RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 MROH8Q9H579 483 aa18.7■□□□□ 0.58
HDAC4-213ENST00000496347 PPP1R9AQ9ULJ8 1098 aa18.7■□□□□ 0.58
HDAC4-213ENST00000496347 ADAMTS5Q9UNA0 930 aa18.7■□□□□ 0.58
HDAC4-213ENST00000496347 SUPT16HQ9Y5B9 1047 aaKnown RBP18.7■□□□□ 0.58
HDAC4-213ENST00000496347 A0A0D9SFI3 127 aa18.69■□□□□ 0.58
HDAC4-213ENST00000496347 TRIM6-TRIM34B2RNG4 842 aa18.69■□□□□ 0.58
HDAC4-213ENST00000496347 STRNO43815 780 aa18.69■□□□□ 0.58
HDAC4-213ENST00000496347 TTLL1O95922 423 aa18.69■□□□□ 0.58
HDAC4-213ENST00000496347 NDUFB10O96000 172 aa18.69■□□□□ 0.58
HDAC4-213ENST00000496347 TSPY3P0CV98 308 aa18.69■□□□□ 0.58
HDAC4-213ENST00000496347 TSPY8P0CW00 308 aa18.69■□□□□ 0.58
HDAC4-213ENST00000496347 ERCC3P19447 782 aa18.69■□□□□ 0.58
HDAC4-213ENST00000496347 COPB2P35606 906 aa18.69■□□□□ 0.58
HDAC4-213ENST00000496347 TRIM32Q13049 653 aa18.69■□□□□ 0.58
HDAC4-213ENST00000496347 MCMDC2Q4G0Z9 681 aa18.69■□□□□ 0.58
HDAC4-213ENST00000496347 FAM83BQ5T0W9 1011 aa18.69■□□□□ 0.58
HDAC4-213ENST00000496347 ABRAQ8N0Z2 381 aa18.69■□□□□ 0.58
HDAC4-213ENST00000496347 ANKLE1Q8NAG6 615 aa18.69■□□□□ 0.58
HDAC4-213ENST00000496347 NEDD1Q8NHV4 660 aa18.69■□□□□ 0.58
HDAC4-213ENST00000496347 CEP95Q96GE4 821 aa18.69■□□□□ 0.58
HDAC4-213ENST00000496347 MTMR4Q9NYA4 1195 aa18.69■□□□□ 0.58
HDAC4-213ENST00000496347 ANAPC4Q9UJX5 808 aa18.69■□□□□ 0.58
HDAC4-213ENST00000496347 RAD21O60216 631 aa18.68■□□□□ 0.58
HDAC4-213ENST00000496347 TFRCP02786 760 aaKnown RBP18.68■□□□□ 0.58
HDAC4-213ENST00000496347 ALX1Q15699 326 aa18.68■□□□□ 0.58
HDAC4-213ENST00000496347 PLEKHM2Q8IWE5 1019 aa18.68■□□□□ 0.58
HDAC4-213ENST00000496347 GMCL1P1Q8NEA9 526 aa18.68■□□□□ 0.58
HDAC4-213ENST00000496347 MKL1Q969V6 931 aa18.68■□□□□ 0.58
HDAC4-213ENST00000496347 FAM227BQ96M60 508 aa18.68■□□□□ 0.58
HDAC4-213ENST00000496347 SLF1Q9BQI6 1058 aa18.68■□□□□ 0.58
HDAC4-213ENST00000496347 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.68■□□□□ 0.58
HDAC4-213ENST00000496347 PLXNA1Q9UIW2 1896 aa18.68■□□□□ 0.58
HDAC4-213ENST00000496347 ALPK3Q96L96 1907 aa18.68■□□□□ 0.58
HDAC4-213ENST00000496347 CCDC171Q6TFL3 1326 aa18.68■□□□□ 0.58
HDAC4-213ENST00000496347 ZNFX1Q9P2E3 1918 aaKnown RBP18.67■□□□□ 0.58
HDAC4-213ENST00000496347 F5H6K3 240 aa18.67■□□□□ 0.58
HDAC4-213ENST00000496347 VWA5AO00534 786 aa18.67■□□□□ 0.58
HDAC4-213ENST00000496347 SLC25A27O95847 323 aa18.67■□□□□ 0.58
HDAC4-213ENST00000496347 ADORA2AP29274 412 aa18.67■□□□□ 0.58
HDAC4-213ENST00000496347 KLRC3Q07444 240 aa18.67■□□□□ 0.58
HDAC4-213ENST00000496347 PLS1Q14651 629 aa18.67■□□□□ 0.58
HDAC4-213ENST00000496347 TMEM132BQ14DG7 1078 aa18.67■□□□□ 0.58
HDAC4-213ENST00000496347 CCL14Q16627 93 aa18.67■□□□□ 0.58
HDAC4-213ENST00000496347 VPS53Q5VIR6 699 aa18.67■□□□□ 0.58
HDAC4-213ENST00000496347 MFSD14CQ5VZR4 134 aa18.67■□□□□ 0.58
HDAC4-213ENST00000496347 FBXO28Q9NVF7 368 aa18.67■□□□□ 0.58
HDAC4-213ENST00000496347 TRIOBPQ9H2D6 2365 aa18.66■□□□□ 0.58
HDAC4-213ENST00000496347 MFAP1P55081 439 aaKnown RBP18.66■□□□□ 0.58
HDAC4-213ENST00000496347 CACNB2Q08289 660 aaPredicted RBP18.66■□□□□ 0.58
HDAC4-213ENST00000496347 NMIQ13287 307 aaPredicted RBP18.66■□□□□ 0.58
HDAC4-213ENST00000496347 OLFML2BQ68BL8 750 aa18.66■□□□□ 0.58
HDAC4-213ENST00000496347 RIOX2Q8IUF8 465 aa18.66■□□□□ 0.58
HDAC4-213ENST00000496347 SLC5A4Q9NY91 659 aa18.66■□□□□ 0.58
HDAC4-213ENST00000496347 CLIP2Q9UDT6 1046 aa18.66■□□□□ 0.58
HDAC4-213ENST00000496347 ZNF214Q9UL59 606 aaPredicted RBP18.66■□□□□ 0.58
HDAC4-213ENST00000496347 OGDHLQ9ULD0 1010 aa18.66■□□□□ 0.58
HDAC4-213ENST00000496347 DNAH12Q6ZR08 3092 aa18.65■□□□□ 0.58
HDAC4-213ENST00000496347 ORC4O43929 436 aa18.65■□□□□ 0.58
HDAC4-213ENST00000496347 TFAP4Q01664 338 aa18.65■□□□□ 0.58
HDAC4-213ENST00000496347 SAMD1Q6SPF0 538 aaPredicted RBP18.65■□□□□ 0.58
HDAC4-213ENST00000496347 ZNF589Q86UQ0 364 aaPredicted RBP18.65■□□□□ 0.58
HDAC4-213ENST00000496347 NCAPG2Q86XI2 1143 aa18.65■□□□□ 0.58
HDAC4-213ENST00000496347 LRRC47Q8N1G4 583 aaKnown RBP18.65■□□□□ 0.58
HDAC4-213ENST00000496347 REPS2Q8NFH8 660 aa18.65■□□□□ 0.58
HDAC4-213ENST00000496347 RILPL2Q969X0 211 aa18.65■□□□□ 0.58
HDAC4-213ENST00000496347 NUP88Q99567 741 aaPredicted RBP18.65■□□□□ 0.58
HDAC4-213ENST00000496347 TSPY2A6NKD2 308 aa18.64■□□□□ 0.57
HDAC4-213ENST00000496347 HIP1O00291 1037 aa18.64■□□□□ 0.57
HDAC4-213ENST00000496347 IGHA2P01877 340 aa18.64■□□□□ 0.57
HDAC4-213ENST00000496347 HSPD1P10809 573 aaKnown RBP18.64■□□□□ 0.57
HDAC4-213ENST00000496347 PCP11498 1178 aaKnown RBP18.64■□□□□ 0.57
HDAC4-213ENST00000496347 FCER1AP12319 257 aa18.64■□□□□ 0.57
HDAC4-213ENST00000496347 FAM47AQ5JRC9 791 aa18.64■□□□□ 0.57
HDAC4-213ENST00000496347 NECAB2Q7Z6G3 386 aa18.64■□□□□ 0.57
HDAC4-213ENST00000496347 DPP9Q86TI2 863 aa18.64■□□□□ 0.57
HDAC4-213ENST00000496347 TEX13BQ9BXU2 312 aa18.64■□□□□ 0.57
HDAC4-213ENST00000496347 FLRT1Q9NZU1 646 aa18.64■□□□□ 0.57
HDAC4-213ENST00000496347 MSCO60682 206 aa18.63■□□□□ 0.57
HDAC4-213ENST00000496347 FGRP09769 529 aa18.63■□□□□ 0.57
HDAC4-213ENST00000496347 SDSP20132 328 aa18.63■□□□□ 0.57
HDAC4-213ENST00000496347 CTDSPL2Q05D32 466 aa18.63■□□□□ 0.57
HDAC4-213ENST00000496347 PRPF38AQ8NAV1 312 aaKnown RBP18.63■□□□□ 0.57
HDAC4-213ENST00000496347 NPLOC4Q8TAT6 608 aa18.63■□□□□ 0.57
HDAC4-213ENST00000496347 GMCL1Q96IK5 515 aa18.63■□□□□ 0.57
HDAC4-213ENST00000496347 DIAPH3Q9NSV4 1193 aa18.63■□□□□ 0.57
HDAC4-213ENST00000496347 FEM1BQ9UK73 627 aa18.63■□□□□ 0.57
HDAC4-213ENST00000496347 ATP2A1O14983 1001 aa18.62■□□□□ 0.57
HDAC4-213ENST00000496347 FGAP02671 866 aa18.62■□□□□ 0.57
HDAC4-213ENST00000496347 CCND3P30281 292 aaPredicted RBP18.62■□□□□ 0.57
HDAC4-213ENST00000496347 STAT3P40763 770 aa18.62■□□□□ 0.57
HDAC4-213ENST00000496347 DIS3LQ8TF46 1054 aaKnown RBP18.62■□□□□ 0.57
HDAC4-213ENST00000496347 DPF3Q92784 378 aa18.62■□□□□ 0.57
HDAC4-213ENST00000496347 H0YGN5 161 aa18.61■□□□□ 0.57
HDAC4-213ENST00000496347 RANBP6O60518 1105 aaKnown RBP18.61■□□□□ 0.57
HDAC4-213ENST00000496347 CYBAP13498 195 aa18.61■□□□□ 0.57
HDAC4-213ENST00000496347 NT5C2P49902 561 aa18.61■□□□□ 0.57
HDAC4-213ENST00000496347 OAZ1P54368 228 aa18.61■□□□□ 0.57
HDAC4-213ENST00000496347 KCTD2Q14681 263 aa18.61■□□□□ 0.57
HDAC4-213ENST00000496347 SLFN13Q68D06 897 aa18.61■□□□□ 0.57
HDAC4-213ENST00000496347 PAWRQ96IZ0 340 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms