RNA–Protein interactions for RNA: ENST00000496744.5

ECM1-206, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-206ENST00000496744 FAM83BQ5T0W9 1011 aa12.98□□□□□ -0.33
ECM1-206ENST00000496744 CCAR1Q8IX12 1150 aaKnown RBP12.98□□□□□ -0.33
ECM1-206ENST00000496744 MB21D1Q8N884 522 aa12.98□□□□□ -0.33
ECM1-206ENST00000496744 NKX2-3Q8TAU0 364 aa12.98□□□□□ -0.33
ECM1-206ENST00000496744 DEFB118Q96PH6 123 aa12.98□□□□□ -0.33
ECM1-206ENST00000496744 NUP88Q99567 741 aaPredicted RBP12.98□□□□□ -0.33
ECM1-206ENST00000496744 SPATC1LQ9H0A9 340 aa12.98□□□□□ -0.33
ECM1-206ENST00000496744 CRISPLD2Q9H0B8 497 aa12.98□□□□□ -0.33
ECM1-206ENST00000496744 GOPCQ9HD26 462 aa12.98□□□□□ -0.33
ECM1-206ENST00000496744 IL17RBQ9NRM6 502 aa12.98□□□□□ -0.33
ECM1-206ENST00000496744 A0A0G2JMZ2 1700 aa12.97□□□□□ -0.33
ECM1-206ENST00000496744 SLC15A5A6NIM6 579 aa12.97□□□□□ -0.33
ECM1-206ENST00000496744 HOXC6P09630 235 aa12.97□□□□□ -0.33
ECM1-206ENST00000496744 ERCC3P19447 782 aa12.97□□□□□ -0.33
ECM1-206ENST00000496744 RGS2P41220 211 aa12.97□□□□□ -0.33
ECM1-206ENST00000496744 TMEM132BQ14DG7 1078 aa12.97□□□□□ -0.33
ECM1-206ENST00000496744 SHCBP1Q8NEM2 672 aa12.97□□□□□ -0.33
ECM1-206ENST00000496744 REPS2Q8NFH8 660 aa12.97□□□□□ -0.33
ECM1-206ENST00000496744 FLRT1Q9NZU1 646 aa12.97□□□□□ -0.33
ECM1-206ENST00000496744 PPP1R9AQ9ULJ8 1098 aa12.97□□□□□ -0.33
ECM1-206ENST00000496744 SYNPO2Q9UMS6 1093 aa12.97□□□□□ -0.33
ECM1-206ENST00000496744 PARP14Q460N5 1801 aa12.97□□□□□ -0.33
ECM1-206ENST00000496744 CCDC171Q6TFL3 1326 aa12.96□□□□□ -0.33
ECM1-206ENST00000496744 RPTORQ8N122 1335 aa12.96□□□□□ -0.33
ECM1-206ENST00000496744 VWA5AO00534 786 aa12.96□□□□□ -0.33
ECM1-206ENST00000496744 ORC4O43929 436 aa12.96□□□□□ -0.33
ECM1-206ENST00000496744 TTLL1O95922 423 aa12.96□□□□□ -0.33
ECM1-206ENST00000496744 SLC3A2P08195 630 aaKnown RBP12.96□□□□□ -0.33
ECM1-206ENST00000496744 TSPY3P0CV98 308 aa12.96□□□□□ -0.33
ECM1-206ENST00000496744 TSPY8P0CW00 308 aa12.96□□□□□ -0.33
ECM1-206ENST00000496744 NOVP48745 357 aa12.96□□□□□ -0.33
ECM1-206ENST00000496744 CACNB2Q08289 660 aaPredicted RBP12.96□□□□□ -0.33
ECM1-206ENST00000496744 PRPF38BQ5VTL8 546 aaKnown RBP12.96□□□□□ -0.33
ECM1-206ENST00000496744 GMCL1P1Q8NEA9 526 aa12.96□□□□□ -0.33
ECM1-206ENST00000496744 NPLOC4Q8TAT6 608 aa12.96□□□□□ -0.33
ECM1-206ENST00000496744 APBA2Q99767 749 aa12.96□□□□□ -0.33
ECM1-206ENST00000496744 NBPF3Q9H094 633 aa12.96□□□□□ -0.33
ECM1-206ENST00000496744 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.96□□□□□ -0.33
ECM1-206ENST00000496744 ZNF214Q9UL59 606 aaPredicted RBP12.96□□□□□ -0.33
ECM1-206ENST00000496744 ZMYM6O95789 1325 aa12.95□□□□□ -0.34
ECM1-206ENST00000496744 STRNO43815 780 aa12.95□□□□□ -0.34
ECM1-206ENST00000496744 RAD21O60216 631 aa12.95□□□□□ -0.34
ECM1-206ENST00000496744 NMT2O60551 498 aa12.95□□□□□ -0.34
ECM1-206ENST00000496744 PRKAR2AP13861 404 aaKnown RBP12.95□□□□□ -0.34
ECM1-206ENST00000496744 GSPT1P15170 499 aaKnown RBP12.95□□□□□ -0.34
ECM1-206ENST00000496744 WDR78Q5VTH9 848 aa12.95□□□□□ -0.34
ECM1-206ENST00000496744 SAMD1Q6SPF0 538 aaPredicted RBP12.95□□□□□ -0.34
ECM1-206ENST00000496744 CWC27Q6UX04 472 aaKnown RBP12.95□□□□□ -0.34
ECM1-206ENST00000496744 TRMT44Q8IYL2 757 aaKnown RBP12.95□□□□□ -0.34
ECM1-206ENST00000496744 LRRC47Q8N1G4 583 aaKnown RBP12.95□□□□□ -0.34
ECM1-206ENST00000496744 MROH8Q9H579 483 aa12.95□□□□□ -0.34
ECM1-206ENST00000496744 HMX1Q9NP08 348 aaPredicted RBP12.95□□□□□ -0.34
ECM1-206ENST00000496744 COBLO75128 1261 aa12.94□□□□□ -0.34
ECM1-206ENST00000496744 TFRCP02786 760 aaKnown RBP12.94□□□□□ -0.34
ECM1-206ENST00000496744 ZKSCAN1P17029 563 aaPredicted RBP12.94□□□□□ -0.34
ECM1-206ENST00000496744 ADORA2AP29274 412 aa12.94□□□□□ -0.34
ECM1-206ENST00000496744 MNX1P50219 401 aaPredicted RBP12.94□□□□□ -0.34
ECM1-206ENST00000496744 PLS1Q14651 629 aa12.94□□□□□ -0.34
ECM1-206ENST00000496744 TTC22Q5TAA0 569 aa12.94□□□□□ -0.34
ECM1-206ENST00000496744 RIOX2Q8IUF8 465 aa12.94□□□□□ -0.34
ECM1-206ENST00000496744 SLF1Q9BQI6 1058 aa12.94□□□□□ -0.34
ECM1-206ENST00000496744 IL25Q9H293 177 aa12.94□□□□□ -0.34
ECM1-206ENST00000496744 IVNS1ABPQ9Y6Y0 642 aa12.94□□□□□ -0.34
ECM1-206ENST00000496744 TSPY2A6NKD2 308 aa12.93□□□□□ -0.34
ECM1-206ENST00000496744 RANBP6O60518 1105 aaKnown RBP12.93□□□□□ -0.34
ECM1-206ENST00000496744 CAPN2P17655 700 aa12.93□□□□□ -0.34
ECM1-206ENST00000496744 CCND3P30281 292 aaPredicted RBP12.93□□□□□ -0.34
ECM1-206ENST00000496744 STAT3P40763 770 aa12.93□□□□□ -0.34
ECM1-206ENST00000496744 HAND2P61296 217 aa12.93□□□□□ -0.34
ECM1-206ENST00000496744 SLFN13Q68D06 897 aa12.93□□□□□ -0.34
ECM1-206ENST00000496744 LHX8Q68G74 356 aa12.93□□□□□ -0.34
ECM1-206ENST00000496744 NCAPG2Q86XI2 1143 aa12.93□□□□□ -0.34
ECM1-206ENST00000496744 ABRAQ8N0Z2 381 aa12.93□□□□□ -0.34
ECM1-206ENST00000496744 PRPF38AQ8NAV1 312 aaKnown RBP12.93□□□□□ -0.34
ECM1-206ENST00000496744 CWC22Q9HCG8 908 aaKnown RBP12.93□□□□□ -0.34
ECM1-206ENST00000496744 RIPK3Q9Y572 518 aa12.93□□□□□ -0.34
ECM1-206ENST00000496744 MYH4Q9Y623 1939 aa12.92□□□□□ -0.34
ECM1-206ENST00000496744 ATP2A1O14983 1001 aa12.92□□□□□ -0.34
ECM1-206ENST00000496744 FARP2O94887 1054 aaPredicted RBP12.92□□□□□ -0.34
ECM1-206ENST00000496744 SLC25A27O95847 323 aa12.92□□□□□ -0.34
ECM1-206ENST00000496744 TBC1D10CQ8IV04 446 aa12.92□□□□□ -0.34
ECM1-206ENST00000496744 TRPV1Q8NER1 839 aa12.92□□□□□ -0.34
ECM1-206ENST00000496744 GMCL1Q96IK5 515 aa12.92□□□□□ -0.34
ECM1-206ENST00000496744 DIAPH3Q9NSV4 1193 aa12.92□□□□□ -0.34
ECM1-206ENST00000496744 TCP11L1Q9NUJ3 509 aa12.92□□□□□ -0.34
ECM1-206ENST00000496744 FEM1BQ9UK73 627 aa12.92□□□□□ -0.34
ECM1-206ENST00000496744 OGDHLQ9ULD0 1010 aa12.92□□□□□ -0.34
ECM1-206ENST00000496744 COL11A1P12107 1806 aaPredicted RBP12.92□□□□□ -0.34
ECM1-206ENST00000496744 ZNF236Q9UL36 1845 aa12.91□□□□□ -0.34
ECM1-206ENST00000496744 HIP1O00291 1037 aa12.91□□□□□ -0.34
ECM1-206ENST00000496744 BMP3P12645 472 aa12.91□□□□□ -0.34
ECM1-206ENST00000496744 MCCP23508 829 aa12.91□□□□□ -0.34
ECM1-206ENST00000496744 CYP2C19P33261 490 aa12.91□□□□□ -0.34
ECM1-206ENST00000496744 MFAP1P55081 439 aaKnown RBP12.91□□□□□ -0.34
ECM1-206ENST00000496744 AKNAD1Q5T1N1 836 aa12.91□□□□□ -0.34
ECM1-206ENST00000496744 OLFML2BQ68BL8 750 aa12.91□□□□□ -0.34
ECM1-206ENST00000496744 RCSD1Q6JBY9 416 aa12.91□□□□□ -0.34
ECM1-206ENST00000496744 RASGRP2Q7LDG7 609 aa12.91□□□□□ -0.34
ECM1-206ENST00000496744 DPP9Q86TI2 863 aa12.91□□□□□ -0.34
ECM1-206ENST00000496744 DIS3LQ8TF46 1054 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms