RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 CCDC196A0A1B0GTZ2 297 aa21.28■■□□□ 1
RGP1-202ENST00000496906 CXCL11O14625 94 aa21.28■■□□□ 1
RGP1-202ENST00000496906 HMGCS2P54868 508 aa21.28■■□□□ 1
RGP1-202ENST00000496906 ASPRV1Q53RT3 343 aa21.28■■□□□ 1
RGP1-202ENST00000496906 SH3D19Q5HYK7 790 aa21.28■■□□□ 1
RGP1-202ENST00000496906 C12orf42Q96LP6 360 aa21.28■■□□□ 1
RGP1-202ENST00000496906 FRMPD2Q68DX3 1309 aaPredicted RBP21.28■■□□□ 1
RGP1-202ENST00000496906 DHX16O60231 1041 aaKnown RBP21.27■■□□□ 1
RGP1-202ENST00000496906 GOLGA8HP0CJ92 632 aa21.27■■□□□ 1
RGP1-202ENST00000496906 NTRK3Q16288 839 aa21.27■■□□□ 1
RGP1-202ENST00000496906 CCDC96Q2M329 555 aa21.27■■□□□ 1
RGP1-202ENST00000496906 GPATCH4Q5T3I0 446 aaKnown RBP21.27■■□□□ 1
RGP1-202ENST00000496906 TMTC3Q6ZXV5 915 aa21.27■■□□□ 1
RGP1-202ENST00000496906 WNK4Q96J92 1243 aa21.27■■□□□ 1
RGP1-202ENST00000496906 NUP88Q99567 741 aaPredicted RBP21.27■■□□□ 1
RGP1-202ENST00000496906 A0A0G2JLL6 359 aaPredicted RBP21.27■□□□□ 0.99
RGP1-202ENST00000496906 PLEKHA8P1O95397 391 aa21.27■□□□□ 0.99
RGP1-202ENST00000496906 BMP3P12645 472 aa21.27■□□□□ 0.99
RGP1-202ENST00000496906 KCTD1Q719H9 257 aa21.27■□□□□ 0.99
RGP1-202ENST00000496906 PRRT2Q7Z6L0 340 aaPredicted RBP21.27■□□□□ 0.99
RGP1-202ENST00000496906 PTPRFP10586 1907 aa21.26■□□□□ 0.99
RGP1-202ENST00000496906 CPLX1O14810 134 aa21.26■□□□□ 0.99
RGP1-202ENST00000496906 WDR46O15213 610 aaKnown RBP21.26■□□□□ 0.99
RGP1-202ENST00000496906 CTDNEP1O95476 244 aa21.26■□□□□ 0.99
RGP1-202ENST00000496906 VCAM1P19320 739 aa21.26■□□□□ 0.99
RGP1-202ENST00000496906 SLC4A3P48751 1232 aa21.26■□□□□ 0.99
RGP1-202ENST00000496906 GNAQP50148 359 aa21.26■□□□□ 0.99
RGP1-202ENST00000496906 FAM83BQ5T0W9 1011 aa21.26■□□□□ 0.99
RGP1-202ENST00000496906 NSUN7Q8NE18 718 aaKnown RBP21.26■□□□□ 0.99
RGP1-202ENST00000496906 INTS4Q96HW7 963 aaKnown RBP21.26■□□□□ 0.99
RGP1-202ENST00000496906 ABT1Q9ULW3 272 aaKnown RBP21.26■□□□□ 0.99
RGP1-202ENST00000496906 KLRF2D3W0D1 207 aa21.25■□□□□ 0.99
RGP1-202ENST00000496906 ZBTB48P10074 688 aaPredicted RBP21.25■□□□□ 0.99
RGP1-202ENST00000496906 IFNAR1P17181 557 aa21.25■□□□□ 0.99
RGP1-202ENST00000496906 FUT2Q10981 343 aa21.25■□□□□ 0.99
RGP1-202ENST00000496906 SPRYD7Q5W111 196 aa21.25■□□□□ 0.99
RGP1-202ENST00000496906 RGMBQ6NW40 437 aa21.25■□□□□ 0.99
RGP1-202ENST00000496906 CMTR1Q8N1G2 835 aaKnown RBP21.25■□□□□ 0.99
RGP1-202ENST00000496906 SRBD1Q8N5C6 995 aaKnown RBP21.25■□□□□ 0.99
RGP1-202ENST00000496906 LLPHQ9BRT6 129 aaKnown RBP21.25■□□□□ 0.99
RGP1-202ENST00000496906 GPCPD1Q9NPB8 672 aa21.25■□□□□ 0.99
RGP1-202ENST00000496906 TMOD4Q9NZQ9 345 aa21.25■□□□□ 0.99
RGP1-202ENST00000496906 C1QTNF8P60827 252 aa21.24■□□□□ 0.99
RGP1-202ENST00000496906 SLC35G1Q2M3R5 365 aa21.24■□□□□ 0.99
RGP1-202ENST00000496906 TTBK2Q6IQ55 1244 aa21.24■□□□□ 0.99
RGP1-202ENST00000496906 CPLX2Q6PUV4 134 aaKnown RBP21.24■□□□□ 0.99
RGP1-202ENST00000496906 NBPF11Q86T75 865 aa21.24■□□□□ 0.99
RGP1-202ENST00000496906 RASAL3Q86YV0 1011 aa21.24■□□□□ 0.99
RGP1-202ENST00000496906 IPO9Q96P70 1041 aaKnown RBP21.24■□□□□ 0.99
RGP1-202ENST00000496906 LZTS2Q9BRK4 669 aa21.24■□□□□ 0.99
RGP1-202ENST00000496906 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.24■□□□□ 0.99
RGP1-202ENST00000496906 CNTNAP5Q8WYK1 1306 aa21.23■□□□□ 0.99
RGP1-202ENST00000496906 CDKL5O76039 1030 aa21.23■□□□□ 0.99
RGP1-202ENST00000496906 APLP1P51693 650 aa21.23■□□□□ 0.99
RGP1-202ENST00000496906 ZNF157P51786 506 aaPredicted RBP21.23■□□□□ 0.99
RGP1-202ENST00000496906 SNAPC2Q13487 334 aa21.23■□□□□ 0.99
RGP1-202ENST00000496906 HHIPL1Q96JK4 782 aa21.23■□□□□ 0.99
RGP1-202ENST00000496906 CPVLQ9H3G5 476 aa21.23■□□□□ 0.99
RGP1-202ENST00000496906 ISY1Q9ULR0 285 aaKnown RBP21.23■□□□□ 0.99
RGP1-202ENST00000496906 LOC285556D6RIA3 1793 aa21.23■□□□□ 0.99
RGP1-202ENST00000496906 PTPDC1A2A3K4 754 aa21.23■□□□□ 0.99
RGP1-202ENST00000496906 TMEM232C9JQI7 657 aa21.23■□□□□ 0.99
RGP1-202ENST00000496906 CYTH3O43739 400 aa21.23■□□□□ 0.99
RGP1-202ENST00000496906 JAK2O60674 1132 aa21.23■□□□□ 0.99
RGP1-202ENST00000496906 DTNBO60941 627 aa21.23■□□□□ 0.99
RGP1-202ENST00000496906 HSP90AA1P07900 732 aaKnown RBP21.23■□□□□ 0.99
RGP1-202ENST00000496906 SMARCA1P28370 1054 aa21.23■□□□□ 0.99
RGP1-202ENST00000496906 MOGSQ13724 837 aa21.23■□□□□ 0.99
RGP1-202ENST00000496906 CCDC82Q8N4S0 544 aa21.23■□□□□ 0.99
RGP1-202ENST00000496906 PROCA1Q8NCQ7 364 aaPredicted RBP21.23■□□□□ 0.99
RGP1-202ENST00000496906 SMARCC2Q8TAQ2 1214 aa21.23■□□□□ 0.99
RGP1-202ENST00000496906 SPZ1Q9BXG8 430 aa21.23■□□□□ 0.99
RGP1-202ENST00000496906 UBA5Q9GZZ9 404 aa21.23■□□□□ 0.99
RGP1-202ENST00000496906 PPFIA3O75145 1194 aa21.22■□□□□ 0.99
RGP1-202ENST00000496906 STAT2P52630 851 aa21.22■□□□□ 0.99
RGP1-202ENST00000496906 MKRN3Q13064 507 aaKnown RBP21.22■□□□□ 0.99
RGP1-202ENST00000496906 BTNL9Q6UXG8 535 aa21.22■□□□□ 0.99
RGP1-202ENST00000496906 PHKBQ93100 1093 aa21.22■□□□□ 0.99
RGP1-202ENST00000496906 MS4A4AQ96JQ5 239 aa21.22■□□□□ 0.99
RGP1-202ENST00000496906 RPAP3Q9H6T3 665 aaPredicted RBP21.22■□□□□ 0.99
RGP1-202ENST00000496906 CREBZFQ9NS37 354 aa21.22■□□□□ 0.99
RGP1-202ENST00000496906 FOXD4L1Q9NU39 408 aa21.22■□□□□ 0.99
RGP1-202ENST00000496906 PLA2G6O60733 806 aa21.21■□□□□ 0.99
RGP1-202ENST00000496906 SLC10A3P09131 477 aa21.21■□□□□ 0.99
RGP1-202ENST00000496906 SLC16A2P36021 539 aa21.21■□□□□ 0.99
RGP1-202ENST00000496906 GTF2A2P52657 109 aa21.21■□□□□ 0.99
RGP1-202ENST00000496906 GADL1Q6ZQY3 521 aa21.21■□□□□ 0.99
RGP1-202ENST00000496906 SPRYD3Q8NCJ5 442 aa21.21■□□□□ 0.99
RGP1-202ENST00000496906 RIOX1Q9H6W3 641 aa21.21■□□□□ 0.99
RGP1-202ENST00000496906 FEM1BQ9UK73 627 aa21.21■□□□□ 0.99
RGP1-202ENST00000496906 FMNL1O95466 1100 aaPredicted RBP21.2■□□□□ 0.98
RGP1-202ENST00000496906 TREML2Q5T2D2 321 aa21.2■□□□□ 0.98
RGP1-202ENST00000496906 FASTKD5Q7L8L6 764 aaKnown RBP21.2■□□□□ 0.98
RGP1-202ENST00000496906 RNF26Q9BY78 433 aaPredicted RBP21.2■□□□□ 0.98
RGP1-202ENST00000496906 TANGO6Q9C0B7 1094 aa21.2■□□□□ 0.98
RGP1-202ENST00000496906 DAXXQ9UER7 740 aaPredicted RBP21.2■□□□□ 0.98
RGP1-202ENST00000496906 SMC3Q9UQE7 1217 aa21.2■□□□□ 0.98
RGP1-202ENST00000496906 STK36Q9NRP7 1315 aa21.2■□□□□ 0.98
RGP1-202ENST00000496906 CETPP11597 493 aa21.19■□□□□ 0.98
RGP1-202ENST00000496906 HMGN5P82970 282 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms