RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 CORINQ9Y5Q5 1042 aa6.41□□□□□ -1.38
CD46-218ENST00000496723 UPK3BL1B0FP48 263 aa6.4□□□□□ -1.38
CD46-218ENST00000496723 UPK3BL2E5RIL1 263 aa6.4□□□□□ -1.38
CD46-218ENST00000496723 HOXA5P20719 270 aa6.4□□□□□ -1.38
CD46-218ENST00000496723 TNNI2P48788 182 aa6.4□□□□□ -1.38
CD46-218ENST00000496723 ZNF385BQ569K4 471 aa6.4□□□□□ -1.38
CD46-218ENST00000496723 ENOX1Q8TC92 643 aaKnown RBP6.4□□□□□ -1.38
CD46-218ENST00000496723 LINC01599Q8WXQ3 324 aa6.4□□□□□ -1.38
CD46-218ENST00000496723 RNF34Q969K3 372 aa6.4□□□□□ -1.38
CD46-218ENST00000496723 ZNF281Q9Y2X9 895 aa6.4□□□□□ -1.38
CD46-218ENST00000496723 SCAMP3O14828 347 aaKnown RBP6.39□□□□□ -1.39
CD46-218ENST00000496723 TLR3O15455 904 aaKnown RBP6.39□□□□□ -1.39
CD46-218ENST00000496723 PDE6BP35913 854 aa6.39□□□□□ -1.39
CD46-218ENST00000496723 BUD31P41223 144 aaPredicted RBP6.39□□□□□ -1.39
CD46-218ENST00000496723 TEKQ02763 1124 aa6.39□□□□□ -1.39
CD46-218ENST00000496723 MPP2Q14168 576 aa6.39□□□□□ -1.39
CD46-218ENST00000496723 FAM196AQ6ZSG2 479 aa6.39□□□□□ -1.39
CD46-218ENST00000496723 TMEM151BQ8IW70 566 aa6.39□□□□□ -1.39
CD46-218ENST00000496723 FBXO27Q8NI29 283 aa6.39□□□□□ -1.39
CD46-218ENST00000496723 ZNF296Q8WUU4 475 aaPredicted RBP6.39□□□□□ -1.39
CD46-218ENST00000496723 CCDC74BQ96LY2 380 aa6.39□□□□□ -1.39
CD46-218ENST00000496723 KREMEN1Q96MU8 473 aa6.39□□□□□ -1.39
CD46-218ENST00000496723 KCNQ5Q9NR82 932 aa6.39□□□□□ -1.39
CD46-218ENST00000496723 ADAMTS1Q9UHI8 967 aa6.39□□□□□ -1.39
CD46-218ENST00000496723 GPR160Q9UJ42 338 aa6.39□□□□□ -1.39
CD46-218ENST00000496723 CNOT6Q9ULM6 557 aaKnown RBP6.39□□□□□ -1.39
CD46-218ENST00000496723 SUPT16HQ9Y5B9 1047 aaKnown RBP6.39□□□□□ -1.39
CD46-218ENST00000496723 HRKO00198 91 aa6.38□□□□□ -1.39
CD46-218ENST00000496723 RFXAPO00287 272 aa6.38□□□□□ -1.39
CD46-218ENST00000496723 GRIN3BO60391 1043 aa6.38□□□□□ -1.39
CD46-218ENST00000496723 GREM1O60565 184 aa6.38□□□□□ -1.39
CD46-218ENST00000496723 LRRN2O75325 713 aa6.38□□□□□ -1.39
CD46-218ENST00000496723 ZNF394Q53GI3 561 aa6.38□□□□□ -1.39
CD46-218ENST00000496723 TCERG1LQ5VWI1 586 aa6.38□□□□□ -1.39
CD46-218ENST00000496723 USP48Q86UV5 1035 aa6.38□□□□□ -1.39
CD46-218ENST00000496723 RELTQ969Z4 430 aa6.38□□□□□ -1.39
CD46-218ENST00000496723 ZNF428Q96B54 188 aa6.38□□□□□ -1.39
CD46-218ENST00000496723 SHISA4Q96DD7 197 aa6.38□□□□□ -1.39
CD46-218ENST00000496723 C20orf173Q96LM9 149 aa6.38□□□□□ -1.39
CD46-218ENST00000496723 ZCCHC4Q9H5U6 513 aa6.38□□□□□ -1.39
CD46-218ENST00000496723 PCDHGB7Q9Y5F8 929 aa6.38□□□□□ -1.39
CD46-218ENST00000496723 ROBO2Q9HCK4 1378 aa6.37□□□□□ -1.39
CD46-218ENST00000496723 CLEC16AQ2KHT3 1053 aa6.37□□□□□ -1.39
CD46-218ENST00000496723 RNF111Q6ZNA4 994 aa6.37□□□□□ -1.39
CD46-218ENST00000496723 REC114Q7Z4M0 266 aa6.37□□□□□ -1.39
CD46-218ENST00000496723 KRTAP9-3Q9BYQ3 159 aa6.37□□□□□ -1.39
CD46-218ENST00000496723 ASCC2Q9H1I8 757 aaPredicted RBP6.37□□□□□ -1.39
CD46-218ENST00000496723 GCM1Q9NP62 436 aa6.37□□□□□ -1.39
CD46-218ENST00000496723 REV1Q9UBZ9 1251 aa6.37□□□□□ -1.39
CD46-218ENST00000496723 EBF1Q9UH73 591 aa6.37□□□□□ -1.39
CD46-218ENST00000496723 POLR3KQ9Y2Y1 108 aaPredicted RBP6.37□□□□□ -1.39
CD46-218ENST00000496723 OR14I1A6ND48 311 aa6.36□□□□□ -1.39
CD46-218ENST00000496723 PSPNO60542 156 aa6.36□□□□□ -1.39
CD46-218ENST00000496723 BMP7P18075 431 aa6.36□□□□□ -1.39
CD46-218ENST00000496723 CRKP46108 304 aa6.36□□□□□ -1.39
CD46-218ENST00000496723 CWF19L2Q2TBE0 894 aaKnown RBP6.36□□□□□ -1.39
CD46-218ENST00000496723 SPON2Q9BUD6 331 aa6.36□□□□□ -1.39
CD46-218ENST00000496723 UBP1Q9NZI7 540 aa6.36□□□□□ -1.39
CD46-218ENST00000496723 KCTD3Q9Y597 815 aa6.36□□□□□ -1.39
CD46-218ENST00000496723 SHISA3A0PJX4 238 aa6.35□□□□□ -1.39
CD46-218ENST00000496723 HTR3BO95264 441 aa6.35□□□□□ -1.39
CD46-218ENST00000496723 APOBRQ0VD83 1088 aa6.35□□□□□ -1.39
CD46-218ENST00000496723 C9orf131Q5VYM1 1079 aa6.35□□□□□ -1.39
CD46-218ENST00000496723 NLRX1Q86UT6 975 aa6.35□□□□□ -1.39
CD46-218ENST00000496723 KIAA0825Q8IV33 1275 aa6.35□□□□□ -1.39
CD46-218ENST00000496723 SYTL5Q8TDW5 730 aaPredicted RBP6.35□□□□□ -1.39
CD46-218ENST00000496723 VWCEQ96DN2 955 aa6.35□□□□□ -1.39
CD46-218ENST00000496723 KCNC2Q96PR1 638 aa6.35□□□□□ -1.39
CD46-218ENST00000496723 G6PC3Q9BUM1 346 aa6.35□□□□□ -1.39
CD46-218ENST00000496723 LRRC3Q9BY71 257 aa6.35□□□□□ -1.39
CD46-218ENST00000496723 CRTAC1Q9NQ79 661 aa6.35□□□□□ -1.39
CD46-218ENST00000496723 NOTOA8MTQ0 251 aa6.34□□□□□ -1.39
CD46-218ENST00000496723 CHURC1-FNTBB4DL54 471 aa6.34□□□□□ -1.39
CD46-218ENST00000496723 KIR2DL1P43626 348 aaPredicted RBP6.34□□□□□ -1.39
CD46-218ENST00000496723 KIR2DL2P43627 348 aaPredicted RBP6.34□□□□□ -1.39
CD46-218ENST00000496723 RBM25P49756 843 aaKnown RBP6.34□□□□□ -1.39
CD46-218ENST00000496723 CHMP4BP1P59074 171 aa6.34□□□□□ -1.39
CD46-218ENST00000496723 RACK1P63244 317 aaKnown RBP6.34□□□□□ -1.39
CD46-218ENST00000496723 HDLBPQ00341 1268 aaKnown RBP6.34□□□□□ -1.39
CD46-218ENST00000496723 NMIQ13287 307 aaPredicted RBP6.34□□□□□ -1.39
CD46-218ENST00000496723 MLECQ14165 292 aa6.34□□□□□ -1.39
CD46-218ENST00000496723 SEZ6Q53EL9 994 aa6.34□□□□□ -1.39
CD46-218ENST00000496723 METTL16Q86W50 562 aaKnown RBP6.34□□□□□ -1.39
CD46-218ENST00000496723 PHACTR4Q8IZ21 702 aa6.34□□□□□ -1.39
CD46-218ENST00000496723 MARCH10Q8NA82 808 aaPredicted RBP6.34□□□□□ -1.39
CD46-218ENST00000496723 DAGLBQ8NCG7 672 aa6.34□□□□□ -1.39
CD46-218ENST00000496723 EAF1Q96JC9 268 aaPredicted RBP6.34□□□□□ -1.39
CD46-218ENST00000496723 BRMS1Q9HCU9 246 aa6.34□□□□□ -1.39
CD46-218ENST00000496723 KLHL3Q9UH77 587 aa6.34□□□□□ -1.39
CD46-218ENST00000496723 DDX41Q9UJV9 622 aaKnown RBP6.34□□□□□ -1.39
CD46-218ENST00000496723 MCM4P33991 863 aa6.33□□□□□ -1.4
CD46-218ENST00000496723 RNF4P78317 190 aa6.33□□□□□ -1.4
CD46-218ENST00000496723 NT5DC4Q86YG4 428 aa6.33□□□□□ -1.4
CD46-218ENST00000496723 ZNF655Q8N720 491 aaPredicted RBP6.33□□□□□ -1.4
CD46-218ENST00000496723 NKD1Q969G9 470 aa6.33□□□□□ -1.4
CD46-218ENST00000496723 SIGLEC10Q96LC7 697 aa6.33□□□□□ -1.4
CD46-218ENST00000496723 SGPP1Q9BX95 441 aa6.33□□□□□ -1.4
CD46-218ENST00000496723 NT5C1AQ9BXI3 368 aa6.33□□□□□ -1.4
CD46-218ENST00000496723 PCDHB14Q9Y5E9 798 aa6.33□□□□□ -1.4
CD46-218ENST00000496723 RGS13O14921 159 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms