RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 NUCB1Q02818 461 aa12.49□□□□□ -0.41
ERGIC3-219ENST00000496172 PDE4BQ07343 736 aa12.49□□□□□ -0.41
ERGIC3-219ENST00000496172 TRIM32Q13049 653 aa12.49□□□□□ -0.41
ERGIC3-219ENST00000496172 COG2Q14746 738 aa12.49□□□□□ -0.41
ERGIC3-219ENST00000496172 STK11IPQ8N1F8 1099 aa12.49□□□□□ -0.41
ERGIC3-219ENST00000496172 SOCS4Q8WXH5 440 aa12.49□□□□□ -0.41
ERGIC3-219ENST00000496172 SEC62Q99442 399 aaKnown RBP12.49□□□□□ -0.41
ERGIC3-219ENST00000496172 CDX2Q99626 313 aaPredicted RBP12.49□□□□□ -0.41
ERGIC3-219ENST00000496172 NUDT12Q9BQG2 462 aa12.49□□□□□ -0.41
ERGIC3-219ENST00000496172 NAPBQ9H115 298 aa12.49□□□□□ -0.41
ERGIC3-219ENST00000496172 GOPCQ9HD26 462 aa12.49□□□□□ -0.41
ERGIC3-219ENST00000496172 SMIM22K7EJ46 135 aa12.48□□□□□ -0.41
ERGIC3-219ENST00000496172 RAD21O60216 631 aa12.48□□□□□ -0.41
ERGIC3-219ENST00000496172 EEF2P13639 858 aaKnown RBP12.48□□□□□ -0.41
ERGIC3-219ENST00000496172 LRRC26Q2I0M4 334 aa12.48□□□□□ -0.41
ERGIC3-219ENST00000496172 Q3C1V9 767 aa12.48□□□□□ -0.41
ERGIC3-219ENST00000496172 LBX2Q6XYB7 198 aa12.48□□□□□ -0.41
ERGIC3-219ENST00000496172 PLEKHH3Q7Z736 793 aa12.48□□□□□ -0.41
ERGIC3-219ENST00000496172 TRMT44Q8IYL2 757 aaKnown RBP12.48□□□□□ -0.41
ERGIC3-219ENST00000496172 RILPL2Q969X0 211 aa12.48□□□□□ -0.41
ERGIC3-219ENST00000496172 VCPKMTQ9H867 229 aa12.48□□□□□ -0.41
ERGIC3-219ENST00000496172 HELLSQ9NRZ9 838 aa12.48□□□□□ -0.41
ERGIC3-219ENST00000496172 MYH8P13535 1937 aa12.48□□□□□ -0.41
ERGIC3-219ENST00000496172 ROBO3Q96MS0 1386 aa12.47□□□□□ -0.41
ERGIC3-219ENST00000496172 SPDYE16A6NNV3 312 aaPredicted RBP12.47□□□□□ -0.41
ERGIC3-219ENST00000496172 WDR46O15213 610 aaKnown RBP12.47□□□□□ -0.41
ERGIC3-219ENST00000496172 PEX10O60683 326 aa12.47□□□□□ -0.41
ERGIC3-219ENST00000496172 PRKAR2AP13861 404 aaKnown RBP12.47□□□□□ -0.41
ERGIC3-219ENST00000496172 RASA1P20936 1047 aa12.47□□□□□ -0.41
ERGIC3-219ENST00000496172 WDR78Q5VTH9 848 aa12.47□□□□□ -0.41
ERGIC3-219ENST00000496172 GPR142Q7Z601 462 aa12.47□□□□□ -0.41
ERGIC3-219ENST00000496172 CLEC10AQ8IUN9 316 aa12.47□□□□□ -0.41
ERGIC3-219ENST00000496172 SIAH1Q8IUQ4 282 aa12.47□□□□□ -0.41
ERGIC3-219ENST00000496172 SPICE1Q8N0Z3 855 aa12.47□□□□□ -0.41
ERGIC3-219ENST00000496172 MB21D1Q8N884 522 aa12.47□□□□□ -0.41
ERGIC3-219ENST00000496172 FAM161BQ96MY7 647 aa12.47□□□□□ -0.41
ERGIC3-219ENST00000496172 EPB41L4AQ9HCS5 686 aaPredicted RBP12.47□□□□□ -0.41
ERGIC3-219ENST00000496172 TMEM265A0A087WTH1 108 aa12.46□□□□□ -0.41
ERGIC3-219ENST00000496172 FLOT1O75955 427 aa12.46□□□□□ -0.41
ERGIC3-219ENST00000496172 CYP2B6P20813 491 aa12.46□□□□□ -0.41
ERGIC3-219ENST00000496172 PLA2G5P39877 138 aa12.46□□□□□ -0.41
ERGIC3-219ENST00000496172 RGS2P41220 211 aa12.46□□□□□ -0.41
ERGIC3-219ENST00000496172 PPARAQ07869 468 aa12.46□□□□□ -0.41
ERGIC3-219ENST00000496172 MCMDC2Q4G0Z9 681 aa12.46□□□□□ -0.41
ERGIC3-219ENST00000496172 LHX8Q68G74 356 aa12.46□□□□□ -0.41
ERGIC3-219ENST00000496172 LBHD1Q9BQE6 289 aaPredicted RBP12.46□□□□□ -0.41
ERGIC3-219ENST00000496172 PORCNQ9H237 461 aa12.46□□□□□ -0.41
ERGIC3-219ENST00000496172 SEMA6BQ9H3T3 888 aa12.46□□□□□ -0.41
ERGIC3-219ENST00000496172 IVNS1ABPQ9Y6Y0 642 aa12.46□□□□□ -0.41
ERGIC3-219ENST00000496172 RLFQ13129 1914 aa12.45□□□□□ -0.42
ERGIC3-219ENST00000496172 TNFRSF10AO00220 468 aa12.45□□□□□ -0.42
ERGIC3-219ENST00000496172 PRDM1O75626 825 aa12.45□□□□□ -0.42
ERGIC3-219ENST00000496172 CNMDO75829 334 aa12.45□□□□□ -0.42
ERGIC3-219ENST00000496172 TSPY3P0CV98 308 aa12.45□□□□□ -0.42
ERGIC3-219ENST00000496172 TSPY8P0CW00 308 aa12.45□□□□□ -0.42
ERGIC3-219ENST00000496172 DSG3P32926 999 aa12.45□□□□□ -0.42
ERGIC3-219ENST00000496172 MFAP1P55081 439 aaKnown RBP12.45□□□□□ -0.42
ERGIC3-219ENST00000496172 SMAD3P84022 425 aaKnown RBP12.45□□□□□ -0.42
ERGIC3-219ENST00000496172 TJAP1Q5JTD0 557 aa12.45□□□□□ -0.42
ERGIC3-219ENST00000496172 PPP4R3BQ5MIZ7 849 aa12.45□□□□□ -0.42
ERGIC3-219ENST00000496172 POTEEQ6S8J3 1075 aa12.45□□□□□ -0.42
ERGIC3-219ENST00000496172 SAMD1Q6SPF0 538 aaPredicted RBP12.45□□□□□ -0.42
ERGIC3-219ENST00000496172 CCDC129Q6ZRS4 1044 aa12.45□□□□□ -0.42
ERGIC3-219ENST00000496172 PLEKHM2Q8IWE5 1019 aa12.45□□□□□ -0.42
ERGIC3-219ENST00000496172 OSBPL3Q9H4L5 887 aa12.45□□□□□ -0.42
ERGIC3-219ENST00000496172 BTBD7Q9P203 1132 aa12.45□□□□□ -0.42
ERGIC3-219ENST00000496172 NYAP2Q9P242 653 aa12.45□□□□□ -0.42
ERGIC3-219ENST00000496172 BDP1A6H8Y1 2624 aa12.45□□□□□ -0.42
ERGIC3-219ENST00000496172 SLC15A5A6NIM6 579 aa12.44□□□□□ -0.42
ERGIC3-219ENST00000496172 ZKSCAN1P17029 563 aaPredicted RBP12.44□□□□□ -0.42
ERGIC3-219ENST00000496172 PLS1Q14651 629 aa12.44□□□□□ -0.42
ERGIC3-219ENST00000496172 KIAA1755Q5JYT7 1200 aa12.44□□□□□ -0.42
ERGIC3-219ENST00000496172 MORN1Q5T089 497 aa12.44□□□□□ -0.42
ERGIC3-219ENST00000496172 APBA2Q99767 749 aa12.44□□□□□ -0.42
ERGIC3-219ENST00000496172 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.44□□□□□ -0.42
ERGIC3-219ENST00000496172 TTYH1Q9H313 450 aaPredicted RBP12.44□□□□□ -0.42
ERGIC3-219ENST00000496172 CLIP2Q9UDT6 1046 aa12.44□□□□□ -0.42
ERGIC3-219ENST00000496172 HIP1O00291 1037 aa12.43□□□□□ -0.42
ERGIC3-219ENST00000496172 STRNO43815 780 aa12.43□□□□□ -0.42
ERGIC3-219ENST00000496172 TTLL1O95922 423 aa12.43□□□□□ -0.42
ERGIC3-219ENST00000496172 SDSP20132 328 aa12.43□□□□□ -0.42
ERGIC3-219ENST00000496172 PTPREP23469 700 aa12.43□□□□□ -0.42
ERGIC3-219ENST00000496172 IRX6P78412 446 aaPredicted RBP12.43□□□□□ -0.42
ERGIC3-219ENST00000496172 TFAP4Q01664 338 aa12.43□□□□□ -0.42
ERGIC3-219ENST00000496172 CACNB2Q08289 660 aaPredicted RBP12.43□□□□□ -0.42
ERGIC3-219ENST00000496172 MAP2K5Q13163 448 aa12.43□□□□□ -0.42
ERGIC3-219ENST00000496172 ALX1Q15699 326 aa12.43□□□□□ -0.42
ERGIC3-219ENST00000496172 SHCBP1Q8NEM2 672 aa12.43□□□□□ -0.42
ERGIC3-219ENST00000496172 NEDD1Q8NHV4 660 aa12.43□□□□□ -0.42
ERGIC3-219ENST00000496172 MYLIPQ8WY64 445 aa12.43□□□□□ -0.42
ERGIC3-219ENST00000496172 USP6NLQ92738 828 aa12.43□□□□□ -0.42
ERGIC3-219ENST00000496172 FAM227BQ96M60 508 aa12.43□□□□□ -0.42
ERGIC3-219ENST00000496172 SPATC1LQ9H0A9 340 aa12.43□□□□□ -0.42
ERGIC3-219ENST00000496172 MROH8Q9H579 483 aa12.43□□□□□ -0.42
ERGIC3-219ENST00000496172 SYNPO2Q9UMS6 1093 aa12.43□□□□□ -0.42
ERGIC3-219ENST00000496172 IGKV6D-41A0A0C4DH26 115 aa12.42□□□□□ -0.42
ERGIC3-219ENST00000496172 A0A0D9SFI3 127 aa12.42□□□□□ -0.42
ERGIC3-219ENST00000496172 TSPY2A6NKD2 308 aa12.42□□□□□ -0.42
ERGIC3-219ENST00000496172 F5H6K3 240 aa12.42□□□□□ -0.42
ERGIC3-219ENST00000496172 SLC25A27O95847 323 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms