RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 GP6Q9HCN6 339 aa7.85□□□□□ -1.15
SSR3-208ENST00000496050 PRDM5Q9NQX1 630 aaPredicted RBP7.85□□□□□ -1.15
SSR3-208ENST00000496050 GTF2IRD1Q9UHL9 959 aa7.85□□□□□ -1.15
SSR3-208ENST00000496050 DIS3Q9Y2L1 958 aaKnown RBP7.85□□□□□ -1.15
SSR3-208ENST00000496050 RAXQ9Y2V3 346 aa7.85□□□□□ -1.15
SSR3-208ENST00000496050 C1QTNF9BB2RNN3 333 aa7.84□□□□□ -1.15
SSR3-208ENST00000496050 FAM87AP0C7U9 286 aa7.84□□□□□ -1.15
SSR3-208ENST00000496050 GATA4P43694 442 aa7.84□□□□□ -1.15
SSR3-208ENST00000496050 TMEM67Q5HYA8 995 aa7.84□□□□□ -1.15
SSR3-208ENST00000496050 KIAA0907Q7Z7F0 614 aaPredicted RBP7.84□□□□□ -1.15
SSR3-208ENST00000496050 CRACR2BQ8N4Y2 399 aaPredicted RBP7.84□□□□□ -1.15
SSR3-208ENST00000496050 DCAF5Q96JK2 942 aa7.84□□□□□ -1.15
SSR3-208ENST00000496050 TBC1D32Q96NH3 1257 aa7.84□□□□□ -1.15
SSR3-208ENST00000496050 CDC6Q99741 560 aa7.84□□□□□ -1.15
SSR3-208ENST00000496050 ASCC2Q9H1I8 757 aaPredicted RBP7.84□□□□□ -1.15
SSR3-208ENST00000496050 PRR13Q9NZ81 148 aa7.84□□□□□ -1.15
SSR3-208ENST00000496050 AKT3Q9Y243 479 aa7.84□□□□□ -1.15
SSR3-208ENST00000496050 TRAV20A0A0B4J274 112 aa7.83□□□□□ -1.16
SSR3-208ENST00000496050 ADCY3O60266 1144 aa7.83□□□□□ -1.16
SSR3-208ENST00000496050 LEFTY1O75610 366 aa7.83□□□□□ -1.16
SSR3-208ENST00000496050 ITGAVP06756 1048 aa7.83□□□□□ -1.16
SSR3-208ENST00000496050 KIR3DL1P43629 444 aa7.83□□□□□ -1.16
SSR3-208ENST00000496050 CHRNA4P43681 627 aa7.83□□□□□ -1.16
SSR3-208ENST00000496050 GYS2P54840 703 aa7.83□□□□□ -1.16
SSR3-208ENST00000496050 CYP27A1Q02318 531 aa7.83□□□□□ -1.16
SSR3-208ENST00000496050 SCUBE1Q8IWY4 988 aa7.83□□□□□ -1.16
SSR3-208ENST00000496050 ARHGEF39Q8N4T4 335 aa7.83□□□□□ -1.16
SSR3-208ENST00000496050 TP53INP1Q96A56 240 aa7.83□□□□□ -1.16
SSR3-208ENST00000496050 FEZ1Q99689 392 aa7.83□□□□□ -1.16
SSR3-208ENST00000496050 APEX2Q9UBZ4 518 aa7.83□□□□□ -1.16
SSR3-208ENST00000496050 PRKAB1Q9Y478 270 aa7.83□□□□□ -1.16
SSR3-208ENST00000496050 IGF2BP3O00425 579 aaKnown RBP eCLIP7.82□□□□□ -1.16
SSR3-208ENST00000496050 PPM1GO15355 546 aaPredicted RBP7.82□□□□□ -1.16
SSR3-208ENST00000496050 LRRN2O75325 713 aa7.82□□□□□ -1.16
SSR3-208ENST00000496050 ASMTLO95671 621 aa7.82□□□□□ -1.16
SSR3-208ENST00000496050 CBX7O95931 251 aa7.82□□□□□ -1.16
SSR3-208ENST00000496050 ZNF445P59923 1031 aa7.82□□□□□ -1.16
SSR3-208ENST00000496050 DUSP27Q5VZP5 1158 aa7.82□□□□□ -1.16
SSR3-208ENST00000496050 FAM214BQ7L5A3 538 aa7.82□□□□□ -1.16
SSR3-208ENST00000496050 ZAR1Q86SH2 424 aa7.82□□□□□ -1.16
SSR3-208ENST00000496050 ZNF513Q8N8E2 541 aaPredicted RBP7.82□□□□□ -1.16
SSR3-208ENST00000496050 SYTL5Q8TDW5 730 aaPredicted RBP7.82□□□□□ -1.16
SSR3-208ENST00000496050 AARSD1Q9BTE6 412 aaKnown RBP7.82□□□□□ -1.16
SSR3-208ENST00000496050 DHRS4Q9BTZ2 278 aa7.82□□□□□ -1.16
SSR3-208ENST00000496050 PRDM14Q9GZV8 571 aa7.82□□□□□ -1.16
SSR3-208ENST00000496050 FHOD1Q9Y613 1164 aa7.82□□□□□ -1.16
SSR3-208ENST00000496050 HMX2A2RU54 273 aa7.81□□□□□ -1.16
SSR3-208ENST00000496050 SHOXO15266 292 aa7.81□□□□□ -1.16
SSR3-208ENST00000496050 PPP2R2AP63151 447 aa7.81□□□□□ -1.16
SSR3-208ENST00000496050 ZNF227Q86WZ6 799 aa7.81□□□□□ -1.16
SSR3-208ENST00000496050 ANKRD13AQ8IZ07 590 aa7.81□□□□□ -1.16
SSR3-208ENST00000496050 ADCY4Q8NFM4 1077 aa7.81□□□□□ -1.16
SSR3-208ENST00000496050 BRF1Q92994 677 aa7.81□□□□□ -1.16
SSR3-208ENST00000496050 CCDC140Q96MF4 163 aa7.81□□□□□ -1.16
SSR3-208ENST00000496050 C7orf69Q9H7B7 122 aa7.81□□□□□ -1.16
SSR3-208ENST00000496050 ARHGEF4Q9NR80 690 aa7.81□□□□□ -1.16
SSR3-208ENST00000496050 SF3B6Q9Y3B4 125 aaKnown RBP7.81□□□□□ -1.16
SSR3-208ENST00000496050 EMC9Q9Y3B6 208 aa7.81□□□□□ -1.16
SSR3-208ENST00000496050 CNTNAP4Q9C0A0 1308 aa7.8□□□□□ -1.16
SSR3-208ENST00000496050 IBSPP21815 317 aaPredicted RBP7.8□□□□□ -1.16
SSR3-208ENST00000496050 L1CAMP32004 1257 aa7.8□□□□□ -1.16
SSR3-208ENST00000496050 ADMP35318 185 aa7.8□□□□□ -1.16
SSR3-208ENST00000496050 NSMFQ6X4W1 530 aa7.8□□□□□ -1.16
SSR3-208ENST00000496050 ZCRB1Q8TBF4 217 aaKnown RBP7.8□□□□□ -1.16
SSR3-208ENST00000496050 PIWIL2Q8TC59 973 aaKnown RBP7.8□□□□□ -1.16
SSR3-208ENST00000496050 ENOX1Q8TC92 643 aaKnown RBP7.8□□□□□ -1.16
SSR3-208ENST00000496050 GATA6Q92908 595 aa7.8□□□□□ -1.16
SSR3-208ENST00000496050 MRGPRX3Q96LB0 322 aa7.8□□□□□ -1.16
SSR3-208ENST00000496050 SPC25Q9HBM1 224 aa7.8□□□□□ -1.16
SSR3-208ENST00000496050 TRBV23-1A0A0A0MS06 115 aa7.79□□□□□ -1.16
SSR3-208ENST00000496050 GNAT3A8MTJ3 354 aa7.79□□□□□ -1.16
SSR3-208ENST00000496050 DNAJC6O75061 913 aa7.79□□□□□ -1.16
SSR3-208ENST00000496050 FGFR1P11362 822 aa7.79□□□□□ -1.16
SSR3-208ENST00000496050 PPP2R5DQ14738 602 aa7.79□□□□□ -1.16
SSR3-208ENST00000496050 FAM209AQ5JX71 171 aa7.79□□□□□ -1.16
SSR3-208ENST00000496050 RNF43Q68DV7 783 aa7.79□□□□□ -1.16
SSR3-208ENST00000496050 C22orf34Q6ZV56 151 aa7.79□□□□□ -1.16
SSR3-208ENST00000496050 TRIM59Q8IWR1 403 aa7.79□□□□□ -1.16
SSR3-208ENST00000496050 FIBCD1Q8N539 461 aa7.79□□□□□ -1.16
SSR3-208ENST00000496050 DTWD2Q8NBA8 298 aa7.79□□□□□ -1.16
SSR3-208ENST00000496050 HEXIM2Q96MH2 286 aaKnown RBP7.79□□□□□ -1.16
SSR3-208ENST00000496050 DSCC1Q9BVC3 393 aa7.79□□□□□ -1.16
SSR3-208ENST00000496050 NOL6Q9H6R4 1146 aaKnown RBP7.79□□□□□ -1.16
SSR3-208ENST00000496050 IFT57Q9NWB7 429 aa7.79□□□□□ -1.16
SSR3-208ENST00000496050 GFOD1Q9NXC2 390 aa7.79□□□□□ -1.16
SSR3-208ENST00000496050 PRODHO43272 600 aa7.78□□□□□ -1.16
SSR3-208ENST00000496050 SIGLEC6O43699 453 aa7.78□□□□□ -1.16
SSR3-208ENST00000496050 KCNH1O95259 989 aa7.78□□□□□ -1.16
SSR3-208ENST00000496050 HOXC12P31275 282 aa7.78□□□□□ -1.16
SSR3-208ENST00000496050 SNW1Q13573 536 aaKnown RBP7.78□□□□□ -1.16
SSR3-208ENST00000496050 CLEC16AQ2KHT3 1053 aa7.78□□□□□ -1.16
SSR3-208ENST00000496050 FOXB2Q5VYV0 432 aa7.78□□□□□ -1.16
SSR3-208ENST00000496050 PRR23CQ6ZRP0 262 aa7.78□□□□□ -1.16
SSR3-208ENST00000496050 FILIP1Q7Z7B0 1213 aa7.78□□□□□ -1.16
SSR3-208ENST00000496050 FBXL6Q8N531 539 aa7.78□□□□□ -1.16
SSR3-208ENST00000496050 KISS1RQ969F8 398 aaPredicted RBP7.78□□□□□ -1.16
SSR3-208ENST00000496050 Q96M66 194 aa7.78□□□□□ -1.16
SSR3-208ENST00000496050 CHST7Q9NS84 486 aa7.78□□□□□ -1.16
SSR3-208ENST00000496050 STK17AQ9UEE5 414 aa7.78□□□□□ -1.16
SSR3-208ENST00000496050 CGGBP1Q9UFW8 167 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms