnown RBP eCLIP23.44■■□□□ 1.34
CTSD-206ENST00000497544 SOX1O00570 391 aaPredicted RBP23.44■■□□□ 1.34
CTSD-206ENST00000497544 OTUD7BQ6GQQ9 843 aa23.44■■□□□ 1.34
CTSD-206ENST00000497544 PNMA1Q8ND90 353 aa23.44■■□□□ 1.34
CTSD-206ENST00000497544 GMCL1P1Q8NEA9 526 aa23.44■■□□□ 1.34
CTSD-206ENST00000497544 LY9Q9HBG7 655 aa23.44■■□□□ 1.34
CTSD-206ENST00000497544 NDUFB10O96000 172 aa23.43■■□□□ 1.34
CTSD-206ENST00000497544 NEK4P51957 841 aa23.43■■□□□ 1.34
CTSD-206ENST00000497544 MOGSQ13724 837 aa23.43■■□□□ 1.34
CTSD-206ENST00000497544 SENP2Q9HC62 589 aa23.43■■□□□ 1.34
CTSD-206ENST00000497544 ISY1Q9ULR0 285 aaKnown RBP23.43■■□□□ 1.34
CTSD-206ENST00000497544 AGTPBP1Q9UPW5 1226 aa23.43■■□□□ 1.34
CTSD-206ENST00000497544 BTBD19C9JJ37 291 aa23.42■■□□□ 1.34
CTSD-206ENST00000497544 PABPC4Q13310 644 aaKnown RBP eCLIP23.42■■□□□ 1.34
CTSD-206ENST00000497544 KIAA1755Q5JYT7 1200 aa23.42■■□□□ 1.34
CTSD-206ENST00000497544 SYNE3Q6ZMZ3 975 aa23.42■■□□□ 1.34
CTSD-206ENST00000497544 CATIPQ7Z7H3 387 aa23.42■■□□□ 1.34
CTSD-206ENST00000497544 CHMP4CQ96CF2 233 aa23.42■■□□□ 1.34
CTSD-206ENST00000497544 KIF2CQ99661 725 aa23.42■■□□□ 1.34
CTSD-206ENST00000497544 COL25A1Q9BXS0 654 aaPredicted RBP23.42■■□□□ 1.34
CTSD-206ENST00000497544 WDR46O15213 610 aaKnown RBP23.41■■□□□ 1.34
CTSD-206ENST00000497544 VCAM1P19320 739 aa23.41■■□□□ 1.34
CTSD-206ENST00000497544 SLC1A4P43007 532 aa23.41■■□□□ 1.34
CTSD-206ENST00000497544 GPAT2Q6NUI2 795 aa23.41■■□□□ 1.34
CTSD-206ENST00000497544 ANKRD23Q86SG2 305 aa23.41■■□□□ 1.34
CTSD-206ENST00000497544 LRCH3Q96II8 777 aa23.41■■□□□ 1.34
CTSD-206ENST00000497544 PTPN18Q99952 460 aa23.41■■□□□ 1.34
CTSD-206ENST00000497544 RPAP3Q9H6T3 665 aaPredicted RBP23.41■■□□□ 1.34
CTSD-206ENST00000497544 SLC12A7Q9Y666 1083 aa23.41■■□□□ 1.34
CTSD-206ENST00000497544 USP17L15C9J2P7 530 aa23.4■■□□□ 1.34
CTSD-206ENST00000497544 USP17L13C9JLJ4 530 aa23.4■■□□□ 1.34
CTSD-206ENST00000497544 USP17L11C9JVI0 530 aa23.4■■□□□ 1.34
CTSD-206ENST00000497544 USP17L18D6R9N7 530 aa23.4■■□□□ 1.34
CTSD-206ENST00000497544 USP17L22D6RA61 530 aa23.4■■□□□ 1.34
CTSD-206ENST00000497544 USP17L17D6RBQ6 530 aa23.4■■□□□ 1.34
CTSD-206ENST00000497544 USP17L19D6RCP7 530 aa23.4■■□□□ 1.34
CTSD-206ENST00000497544 USP17L20D6RJB6 530 aa23.4■■□□□ 1.34
CTSD-206ENST00000497544 USP17L24Q0WX57 530 aa23.4■■□□□ 1.34
CTSD-206ENST00000497544 CRHR2Q13324 411 aa23.4■■□□□ 1.34
CTSD-206ENST00000497544 SLC9C1Q4G0N8 1177 aa23.4■■□□□ 1.34
CTSD-206ENST00000497544 FAM83BQ5T0W9 1011 aa23.4■■□□□ 1.34
CTSD-206ENST00000497544 TREML2Q5T2D2 321 aa23.4■■□□□ 1.34
CTSD-206ENST00000497544 FBXL16Q8N461 479 aa23.4■■□□□ 1.34
CTSD-206ENST00000497544 DCAF4Q8WV16 495 aa23.4■■□□□ 1.34
CTSD-206ENST00000497544 BRF1Q92994 677 aa23.4■■□□□ 1.34
CTSD-206ENST00000497544 GMCL1Q96IK5 515 aa23.4■■□□□ 1.34
CTSD-206ENST00000497544 NAP1L2Q9ULW6 460 aaPredicted RBP23.4■■□□□ 1.34
CTSD-206ENST00000497544 PTCH2Q9Y6C5 1203 aa23.4■■□□□ 1.34
CTSD-206ENST00000497544 PDHXO00330 501 aa23.39■■□□□ 1.33
CTSD-206ENST00000497544 MYCP01106 439 aaPredicted RBP23.39■■□□□ 1.33
CTSD-206ENST00000497544 BMP3P12645 472 aa23.39■■□□□ 1.33
CTSD-206ENST00000497544 OSBPP22059 807 aa23.39■■□□□ 1.33
CTSD-206ENST00000497544 HOXA7P31268 230 aaPredicted RBP23.39■■□□□ 1.33
CTSD-206ENST00000497544 RABEP1Q15276 862 aa23.39■■□□□ 1.33
CTSD-206ENST00000497544 CCDC96Q2M329 555 aa23.39■■□□□ 1.33
CTSD-206ENST00000497544 SGMS1Q86VZ5 419 aa23.39■■□□□ 1.33
CTSD-206ENST00000497544 ZNF654Q8IZM8 581 aa23.39■■□□□ 1.33
CTSD-206ENST00000497544 FAM43AQ8N2R8 423 aa23.39■■□□□ 1.33
CTSD-206ENST00000497544 NUP133Q8WUM0 1156 aa23.39■■□□□ 1.33
CTSD-206ENST00000497544 DPF3Q92784 378 aa23.39■■□□□ 1.33
CTSD-206ENST00000497544 NUP88Q99567 741 aaPredicted RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms