RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 CCDC87Q9NVE4 849 aa10.17□□□□□ -0.78
HPS4-217ENST00000496385 WWC3Q9ULE0 1092 aa10.17□□□□□ -0.78
HPS4-217ENST00000496385 NBPF26B4DH59 902 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 SEMA3EO15041 775 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 MFAP3LO75121 409 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 PPFIA3O75145 1194 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 ZBTB7AO95365 584 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 STARD3NLO95772 234 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 NNTQ13423 1086 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 SLC39A14Q15043 492 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 SLC5A9Q2M3M2 681 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 MYSM1Q5VVJ2 828 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 ANO1Q5XXA6 986 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 EMBQ6PCB8 327 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 NBPF15Q8N660 670 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 EHBP1Q8NDI1 1231 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 MICAL1Q8TDZ2 1067 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 CCDC114Q96M63 670 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 RUFY1Q96T51 708 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 CLIC4Q9Y696 253 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 CARMIL3Q8ND23 1372 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 FAM107AO95990 144 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 ERCC5P28715 1186 aaPredicted RBP10.16□□□□□ -0.78
HPS4-217ENST00000496385 COL9A3Q14050 684 aaPredicted RBP10.16□□□□□ -0.78
HPS4-217ENST00000496385 HDGFL1Q5TGJ6 251 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 CCDC102BQ68D86 513 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 CCDC121Q6ZUS5 278 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 COL23A1Q86Y22 540 aaPredicted RBP10.16□□□□□ -0.78
HPS4-217ENST00000496385 ZNF473Q8WTR7 871 aaKnown RBP10.16□□□□□ -0.78
HPS4-217ENST00000496385 CCDC47Q96A33 483 aaKnown RBP10.16□□□□□ -0.78
HPS4-217ENST00000496385 SAR1BQ9Y6B6 198 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 COL5A3P25940 1745 aaPredicted RBP10.16□□□□□ -0.78
HPS4-217ENST00000496385 PNPLA7Q6ZV29 1317 aa10.16□□□□□ -0.78
HPS4-217ENST00000496385 A0A0D9SFI3 127 aa10.15□□□□□ -0.78
HPS4-217ENST00000496385 MGRN1O60291 552 aa10.15□□□□□ -0.78
HPS4-217ENST00000496385 PBX1P40424 430 aa10.15□□□□□ -0.78
HPS4-217ENST00000496385 RPS6KA3P51812 740 aa10.15□□□□□ -0.78
HPS4-217ENST00000496385 XRCC4Q13426 336 aa10.15□□□□□ -0.78
HPS4-217ENST00000496385 LACTB2Q53H82 288 aaPredicted RBP10.15□□□□□ -0.78
HPS4-217ENST00000496385 NT5DC1Q5TFE4 455 aa10.15□□□□□ -0.78
HPS4-217ENST00000496385 ARMC9Q7Z3E5 817 aa10.15□□□□□ -0.78
HPS4-217ENST00000496385 OR8K1Q8NGG5 319 aa10.15□□□□□ -0.78
HPS4-217ENST00000496385 HAUS4Q9H6D7 363 aa10.15□□□□□ -0.78
HPS4-217ENST00000496385 SRP68Q9UHB9 627 aaKnown RBP10.15□□□□□ -0.78
HPS4-217ENST00000496385 TBC1D2BQ9UPU7 963 aa10.15□□□□□ -0.78
HPS4-217ENST00000496385 RTCBQ9Y3I0 505 aaKnown RBP10.15□□□□□ -0.78
HPS4-217ENST00000496385 NFE2L3Q9Y4A8 694 aa10.15□□□□□ -0.78
HPS4-217ENST00000496385 HSF2BPO75031 334 aa10.15□□□□□ -0.78
HPS4-217ENST00000496385 LSP1P33241 339 aa10.15□□□□□ -0.78
HPS4-217ENST00000496385 AIMP1Q12904 312 aaKnown RBP10.15□□□□□ -0.78
HPS4-217ENST00000496385 TRIM14Q14142 442 aa10.15□□□□□ -0.78
HPS4-217ENST00000496385 RNF187Q5TA31 235 aaPredicted RBP10.15□□□□□ -0.78
HPS4-217ENST00000496385 CYP26C1Q6V0L0 522 aa10.15□□□□□ -0.78
HPS4-217ENST00000496385 OSBPL9Q96SU4 736 aa10.15□□□□□ -0.78
HPS4-217ENST00000496385 FSD1Q9BTV5 496 aa10.15□□□□□ -0.78
HPS4-217ENST00000496385 EHD4Q9H223 541 aa10.15□□□□□ -0.78
HPS4-217ENST00000496385 EBF2Q9HAK2 575 aa10.15□□□□□ -0.78
HPS4-217ENST00000496385 CHPF2Q9P2E5 772 aa10.15□□□□□ -0.78
HPS4-217ENST00000496385 IQSEC3Q9UPP2 1182 aaPredicted RBP10.15□□□□□ -0.78
HPS4-217ENST00000496385 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.15□□□□□ -0.78
HPS4-217ENST00000496385 PPP1R37O75864 691 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 TNFRSF8P28908 595 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 EPHB4P54760 987 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 PTGISQ16647 500 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 NCAPH2Q6IBW4 605 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 PPP4R3AQ6IN85 833 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 MMGT1Q8N4V1 131 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 CAVIN3Q969G5 261 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 CDC5LQ99459 802 aaKnown RBP10.14□□□□□ -0.79
HPS4-217ENST00000496385 CENPHQ9H3R5 247 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 TPX2Q9ULW0 747 aaKnown RBP10.14□□□□□ -0.79
HPS4-217ENST00000496385 ATF5Q9Y2D1 282 aaPredicted RBP10.14□□□□□ -0.79
HPS4-217ENST00000496385 ANO9A1A5B4 782 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 AHCYL1O43865 530 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 GHRP10912 638 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 RIPK1Q13546 671 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 FAM228AQ86W67 206 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 APLFQ8IW19 511 aaPredicted RBP10.14□□□□□ -0.79
HPS4-217ENST00000496385 CD302Q8IX05 232 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 ARHGEF1Q92888 912 aaKnown RBP10.14□□□□□ -0.79
HPS4-217ENST00000496385 SPDL1Q96EA4 605 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.14□□□□□ -0.79
HPS4-217ENST00000496385 TAF6LQ9Y6J9 622 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 UTRNP46939 3433 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 ERICH2A1L162 156 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 DNAJC8O75937 253 aaPredicted RBP10.14□□□□□ -0.79
HPS4-217ENST00000496385 FESP07332 822 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 EXOSC10Q01780 885 aaKnown RBP10.14□□□□□ -0.79
HPS4-217ENST00000496385 RBL2Q08999 1139 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 RESP18Q5W5W9 173 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 NLRP14Q86W24 1093 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 ARFGAP2Q8N6H7 521 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 DRAXINQ8NBI3 349 aaPredicted RBP10.14□□□□□ -0.79
HPS4-217ENST00000496385 LMBR1Q8WVP7 490 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 BORCS6Q96GS4 357 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 CCT8L2Q96SF2 557 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 MOV10L1Q9BXT6 1211 aaKnown RBP10.14□□□□□ -0.79
HPS4-217ENST00000496385 KIF9Q9HAQ2 790 aa10.14□□□□□ -0.79
HPS4-217ENST00000496385 CORO1CQ9ULV4 474 aaPredicted RBP10.14□□□□□ -0.79
HPS4-217ENST00000496385 PCDHA5Q9Y5H7 936 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms