RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 ABCB5Q2M3G0 1257 aa12.8□□□□□ -0.36
TOM1-217ENST00000497448 GORABQ5T7V8 394 aa12.8□□□□□ -0.36
TOM1-217ENST00000497448 TMEM199Q8N511 208 aa12.8□□□□□ -0.36
TOM1-217ENST00000497448 NUP133Q8WUM0 1156 aa12.8□□□□□ -0.36
TOM1-217ENST00000497448 HERVK_113Q902F9 699 aa12.8□□□□□ -0.36
TOM1-217ENST00000497448 TSEN34Q9BSV6 310 aaKnown RBP12.8□□□□□ -0.36
TOM1-217ENST00000497448 PPP1R12CQ9BZL4 782 aa12.8□□□□□ -0.36
TOM1-217ENST00000497448 TANGO6Q9C0B7 1094 aa12.8□□□□□ -0.36
TOM1-217ENST00000497448 EHD4Q9H223 541 aa12.8□□□□□ -0.36
TOM1-217ENST00000497448 MROH8Q9H579 483 aa12.8□□□□□ -0.36
TOM1-217ENST00000497448 MROH7Q68CQ1 1323 aa12.8□□□□□ -0.36
TOM1-217ENST00000497448 ZNF521Q96K83 1311 aa12.8□□□□□ -0.36
TOM1-217ENST00000497448 COL4A4P53420 1690 aaPredicted RBP12.8□□□□□ -0.36
TOM1-217ENST00000497448 PRRC2BQ5JSZ5 2229 aaKnown RBP12.79□□□□□ -0.36
TOM1-217ENST00000497448 MYADML2A6NDP7 307 aa12.79□□□□□ -0.36
TOM1-217ENST00000497448 MOXD2PA6NHM9 499 aa12.79□□□□□ -0.36
TOM1-217ENST00000497448 GPR37L1O60883 481 aa12.79□□□□□ -0.36
TOM1-217ENST00000497448 DYNLL1P63167 89 aaKnown RBP12.79□□□□□ -0.36
TOM1-217ENST00000497448 PLS1Q14651 629 aa12.79□□□□□ -0.36
TOM1-217ENST00000497448 CERKLQ49MI3 558 aaPredicted RBP12.79□□□□□ -0.36
TOM1-217ENST00000497448 PPP2R2DQ66LE6 453 aa12.79□□□□□ -0.36
TOM1-217ENST00000497448 CCSAPQ6IQ19 270 aaPredicted RBP12.79□□□□□ -0.36
TOM1-217ENST00000497448 MB21D1Q8N884 522 aa12.79□□□□□ -0.36
TOM1-217ENST00000497448 KLHDC9Q8NEP7 349 aa12.79□□□□□ -0.36
TOM1-217ENST00000497448 CDCA7LQ96GN5 454 aa12.79□□□□□ -0.36
TOM1-217ENST00000497448 TINF2Q9BSI4 451 aa12.79□□□□□ -0.36
TOM1-217ENST00000497448 SERPINB13Q9UIV8 391 aa12.79□□□□□ -0.36
TOM1-217ENST00000497448 MYH8P13535 1937 aa12.79□□□□□ -0.36
TOM1-217ENST00000497448 A0A1W2PRG0 241 aa12.78□□□□□ -0.36
TOM1-217ENST00000497448 PGK2P07205 417 aa12.78□□□□□ -0.36
TOM1-217ENST00000497448 UQCRFS1P1P0C7P4 283 aa12.78□□□□□ -0.36
TOM1-217ENST00000497448 FCER1AP12319 257 aa12.78□□□□□ -0.36
TOM1-217ENST00000497448 SHMT1P34896 483 aa12.78□□□□□ -0.36
TOM1-217ENST00000497448 ATG4CQ96DT6 458 aa12.78□□□□□ -0.36
TOM1-217ENST00000497448 MRS2Q9HD23 443 aa12.78□□□□□ -0.36
TOM1-217ENST00000497448 CABP5Q9NP86 173 aa12.78□□□□□ -0.36
TOM1-217ENST00000497448 IL23AQ9NPF7 189 aa12.78□□□□□ -0.36
TOM1-217ENST00000497448 SNRKQ9NRH2 765 aa12.78□□□□□ -0.36
TOM1-217ENST00000497448 HOXC10Q9NYD6 342 aa12.78□□□□□ -0.36
TOM1-217ENST00000497448 TLL1O43897 1013 aa12.77□□□□□ -0.37
TOM1-217ENST00000497448 MYOGP15173 224 aa12.77□□□□□ -0.37
TOM1-217ENST00000497448 DSG3P32926 999 aa12.77□□□□□ -0.37
TOM1-217ENST00000497448 CDK7P50613 346 aa12.77□□□□□ -0.37
TOM1-217ENST00000497448 RABGGTBP53611 331 aa12.77□□□□□ -0.37
TOM1-217ENST00000497448 IRX5P78411 483 aaPredicted RBP12.77□□□□□ -0.37
TOM1-217ENST00000497448 SEPT2Q15019 361 aa12.77□□□□□ -0.37
TOM1-217ENST00000497448 KCNA10Q16322 511 aa12.77□□□□□ -0.37
TOM1-217ENST00000497448 KIAA1755Q5JYT7 1200 aa12.77□□□□□ -0.37
TOM1-217ENST00000497448 FAM126BQ8IXS8 530 aa12.77□□□□□ -0.37
TOM1-217ENST00000497448 GLT1D1Q96MS3 346 aa12.77□□□□□ -0.37
TOM1-217ENST00000497448 MMP19Q99542 508 aa12.77□□□□□ -0.37
TOM1-217ENST00000497448 MEIS3Q99687 375 aa12.77□□□□□ -0.37
TOM1-217ENST00000497448 MTIF3Q9H2K0 278 aaKnown RBP12.77□□□□□ -0.37
TOM1-217ENST00000497448 ELP1O95163 1332 aa12.77□□□□□ -0.37
TOM1-217ENST00000497448 MCM3APO60318 1980 aa12.76□□□□□ -0.37
TOM1-217ENST00000497448 SRGAP3O43295 1099 aa12.76□□□□□ -0.37
TOM1-217ENST00000497448 FLOT1O75955 427 aa12.76□□□□□ -0.37
TOM1-217ENST00000497448 CYP2E1P05181 493 aaPredicted RBP12.76□□□□□ -0.37
TOM1-217ENST00000497448 CST5P28325 142 aaPredicted RBP12.76□□□□□ -0.37
TOM1-217ENST00000497448 CYP2C18P33260 490 aa12.76□□□□□ -0.37
TOM1-217ENST00000497448 MRE11P49959 708 aa12.76□□□□□ -0.37
TOM1-217ENST00000497448 ZNF792Q3KQV3 632 aa12.76□□□□□ -0.37
TOM1-217ENST00000497448 MTCH2Q9Y6C9 303 aa12.76□□□□□ -0.37
TOM1-217ENST00000497448 WDFY4Q6ZS81 3184 aa12.75□□□□□ -0.37
TOM1-217ENST00000497448 A0A0U1RQG5 324 aaPredicted RBP12.75□□□□□ -0.37
TOM1-217ENST00000497448 ARVCFO00192 962 aa12.75□□□□□ -0.37
TOM1-217ENST00000497448 FGBP02675 491 aa12.75□□□□□ -0.37
TOM1-217ENST00000497448 USP5P45974 858 aa12.75□□□□□ -0.37
TOM1-217ENST00000497448 TMEM132BQ14DG7 1078 aa12.75□□□□□ -0.37
TOM1-217ENST00000497448 UMODL1Q5DID0 1318 aa12.75□□□□□ -0.37
TOM1-217ENST00000497448 OTOP2Q7RTS6 562 aa12.75□□□□□ -0.37
TOM1-217ENST00000497448 MIGA1Q8NAN2 632 aa12.75□□□□□ -0.37
TOM1-217ENST00000497448 COG5Q9UP83 839 aa12.75□□□□□ -0.37
TOM1-217ENST00000497448 CNPY2Q9Y2B0 182 aa12.75□□□□□ -0.37
TOM1-217ENST00000497448 DIS3Q9Y2L1 958 aaKnown RBP12.75□□□□□ -0.37
TOM1-217ENST00000497448 PI4K2BG5E9Z4 385 aa12.74□□□□□ -0.37
TOM1-217ENST00000497448 RFXAPO00287 272 aa12.74□□□□□ -0.37
TOM1-217ENST00000497448 TLR3O15455 904 aaKnown RBP12.74□□□□□ -0.37
TOM1-217ENST00000497448 ADCY6O43306 1168 aa12.74□□□□□ -0.37
TOM1-217ENST00000497448 SLC25A27O95847 323 aa12.74□□□□□ -0.37
TOM1-217ENST00000497448 CD4P01730 458 aa12.74□□□□□ -0.37
TOM1-217ENST00000497448 ASGR1P07306 291 aa12.74□□□□□ -0.37
TOM1-217ENST00000497448 POU3F3P20264 500 aaPredicted RBP12.74□□□□□ -0.37
TOM1-217ENST00000497448 PLCD1P51178 756 aa12.74□□□□□ -0.37
TOM1-217ENST00000497448 MTX1Q13505 466 aa12.74□□□□□ -0.37
TOM1-217ENST00000497448 KCTD2Q14681 263 aa12.74□□□□□ -0.37
TOM1-217ENST00000497448 TTC39AQ5SRH9 613 aa12.74□□□□□ -0.37
TOM1-217ENST00000497448 KRT40Q6A162 431 aa12.74□□□□□ -0.37
TOM1-217ENST00000497448 SAMD1Q6SPF0 538 aaPredicted RBP12.74□□□□□ -0.37
TOM1-217ENST00000497448 TTC6Q86TZ1 520 aa12.74□□□□□ -0.37
TOM1-217ENST00000497448 PIH1D3Q9NQM4 214 aaKnown RBP12.74□□□□□ -0.37
TOM1-217ENST00000497448 ZHX1Q9UKY1 873 aaPredicted RBP12.74□□□□□ -0.37
TOM1-217ENST00000497448 HDAC5Q9UQL6 1122 aa12.74□□□□□ -0.37
TOM1-217ENST00000497448 PCDHA11Q9Y5I1 949 aa12.74□□□□□ -0.37
TOM1-217ENST00000497448 EPOPA6NHQ4 379 aa12.73□□□□□ -0.37
TOM1-217ENST00000497448 SMIM22K7EJ46 135 aa12.73□□□□□ -0.37
TOM1-217ENST00000497448 MPHOSPH10O00566 681 aaKnown RBP12.73□□□□□ -0.37
TOM1-217ENST00000497448 GTPBP6O43824 516 aaPredicted RBP12.73□□□□□ -0.37
TOM1-217ENST00000497448 DUSP11O75319 330 aaKnown RBP12.73□□□□□ -0.37
TOM1-217ENST00000497448 C6orf222P0C671 652 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms