RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.48■□□□□ 0.39
GAPDH-210ENST00000496049 CTCFLQ8NI51 663 aaPredicted RBP17.48■□□□□ 0.39
GAPDH-210ENST00000496049 NUP133Q8WUM0 1156 aa17.48■□□□□ 0.39
GAPDH-210ENST00000496049 GTF3C6Q969F1 213 aa17.48■□□□□ 0.39
GAPDH-210ENST00000496049 FEZ1Q99689 392 aa17.48■□□□□ 0.39
GAPDH-210ENST00000496049 TMEM47Q9BQJ4 181 aa17.48■□□□□ 0.39
GAPDH-210ENST00000496049 CFHR5Q9BXR6 569 aa17.48■□□□□ 0.39
GAPDH-210ENST00000496049 COL25A1Q9BXS0 654 aaPredicted RBP17.48■□□□□ 0.39
GAPDH-210ENST00000496049 CLIP2Q9UDT6 1046 aa17.48■□□□□ 0.39
GAPDH-210ENST00000496049 BRPF3Q9ULD4 1205 aa17.48■□□□□ 0.39
GAPDH-210ENST00000496049 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.48■□□□□ 0.39
GAPDH-210ENST00000496049 UNC80Q8N2C7 3258 aa17.48■□□□□ 0.39
GAPDH-210ENST00000496049 CPLX1O14810 134 aa17.47■□□□□ 0.39
GAPDH-210ENST00000496049 CDKL5O76039 1030 aa17.47■□□□□ 0.39
GAPDH-210ENST00000496049 MYCP01106 439 aaPredicted RBP17.47■□□□□ 0.39
GAPDH-210ENST00000496049 EEF2P13639 858 aaKnown RBP17.47■□□□□ 0.39
GAPDH-210ENST00000496049 INPP5BP32019 993 aa17.47■□□□□ 0.39
GAPDH-210ENST00000496049 MAP3K9P80192 1104 aa17.47■□□□□ 0.39
GAPDH-210ENST00000496049 RRP1BQ14684 758 aaKnown RBP17.47■□□□□ 0.39
GAPDH-210ENST00000496049 RTN1Q16799 776 aa17.47■□□□□ 0.39
GAPDH-210ENST00000496049 CD99L2Q8TCZ2 262 aa17.47■□□□□ 0.39
GAPDH-210ENST00000496049 SENP2Q9HC62 589 aa17.47■□□□□ 0.39
GAPDH-210ENST00000496049 GOPCQ9HD26 462 aa17.47■□□□□ 0.39
GAPDH-210ENST00000496049 RBM28Q9NW13 759 aaKnown RBP17.47■□□□□ 0.39
GAPDH-210ENST00000496049 USP17L5A8MUK1 530 aa17.46■□□□□ 0.39
GAPDH-210ENST00000496049 SOX1O00570 391 aaPredicted RBP17.46■□□□□ 0.39
GAPDH-210ENST00000496049 LARGE1O95461 756 aa17.46■□□□□ 0.39
GAPDH-210ENST00000496049 GUCY1A2P33402 732 aa17.46■□□□□ 0.39
GAPDH-210ENST00000496049 CLEC10AQ8IUN9 316 aa17.46■□□□□ 0.39
GAPDH-210ENST00000496049 CCDC83Q8IWF9 413 aa17.46■□□□□ 0.39
GAPDH-210ENST00000496049 ANKRD13AQ8IZ07 590 aa17.46■□□□□ 0.39
GAPDH-210ENST00000496049 LRRC47Q8N1G4 583 aaKnown RBP17.46■□□□□ 0.39
GAPDH-210ENST00000496049 MAP3K14Q99558 947 aa17.46■□□□□ 0.39
GAPDH-210ENST00000496049 MYL10Q9BUA6 226 aa17.46■□□□□ 0.39
GAPDH-210ENST00000496049 UNCXA6NJT0 531 aa17.45■□□□□ 0.38
GAPDH-210ENST00000496049 USP2O75604 605 aaPredicted RBP17.45■□□□□ 0.38
GAPDH-210ENST00000496049 CCT2P78371 535 aaKnown RBP17.45■□□□□ 0.38
GAPDH-210ENST00000496049 CUL4AQ13619 759 aa17.45■□□□□ 0.38
GAPDH-210ENST00000496049 MAP3K11Q16584 847 aa17.45■□□□□ 0.38
GAPDH-210ENST00000496049 SHROOM1Q2M3G4 852 aaPredicted RBP17.45■□□□□ 0.38
GAPDH-210ENST00000496049 ZKSCAN4Q969J2 545 aaPredicted RBP17.45■□□□□ 0.38
GAPDH-210ENST00000496049 MKL1Q969V6 931 aa17.45■□□□□ 0.38
GAPDH-210ENST00000496049 INTS4Q96HW7 963 aaKnown RBP17.45■□□□□ 0.38
GAPDH-210ENST00000496049 LRCH3Q96II8 777 aa17.45■□□□□ 0.38
GAPDH-210ENST00000496049 RAD21O60216 631 aa17.44■□□□□ 0.38
GAPDH-210ENST00000496049 GNAQP50148 359 aa17.44■□□□□ 0.38
GAPDH-210ENST00000496049 SCRN1Q12765 414 aa17.44■□□□□ 0.38
GAPDH-210ENST00000496049 TROAPQ12815 778 aa17.44■□□□□ 0.38
GAPDH-210ENST00000496049 VGLL4Q14135 290 aa17.44■□□□□ 0.38
GAPDH-210ENST00000496049 RAB11FIP4Q86YS3 637 aa17.44■□□□□ 0.38
GAPDH-210ENST00000496049 CCDC144CPQ8IYA2 1237 aa17.44■□□□□ 0.38
GAPDH-210ENST00000496049 NECAB1Q8N987 351 aa17.44■□□□□ 0.38
GAPDH-210ENST00000496049 FANCBQ8NB91 859 aa17.44■□□□□ 0.38
GAPDH-210ENST00000496049 GMCL1P1Q8NEA9 526 aa17.44■□□□□ 0.38
GAPDH-210ENST00000496049 DPF3Q92784 378 aa17.44■□□□□ 0.38
GAPDH-210ENST00000496049 ZNF333Q96JL9 665 aa17.44■□□□□ 0.38
GAPDH-210ENST00000496049 LLPHQ9BRT6 129 aaKnown RBP17.44■□□□□ 0.38
GAPDH-210ENST00000496049 MTMR7Q9Y216 660 aa17.44■□□□□ 0.38
GAPDH-210ENST00000496049 KIF3AQ9Y496 699 aa17.44■□□□□ 0.38
GAPDH-210ENST00000496049 PARP1P09874 1014 aaKnown RBP17.43■□□□□ 0.38
GAPDH-210ENST00000496049 PTPRAP18433 802 aa17.43■□□□□ 0.38
GAPDH-210ENST00000496049 RXRAP19793 462 aa17.43■□□□□ 0.38
GAPDH-210ENST00000496049 JAG1P78504 1218 aa17.43■□□□□ 0.38
GAPDH-210ENST00000496049 GRM4Q14833 912 aa17.43■□□□□ 0.38
GAPDH-210ENST00000496049 ASPRV1Q53RT3 343 aa17.43■□□□□ 0.38
GAPDH-210ENST00000496049 DCAF4Q8WV16 495 aa17.43■□□□□ 0.38
GAPDH-210ENST00000496049 ERO1AQ96HE7 468 aa17.43■□□□□ 0.38
GAPDH-210ENST00000496049 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.43■□□□□ 0.38
GAPDH-210ENST00000496049 ISY1Q9ULR0 285 aaKnown RBP17.43■□□□□ 0.38
GAPDH-210ENST00000496049 FZD1Q9UP38 647 aa17.43■□□□□ 0.38
GAPDH-210ENST00000496049 SMC3Q9UQE7 1217 aa17.43■□□□□ 0.38
GAPDH-210ENST00000496049 LAMA3Q16787 3333 aa17.43■□□□□ 0.38
GAPDH-210ENST00000496049 USP14P54578 494 aa17.42■□□□□ 0.38
GAPDH-210ENST00000496049 CCDC96Q2M329 555 aa17.42■□□□□ 0.38
GAPDH-210ENST00000496049 GPATCH4Q5T3I0 446 aaKnown RBP17.42■□□□□ 0.38
GAPDH-210ENST00000496049 TRIM22Q8IYM9 498 aa17.42■□□□□ 0.38
GAPDH-210ENST00000496049 LZTS2Q9BRK4 669 aa17.42■□□□□ 0.38
GAPDH-210ENST00000496049 WDR18Q9BV38 432 aa17.42■□□□□ 0.38
GAPDH-210ENST00000496049 EFCC1Q9HA90 598 aa17.42■□□□□ 0.38
GAPDH-210ENST00000496049 NCOA5Q9HCD5 579 aaKnown RBP17.42■□□□□ 0.38
GAPDH-210ENST00000496049 TMX2Q9Y320 296 aa17.42■□□□□ 0.38
GAPDH-210ENST00000496049 SNCAIPQ9Y6H5 919 aa17.42■□□□□ 0.38
GAPDH-210ENST00000496049 USP17L10C9JJH3 530 aa17.41■□□□□ 0.38
GAPDH-210ENST00000496049 ALDH1A1P00352 501 aa17.41■□□□□ 0.38
GAPDH-210ENST00000496049 PDHBP11177 359 aa17.41■□□□□ 0.38
GAPDH-210ENST00000496049 SLC1A4P43007 532 aa17.41■□□□□ 0.38
GAPDH-210ENST00000496049 HMGN5P82970 282 aaKnown RBP17.41■□□□□ 0.38
GAPDH-210ENST00000496049 SLFN13Q68D06 897 aa17.41■□□□□ 0.38
GAPDH-210ENST00000496049 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.41■□□□□ 0.38
GAPDH-210ENST00000496049 ZNF280CQ8ND82 737 aa17.41■□□□□ 0.38
GAPDH-210ENST00000496049 LPAR1Q92633 364 aa17.41■□□□□ 0.38
GAPDH-210ENST00000496049 VCPKMTQ9H867 229 aa17.41■□□□□ 0.38
GAPDH-210ENST00000496049 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.41■□□□□ 0.38
GAPDH-210ENST00000496049 PHIPQ8WWQ0 1821 aa17.41■□□□□ 0.38
GAPDH-210ENST00000496049 F5H6K3 240 aa17.4■□□□□ 0.38
GAPDH-210ENST00000496049 NDUFB10O96000 172 aa17.4■□□□□ 0.38
GAPDH-210ENST00000496049 SLC4A3P48751 1232 aa17.4■□□□□ 0.38
GAPDH-210ENST00000496049 CAP1Q01518 475 aa17.4■□□□□ 0.38
GAPDH-210ENST00000496049 AKAP17AQ02040 695 aaKnown RBP17.4■□□□□ 0.38
GAPDH-210ENST00000496049 KLRC3Q07444 240 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms