RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 TMEM87BQ96K49 555 aa11.34□□□□□ -0.59
PRPF3-207ENST00000496202 TMEM47Q9BQJ4 181 aa11.34□□□□□ -0.59
PRPF3-207ENST00000496202 ASCC2Q9H1I8 757 aaPredicted RBP11.34□□□□□ -0.59
PRPF3-207ENST00000496202 FLOT1O75955 427 aa11.33□□□□□ -0.6
PRPF3-207ENST00000496202 CYP2C8P10632 490 aa11.33□□□□□ -0.6
PRPF3-207ENST00000496202 CASTP20810 708 aaKnown RBP11.33□□□□□ -0.6
PRPF3-207ENST00000496202 HOXA7P31268 230 aaPredicted RBP11.33□□□□□ -0.6
PRPF3-207ENST00000496202 CTCFP49711 727 aaPredicted RBP11.33□□□□□ -0.6
PRPF3-207ENST00000496202 ANTXR2P58335 489 aa11.33□□□□□ -0.6
PRPF3-207ENST00000496202 ADCK5Q3MIX3 580 aa11.33□□□□□ -0.6
PRPF3-207ENST00000496202 KIAA1755Q5JYT7 1200 aa11.33□□□□□ -0.6
PRPF3-207ENST00000496202 RCSD1Q6JBY9 416 aa11.33□□□□□ -0.6
PRPF3-207ENST00000496202 NFXL1Q6ZNB6 911 aa11.33□□□□□ -0.6
PRPF3-207ENST00000496202 DHX32Q7L7V1 743 aaKnown RBP11.33□□□□□ -0.6
PRPF3-207ENST00000496202 PNMA1Q8ND90 353 aa11.33□□□□□ -0.6
PRPF3-207ENST00000496202 NKX2-3Q8TAU0 364 aa11.33□□□□□ -0.6
PRPF3-207ENST00000496202 GTF3C2Q8WUA4 911 aaPredicted RBP11.33□□□□□ -0.6
PRPF3-207ENST00000496202 DCAF4Q8WV16 495 aa11.33□□□□□ -0.6
PRPF3-207ENST00000496202 CHMP4CQ96CF2 233 aa11.33□□□□□ -0.6
PRPF3-207ENST00000496202 GMCL1Q96IK5 515 aa11.33□□□□□ -0.6
PRPF3-207ENST00000496202 NUP88Q99567 741 aaPredicted RBP11.33□□□□□ -0.6
PRPF3-207ENST00000496202 MTA3Q9BTC8 594 aa11.33□□□□□ -0.6
PRPF3-207ENST00000496202 TSKSQ9UJT2 592 aa11.33□□□□□ -0.6
PRPF3-207ENST00000496202 WDR19Q8NEZ3 1342 aa11.33□□□□□ -0.6
PRPF3-207ENST00000496202 PCNTO95613 3336 aa11.32□□□□□ -0.6
PRPF3-207ENST00000496202 FOXN1O15353 648 aa11.32□□□□□ -0.6
PRPF3-207ENST00000496202 TLR2O60603 784 aa11.32□□□□□ -0.6
PRPF3-207ENST00000496202 SEC24BO95487 1268 aa11.32□□□□□ -0.6
PRPF3-207ENST00000496202 BMP3P12645 472 aa11.32□□□□□ -0.6
PRPF3-207ENST00000496202 GCLCP48506 637 aaPredicted RBP11.32□□□□□ -0.6
PRPF3-207ENST00000496202 NOVP48745 357 aa11.32□□□□□ -0.6
PRPF3-207ENST00000496202 ANAPC15P60006 121 aa11.32□□□□□ -0.6
PRPF3-207ENST00000496202 SEC23AQ15436 765 aa11.32□□□□□ -0.6
PRPF3-207ENST00000496202 CATSPERGQ6ZRH7 1159 aa11.32□□□□□ -0.6
PRPF3-207ENST00000496202 ANKS1AQ92625 1134 aa11.32□□□□□ -0.6
PRPF3-207ENST00000496202 CFHR5Q9BXR6 569 aa11.32□□□□□ -0.6
PRPF3-207ENST00000496202 FEM1BQ9UK73 627 aa11.32□□□□□ -0.6
PRPF3-207ENST00000496202 CTDP1Q9Y5B0 961 aaPredicted RBP11.32□□□□□ -0.6
PRPF3-207ENST00000496202 PARP14Q460N5 1801 aa11.31□□□□□ -0.6
PRPF3-207ENST00000496202 CASP8AP2Q9UKL3 1982 aa11.31□□□□□ -0.6
PRPF3-207ENST00000496202 CCDC69A6NI79 296 aa11.31□□□□□ -0.6
PRPF3-207ENST00000496202 SH2B2O14492 632 aaPredicted RBP11.31□□□□□ -0.6
PRPF3-207ENST00000496202 STAT2P52630 851 aa11.31□□□□□ -0.6
PRPF3-207ENST00000496202 HERVK_113P62684 666 aa11.31□□□□□ -0.6
PRPF3-207ENST00000496202 COG2Q14746 738 aa11.31□□□□□ -0.6
PRPF3-207ENST00000496202 SYNE3Q6ZMZ3 975 aa11.31□□□□□ -0.6
PRPF3-207ENST00000496202 CATIPQ7Z7H3 387 aa11.31□□□□□ -0.6
PRPF3-207ENST00000496202 FAM160B2Q86V87 743 aa11.31□□□□□ -0.6
PRPF3-207ENST00000496202 TMTC2Q8N394 836 aa11.31□□□□□ -0.6
PRPF3-207ENST00000496202 CHURC1Q8WUH1 139 aa11.31□□□□□ -0.6
PRPF3-207ENST00000496202 TCEANC2Q96MN5 208 aa11.31□□□□□ -0.6
PRPF3-207ENST00000496202 P2RX7Q99572 595 aaKnown RBP11.31□□□□□ -0.6
PRPF3-207ENST00000496202 SLF1Q9BQI6 1058 aa11.31□□□□□ -0.6
PRPF3-207ENST00000496202 PAGR1Q9BTK6 254 aa11.31□□□□□ -0.6
PRPF3-207ENST00000496202 LRRC2Q9BYS8 371 aa11.31□□□□□ -0.6
PRPF3-207ENST00000496202 HOXC10Q9NYD6 342 aa11.31□□□□□ -0.6
PRPF3-207ENST00000496202 CPA4Q9UI42 421 aa11.31□□□□□ -0.6
PRPF3-207ENST00000496202 NAP1L2Q9ULW6 460 aaPredicted RBP11.31□□□□□ -0.6
PRPF3-207ENST00000496202 CYP46A1Q9Y6A2 500 aa11.31□□□□□ -0.6
PRPF3-207ENST00000496202 MYPNQ86TC9 1320 aa11.31□□□□□ -0.6
PRPF3-207ENST00000496202 SPDYE16A6NNV3 312 aaPredicted RBP11.3□□□□□ -0.6
PRPF3-207ENST00000496202 TMEM232C9JQI7 657 aa11.3□□□□□ -0.6
PRPF3-207ENST00000496202 GPR25O00155 361 aa11.3□□□□□ -0.6
PRPF3-207ENST00000496202 FKTNO75072 461 aa11.3□□□□□ -0.6
PRPF3-207ENST00000496202 PARP1P09874 1014 aaKnown RBP11.3□□□□□ -0.6
PRPF3-207ENST00000496202 HSPA8P11142 646 aaKnown RBP11.3□□□□□ -0.6
PRPF3-207ENST00000496202 PDHBP11177 359 aa11.3□□□□□ -0.6
PRPF3-207ENST00000496202 CPA1P15085 419 aa11.3□□□□□ -0.6
PRPF3-207ENST00000496202 RPS6KB1P23443 525 aa11.3□□□□□ -0.6
PRPF3-207ENST00000496202 KIF22Q14807 665 aa11.3□□□□□ -0.6
PRPF3-207ENST00000496202 ASPRV1Q53RT3 343 aa11.3□□□□□ -0.6
PRPF3-207ENST00000496202 GPATCH4Q5T3I0 446 aaKnown RBP11.3□□□□□ -0.6
PRPF3-207ENST00000496202 KCTD1Q719H9 257 aa11.3□□□□□ -0.6
PRPF3-207ENST00000496202 ANKRD13CQ8N6S4 541 aa11.3□□□□□ -0.6
PRPF3-207ENST00000496202 MB21D1Q8N884 522 aa11.3□□□□□ -0.6
PRPF3-207ENST00000496202 IGDCC4Q8TDY8 1250 aa11.3□□□□□ -0.6
PRPF3-207ENST00000496202 KIFC2Q96AC6 838 aa11.3□□□□□ -0.6
PRPF3-207ENST00000496202 C22orf23Q9BZE7 217 aa11.3□□□□□ -0.6
PRPF3-207ENST00000496202 TM6SF1Q9BZW5 370 aa11.3□□□□□ -0.6
PRPF3-207ENST00000496202 R3HDMLQ9H3Y0 253 aa11.3□□□□□ -0.6
PRPF3-207ENST00000496202 LY9Q9HBG7 655 aa11.3□□□□□ -0.6
PRPF3-207ENST00000496202 GPCPD1Q9NPB8 672 aa11.3□□□□□ -0.6
PRPF3-207ENST00000496202 GPHNQ9NQX3 736 aaPredicted RBP11.3□□□□□ -0.6
PRPF3-207ENST00000496202 FBXO28Q9NVF7 368 aa11.3□□□□□ -0.6
PRPF3-207ENST00000496202 PPP1R9AQ9ULJ8 1098 aa11.3□□□□□ -0.6
PRPF3-207ENST00000496202 FRMPD2Q68DX3 1309 aaPredicted RBP11.3□□□□□ -0.6
PRPF3-207ENST00000496202 ADGRA2Q96PE1 1338 aa11.3□□□□□ -0.6
PRPF3-207ENST00000496202 RLFQ13129 1914 aa11.29□□□□□ -0.6
PRPF3-207ENST00000496202 BAZ2BQ9UIF8 2168 aaKnown RBP11.29□□□□□ -0.6
PRPF3-207ENST00000496202 DHX16O60231 1041 aaKnown RBP11.29□□□□□ -0.6
PRPF3-207ENST00000496202 DDAH1O94760 285 aa11.29□□□□□ -0.6
PRPF3-207ENST00000496202 DSG3P32926 999 aa11.29□□□□□ -0.6
PRPF3-207ENST00000496202 LIFRP42702 1097 aa11.29□□□□□ -0.6
PRPF3-207ENST00000496202 LBX1P52954 281 aa11.29□□□□□ -0.6
PRPF3-207ENST00000496202 EXOSC10Q01780 885 aaKnown RBP11.29□□□□□ -0.6
PRPF3-207ENST00000496202 SP3Q02447 781 aa11.29□□□□□ -0.6
PRPF3-207ENST00000496202 ZNF543Q08ER8 600 aa11.29□□□□□ -0.6
PRPF3-207ENST00000496202 FAM110CQ1W6H9 321 aa11.29□□□□□ -0.6
PRPF3-207ENST00000496202 NOM1Q5C9Z4 860 aaKnown RBP11.29□□□□□ -0.6
PRPF3-207ENST00000496202 RUFY3Q7L099 469 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms